FFCP PHASE1:Hg19::chr20:60795326..60795340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11255 | |EntrezGene=11255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5184 | |HGNC=5184 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5N1 | |UniProt=Q9Y5N1 | ||
|association_with_transcript=-3bp_to_ENST00000317393,ENST00000370797,NM_007232,uc002ycf.2,uc002ycg.2,uc002ych.2,uc002yci.2_5end | |association_with_transcript=-3bp_to_ENST00000317393,ENST00000370797,NM_007232,uc002ycf.2,uc002ycg.2,uc002ych.2,uc002yci.2_5end | ||
|cluster_id=chr20:60795326..60795340,- | |||
|coexpression_cluster_id=C1482 | |||
|description=CAGE_peak_1_at_HRH3_5end | |description=CAGE_peak_1_at_HRH3_5end | ||
|id=chr20:60795326..60795340,- | |id=chr20:60795326..60795340,- | ||
|ontology_enrichment_celltype=CL:0000540!5.92e-09!6;CL:0000031!5.92e-09!6;CL:0000404!5.92e-09!6;CL:0002322!9.35e-08!5 | |ontology_enrichment_celltype=CL:0000540!5.92e-09!6;CL:0000031!5.92e-09!6;CL:0000404!5.92e-09!6;CL:0002322!9.35e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.91e-11;5!CL:0000540;1.01e-09;6!CL:0000404;1.01e-09;6!CL:0002321;4.60e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.01e-11,5;CL:0000540,1.06e-09,6;CL:0000031,1.06e-09,6;CL:0000404,1.06e-09,6;CL:0000047,3.41e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.33e-17;82!CL:0000031;1.01e-09;6!UBERON:0006215;2.95e-09;3!UBERON:0006241;1.72e-07;3!UBERON:0003057;1.72e-07;3!UBERON:0010122;5.77e-07;2 | |||
|ontology_enrichment_disease=DOID:169!6.87e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:169;4.66e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,4.66e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001017!7.36e-60!82;UBERON:0000073!2.23e-59!94;UBERON:0001016!2.23e-59!94;UBERON:0005743!2.96e-58!86;UBERON:0001049!5.96e-57!57;UBERON:0005068!5.96e-57!57;UBERON:0006241!5.96e-57!57;UBERON:0007135!5.96e-57!57;UBERON:0000955!6.09e-48!69;UBERON:0006238!6.09e-48!69;UBERON:0002616!3.11e-47!59;UBERON:0002780!9.45e-43!41;UBERON:0001890!9.45e-43!41;UBERON:0006240!9.45e-43!41;UBERON:0003075!1.51e-42!86;UBERON:0007284!1.51e-42!86;UBERON:0003080!1.85e-41!42;UBERON:0002346!1.87e-41!90;UBERON:0001869!2.08e-38!32;UBERON:0001893!2.43e-38!34;UBERON:0002020!3.25e-38!34;UBERON:0003528!3.25e-38!34;UBERON:0002791!8.33e-37!33;UBERON:0004121!1.45e-32!169;UBERON:0000924!2.29e-32!173;UBERON:0006601!2.29e-32!173;UBERON:0002619!8.29e-32!22;UBERON:0007023!2.61e-30!115;UBERON:0003056!4.14e-30!61;UBERON:0001950!5.98e-29!20;UBERON:0000956!3.04e-27!25;UBERON:0000203!3.04e-27!25;UBERON:0000033!1.40e-26!123;UBERON:0000153!1.42e-25!129;UBERON:0007811!1.42e-25!129;UBERON:0003076!4.97e-16