FFCP PHASE1:Hg19::chr8:22014339..22014342,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:22014339..22014342,-
|short_description=p4@LGI3
|description=CAGE_peak_4_at_LGI3_5end
|association_with_transcript=1bp_to_NM_139278,uc003xav.2,uc010ltu.2_5...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=203190 | |EntrezGene=203190 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18711 | |HGNC=18711 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N145 | |UniProt=Q8N145 | ||
|association_with_transcript=1bp_to_NM_139278,uc003xav.2,uc010ltu.2_5end | |||
|cluster_id=chr8:22014339..22014342,- | |||
|coexpression_cluster_id=C2076 | |||
|description=CAGE_peak_4_at_LGI3_5end | |||
|id=chr8:22014339..22014342,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000148;4.84e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,6.34e-07,10;CL:0000541,6.34e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.12e-10;82!UBERON:0005425;8.44e-09;1!UBERON:0006222;2.20e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.16e-52!57;UBERON:0005068!6.16e-52!57;UBERON:0006241!6.16e-52!57;UBERON:0007135!6.16e-52!57;UBERON:0007023!3.65e-50!115;UBERON:0001017!8.88e-44!82;UBERON:0005743!1.26e-43!86;UBERON:0002616!4.13e-41!59;UBERON:0000073!8.57e-41!94;UBERON:0001016!8.57e-41!94;UBERON:0000955!1.76e-40!69;UBERON:0006238!1.76e-40!69;UBERON:0003075!2.06e-39!86;UBERON:0007284!2.06e-39!86;UBERON:0002346!3.56e-37!90;UBERON:0001893!5.61e-36!34;UBERON:0002020!1.14e-35!34;UBERON:0003528!1.14e-35!34;UBERON:0002780!1.05e-34!41;UBERON:0001890!1.05e-34!41;UBERON:0006240!1.05e-34!41;UBERON:0003080!1.01e-33!42;UBERON:0002791!1.11e-33!33;UBERON:0001869!1.90e-31!32;UBERON:0002619!7.68e-27!22;UBERON:0000153!1.47e-26!129;UBERON:0007811!1.47e-26!129;UBERON:0001950!5.16e-26!20;UBERON:0000033!4.97e-24!123;UBERON:0000956!3.17e-23!25;UBERON:0000203!3.17e-23!25;UBERON:0003056!4.13e-23!61;UBERON:0004121!2.31e-22!169;UBERON:0000924!1.44e-21!173;UBERON:0006601!1.44e-21!173;UBERON:0003076!2.36e-19!15;UBERON:0003057!2.36e-19!15;UBERON:0002298!2.91e-16!8;UBERON:0004732!2.42e-15!13;UBERON:0002308!2.82e-14!9;UBERON:0000125!2.82e-14!9;UBERON:0004733!4.72e-13!12;UBERON:0002028!4.72e-13!12;UBERON:0007277!4.72e-13!12;UBERON:0000025!2.50e-12!194;UBERON:0000477!1.33e-11!286;UBERON:0000200!1.33e-11!6;UBERON:0004111!2.38e-11!241;UBERON:0002420!1.52e-10!9;UBERON:0007245!1.52e-10!9;UBERON:0010009!1.52e-10!9;UBERON:0010011!1.52e-10!9;UBERON:0000454!1.52e-10!9;UBERON:0000064!3.36e-10!219;UBERON:0009663!9.32e-10!7;UBERON:0000483!2.92e-09!309;UBERON:0000988!3.30e-09!3;UBERON:0002021!3.67e-09!5;UBERON:0006331!3.88e-09!3;UBERON:0001872!3.91e-09!5;UBERON:0000119!4.68e-09!312;UBERON:0002771!1.01e-08!3;UBERON:0000475!1.05e-08!365;UBERON:0002240!1.06e-08!3;UBERON:0001896!1.09e-08!3;UBERON:0005290!1.09e-08!3;UBERON:0010096!1.09e-08!3;UBERON:0001871!2.04e-08!7;UBERON:0002680!3.10e-07!9;UBERON:0001895!3.10e-07!9;UBERON:0010092!3.10e-07!9;UBERON:0000062!3.51e-07!511;UBERON:0005162!4.50e-07!2;UBERON:0000122!4.50e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;8.29e-37;34!UBERON:0002780;4.99e-34;41!UBERON:0001890;4.99e-34;41!UBERON:0002791;5.30e-31;32!UBERON:0001869;4.99e-30;32!UBERON:0003528;5.94e-30;34!UBERON:0002020;5.94e-30;34!UBERON:0000073;1.72e-28;53!UBERON:0002616;1.72e-28;53!UBERON:0002619;8.79e-24;22!UBERON:0000956;6.97e-21;25!UBERON:0000203;6.97e-21;25!UBERON:0001950;9.42e-21;20!UBERON:0002420;2.10e-19;9!UBERON:0000125;2.10e-19;9!UBERON:0007245;2.10e-19;9!UBERON:0002308;2.10e-19;9!UBERON:0010009;2.10e-19;9!UBERON:0010011;2.10e-19;9!UBERON:0000454;2.10e-19;9!UBERON:0009663;2.62e-16;7!UBERON:0001017;3.72e-16;75!UBERON:0005162;4.96e-16;2!UBERON:0000122;4.96e-16;2!UBERON:0000955;7.80e-15;68!UBERON:0007023;1.39e-14;114!UBERON:0002021;1.67e-13;5!UBERON:0001016;2.10e-13;83!UBERON:0000349;2.91e-13;5!UBERON:0002298;2.43e-11;6!UBERON:0000988;1.27e-10;3!UBERON:0004732;4.21e-09;13!UBERON:0002336;6.02e-09;1!UBERON:0011215;6.02e-09;1!UBERON:0001018;6.02e-09;1!UBERON:0002473;6.02e-09;1!UBERON:0005340;6.02e-09;1!UBERON:0003544;6.02e-09;1!UBERON:0005970;6.02e-09;1!UBERON:0002316;6.02e-09;1!UBERON:0001020;6.02e-09;1!UBERON:0002437;6.02e-09;1!UBERON:0002581;8.44e-09;1!UBERON:0002902;8.44e-09;1!UBERON:0000941;8.44e-09;1!UBERON:0002171;8.44e-09;1!UBERON:0001785;8.44e-09;1!UBERON:0002464;8.44e-09;1!UBERON:0004904;8.44e-09;1!UBERON:0001021;8.44e-09;1!UBERON:0006518;8.44e-09;1!UBERON:0008949;8.44e-09;1!UBERON:0009899;8.44e-09;1!UBERON:0000101;8.44e-09;1!UBERON:0007190;8.44e-09;1!UBERON:0002167;8.44e-09;1!UBERON:0001882;2.20e-08;1!UBERON:0001874;2.20e-08;1!UBERON:0002038;2.20e-08;1!UBERON:0009661;2.20e-08;1!UBERON:0002950;2.20e-08;1!UBERON:0005403;2.20e-08;1!UBERON:0001891;2.20e-08;1!UBERON:0000369;5.61e-08;4!UBERON:0002435;5.61e-08;4!UBERON:0000204;5.61e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.05e-51,56;UBERON:0005068,3.05e-51,56;UBERON:0006241,3.05e-51,56;UBERON:0007135,3.05e-51,56;UBERON:0000073,5.64e-49,53;UBERON:0002616,5.64e-49,53;UBERON:0002780,1.42e-45,41;UBERON:0001890,1.42e-45,41;UBERON:0003080,1.42e-45,41;UBERON:0006240,1.42e-45,41;UBERON:0000955,2.51e-45,68;UBERON:0006238,2.51e-45,68;UBERON:0001893,6.92e-43,34;UBERON:0001017,2.04e-41,81;UBERON:0001016,1.24e-40,89;UBERON:0003075,1.11e-37,82;UBERON:0007284,1.11e-37,82;UBERON:0003528,6.29e-37,34;UBERON:0002020,6.29e-37,34;UBERON:0002346,9.12e-36,86;UBERON:0007023,4.59e-35,114;UBERON:0001869,7.48e-34,32;UBERON:0003056,8.61e-34,61;UBERON:0002791,9.34e-34,32;UBERON:0010371,5.90e-29,104;UBERON:0002619,1.31e-23,22;UBERON:0010314,5.14e-22,132;UBERON:0000956,9.93e-21,25;UBERON:0000203,9.93e-21,25;UBERON:0001950,1.27e-20,20;UBERON:0000125,1.58e-19,9;UBERON:0002308,1.58e-19,9;UBERON:0004121,1.66e-19,171;UBERON:0000924,1.66e-19,171;UBERON:0006601,1.66e-19,171;UBERON:0002420,2.62e-19,9;UBERON:0007245,2.62e-19,9;UBERON:0010009,2.62e-19,9;UBERON:0010011,2.62e-19,9;UBERON:0000454,2.62e-19,9;UBERON:0009663,2.33e-16,7;UBERON:0005162,3.83e-16,2;UBERON:0000122,3.83e-16,2;UBERON:0011216,1.86e-15,223;UBERON:0000025,6.78e-14,192;UBERON:0002021,1.27e-13,5;UBERON:0000349,4.74e-13,5;UBERON:0002298,1.74e-11,6;UBERON:0000988,1.05e-10,3;UBERON:0004111,2.63e-10,240;UBERON:0004732,3.19e-09,13;UBERON:0002336,6.03e-09,1;UBERON:0011215,6.03e-09,1;UBERON:0001018,6.03e-09,1;UBERON:0002473,6.03e-09,1;UBERON:0005340,6.03e-09,1;UBERON:0003544,6.03e-09,1;UBERON:0005970,6.03e-09,1;UBERON:0002316,6.03e-09,1;UBERON:0001020,6.03e-09,1;UBERON:0002437,6.03e-09,1;UBERON:0000941,6.50e-09,1;UBERON:0001785,6.50e-09,1;UBERON:0002464,6.50e-09,1;UBERON:0004904,6.50e-09,1;UBERON:0001021,6.50e-09,1;UBERON:0003902,6.50e-09,1;UBERON:0005425,6.50e-09,1;UBERON:0002902,7.01e-09,1;UBERON:0009899,7.01e-09,1;UBERON:0007190,7.56e-09,1;UBERON:0002171,8.15e-09,1;UBERON:0006518,8.15e-09,1;UBERON:0008949,8.15e-09,1;UBERON:0000101,8.15e-09,1;UBERON:0002167,8.15e-09,1;UBERON:0002581,9.46e-09,1;UBERON:0002038,1.37e-08,1;UBERON:0009661,1.37e-08,1;UBERON:0002950,1.37e-08,1;UBERON:0001891,1.37e-08,1;UBERON:0009616,1.37e-08,1;UBERON:0010286,1.37e-08,1;UBERON:0001882,2.13e-08,1;UBERON:0005403,2.13e-08,1;UBERON:0001874,2.46e-08,1;UBERON:0000483,3.69e-08,306;UBERON:0000119,4.87e-08,309;UBERON:0000369,5.82e-08,4;UBERON:0002435,5.82e-08,4;UBERON:0000204,5.82e-08,4;UBERON:0010082,5.82e-08,4;UBERON:0003076,6.09e-08,15;UBERON:0003057,6.09e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,0,1.13110241973656,0.600686115687835,6.85983438313388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.04089815956073,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51587590970536,0,1.1713222286267,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,1.2029051231617,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,1.23214841002794,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.775697738169303,1.71902382265497,0,0,0.106787412567695,0,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.625954653532499,0.573409195690071,0.554645257684261,1.73869928235874,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41304295212211,0,1.43670473151436,1.43581454968528,0.252071696221718,2.55881834117606,0.645902582527404,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,0.781078098613847,0.620060389503552,1.39514782426595,0,0,0,0,0,0,0,0,0,0,0,0,2.37894065418911,2.36781984826257,0.472775363535873,0,0.156986185701028,1.25692471932802,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,1.96308467114945,0.594092800654172,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,1.86341458096887,0,2.3117106664911,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,1.44806194206653,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,0,1.13110241973656,0.600686115687835,6.85983438313388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.04089815956073,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.361789315876224,0,0.110579259931225,0.591095237907095,0.658156191461918,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.51587590970536,0,1.1713222286267,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,1.2029051231617,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,1.23214841002794,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22583065500418,0,0,0,0,0,0.971992906528395,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0.775697738169303,1.71902382265497,0,0,0.106787412567695,0,2.48543433208317,0,0,0,0,0,0,0,0,0,0,0.976210119215705,0.625954653532499,0.573409195690071,0.554645257684261,1.73869928235874,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41304295212211,0,1.43670473151436,1.43581454968528,0.252071696221718,2.55881834117606,0.645902582527404,2.85538840518309,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4988906308806,0.781078098613847,0.620060389503552,1.39514782426595,0,0,0,0,0,0,0,0,0,0,0,0,2.37894065418911,2.36781984826257,0.472775363535873,0,0.156986185701028,1.25692471932802,0,0,0,0,0.857718530119876,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0.218559560503957,0,0,0,1.96308467114945,0.594092800654172,0.4226557275834,0,0,0,0.0999411559249289,0,0,0,0,0,1.86341458096887,0,2.3117106664911,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,1.44806194206653,0.213233981900981,0.23806443146374,0,0.0620747142958579,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0,0,0.332660356546013,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p4@LGI3 | |||
}} | }} |
Latest revision as of 10:18, 17 September 2015
Short description: | p4@LGI3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LGI3_5end |
Coexpression cluster: | C2076_Melanocyte_corpus_brain_occipital_temporal_postcentral_pons |
Association with transcript: | 1bp_to_NM_139278, uc003xav.2, uc010ltu.2_5end |
EntrezGene: | LGI3 |
HGNC: | 18711 |
UniProt: | Q8N145 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 6.34e-07 | 10 |
melanoblast | 6.34e-07 | 10 |