!15;UBERON:0003057!4.97e-16!15;UBERON:0002420!1.56e-12!9;UBERON:0007245!1.56e-12!9;UBERON:0010009!1.56e-12!9;UBERON:0010011!1.56e-12!9;UBERON:0000454!1.56e-12!9;UBERON:0004733!2.32e-12!12;UBERON:0002028!2.32e-12!12;UBERON:0007277!2.32e-12!12;UBERON:0002308!2.35e-12!9;UBERON:0000125!2.35e-12!9;UBERON:0004732!3.31e-11!13;UBERON:0000025!9.94e-11!194;UBERON:0000200!1.06e-10!6;UBERON:0001871!4.49e-10!7;UBERON:0009663!1.23e-09!7;UBERON:0000349!5.10e-09!5;UBERON:0002021!7.42e-09!5;UBERON:0001872!9.00e-09!5;UBERON:0002680!1.33e-08!9;UBERON:0001895!1.33e-08!9;UBERON:0010092!1.33e-08!9;UBERON:0000064!1.49e-08!219;UBERON:0000369!2.36e-08!4;UBERON:0002435!2.36e-08!4;UBERON:0000204!2.36e-08!4;UBERON:0010082!2.36e-08!4;UBERON:0004111!4.64e-08!241;UBERON:0000483!9.37e-08!309;UBERON:0000922!1.41e-07!612;UBERON:0000119!1.61e-07!312;UBERON:0000475!3.20e-07!365;UBERON:0002298!6.06e-07!8;UBERON:0000477!7.11e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.75e-51;32!UBERON:0001893;3.14e-49;34!UBERON:0003528;1.33e-48;34!UBERON:0002020;1.33e-48;34!UBERON:0002791;1.50e-47;32!UBERON:0002619;2.78e-45;22!UBERON:0002780;2.91e-41;41!UBERON:0001890;2.91e-41;41!UBERON:0001950;8.11e-41;20!UBERON:0000073;1.41e-39;53!UBERON:0002616;1.41e-39;53!UBERON:0000956;2.47e-39;25!UBERON:0000203;2.47e-39;25!UBERON:0000955;2.06e-29;68!UBERON:0001017;3.22e-29;75!UBERON:0001016;4.91e-25;83!UBERON:0002420;5.62e-19;9!UBERON:0007245;5.62e-19;9!UBERON:0010009;5.62e-19;9!UBERON:0010011;5.62e-19;9!UBERON:0000454;5.62e-19;9!UBERON:0000125;1.04e-18;9!UBERON:0002308;1.04e-18;9!UBERON:0000200;7.12e-16;6!UBERON:0004733;9.70e-16;12!UBERON:0002028;9.70e-16;12!UBERON:0009663;1.88e-14;7!UBERON:0004732;2.19e-14;13!UBERON:0002298;4.16e-14;6!UBERON:0000349;3.32e-13;5!UBERON:0002021;5.17e-13;5!UBERON:0001871;7.12e-13;6!UBERON:0000369;3.53e-12;4!UBERON:0002435;3.53e-12;4!UBERON:0000204;3.53e-12;4!UBERON:0007023;9.19e-12;114!UBERON:0011216;3.27e-10;132!UBERON:0002680;4.28e-10;9!UBERON:0001895;4.28e-10;9!UBERON:0005383;1.26e-09;3!UBERON:0005382;1.26e-09;3!UBERON:0001872;6.08e-09;5!UBERON:0001870;7.08e-09;3!UBERON:0000988;5.21e-08;3!UBERON:0001896;9.03e-08;3!UBERON:0005290;9.03e-08;3!UBERON:0002240;1.72e-07;3!UBERON:0005174;1.72e-07;3!UBERON:0001137;1.72e-07;3!UBERON:0001873;5.77e-07;2!UBERON:0001897;9.21e-07;2!UBERON:0010225;9.21e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.50e-79,89;UBERON:0001017,9.11e-79,81;UBERON:0001049,1.01e-78,56;UBERON:0005068,1.01e-78,56;UBERON:0006241,1.01e-78,56;UBERON:0007135,1.01e-78,56;UBERON:0000073,1.23e-72,53;UBERON:0002616,1.23e-72,53;UBERON:0000955,1.43e-65,68;UBERON:0006238,1.43e-65,68;UBERON:0002780,2.05e-57,41;UBERON:0001890,2.05e-57,41;UBERON:0003080,2.05e-57,41;UBERON:0006240,2.05e-57,41;UBERON:0001893,7.59e-57,34;UBERON:0003528,1.19e-56,34;UBERON:0002020,1.19e-56,34;UBERON:0001869,1.29e-56,32;UBERON:0003075,7.68e-53,82;UBERON:0007284,7.68e-53,82;UBERON:0002791,2.60e-52,32;UBERON:0002346,8.10e-50,86;UBERON:0002619,3.47e-45,22;UBERON:0010371,3.68e-43,104;UBERON:0001950,1.01e-40,20;UBERON:0000956,3.00e-39,25;UBERON:0000203,3.00e-39,25;UBERON:0003056,1.92e-38,61;UBERON:0004121,1.14e-37,171;UBERON:0000924,1.14e-37,171;UBERON:0006601,1.14e-37,171;UBERON:0007023,3.44e-35,114;UBERON:0010314,7.58e-30,132;UBERON:0011216,5.35e-29,223;UBERON:0003076,2.26e-21,15;UBERON:0003057,2.26e-21,15;UBERON:0002420,5.43e-19,9;UBERON:0007245,5.43e-19,9;UBERON:0010009,5.43e-19,9;UBERON:0010011,5.43e-19,9;UBERON:0000454,5.43e-19,9;UBERON:0000125,1.04e-18,9;UBERON:0002308,1.04e-18,9;UBERON:0000025,1.70e-16,192;UBERON:0000200,7.60e-16,6;UBERON:0004733,9.53e-16,12;UBERON:0002028,9.53e-16,12;UBERON:0007277,9.53e-16,12;UBERON:0009663,1.86e-14,7;UBERON:0004732,2.16e-14,13;UBERON:0002298,4.11e-14,6;UBERON:0000349,3.24e-13,5;UBERON:0002021,5.80e-13,5;UBERON:0001871,7.59e-13,6;UBERON:0000369,3.53e-12,4;UBERON:0002435,3.53e-12,4;UBERON:0000204,3.53e-12,4;UBERON:0010082,3.53e-12,4;UBERON:0004111,7.06e-11,240;UBERON:0002680,4.24e-10,9;UBERON:0001895,4.24e-10,9;UBERON:0010092,4.24e-10,9;UBERON:0005383,1.26e-09,3;UBERON:0005382,1.26e-09,3;UBERON:0000483,1.52e-09,306;UBERON:0000119,2.47e-09,309;UBERON:0001872,6.33e-09,5;UBERON:0001870,6.99e-09,3;UBERON:0000988,5.21e-08,3;UBERON:0001896,8.93e-08,3;UBERON:0005290,8.93e-08,3;UBERON:0010096,8.93e-08,3;UBERON:0002240,1.66e-07,3;UBERON:0005174,1.66e-07,3;UBERON:0001137,1.66e-07,3;UBERON:0000922,4.10e-07,592;UBERON:0001873,5.77e-07,2;UBERON:0010122,5.77e-07,2;UBERON:0001897,8.97e-07,2;UBERON:0010225,8.97e-07,2 | |||
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| ||
|short_description=p1@HRH3 | |short_description=p1@HRH3 | ||
}} | }} |
Latest revision as of 10:11, 17 September 2015
Short description: | p1@HRH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HRH3_5end |
Coexpression cluster: | C1482_caudate_anaplastic_putamen_thalamus_small_diencephalon_nucleus |
Association with transcript: | -3bp_to_ENST00000317393, ENST00000370797, NM_007232, uc002ycf.2, uc002ycg.2, uc002ych.2, uc002yci.2_5end |
EntrezGene: | HRH3 |
HGNC: | 5184 |
UniProt: | Q9Y5N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.01e-11 | 5 |
neuron | 1.06e-09 | 6 |
neuroblast | 1.06e-09 | 6 |
electrically signaling cell | 1.06e-09 | 6 |
neuronal stem cell | 3.41e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 4.66e-07 | 6 |