FFCP PHASE1:Hg19::chr12:132851982..132851995,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100130238 | |EntrezGene=100130238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000543317,NR_024563,uc010tbp.1_5end | |||
|cluster_id=chr12:132851982..132851995,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_1_at_LOC100130238_5end | |||
|id=chr12:132851982..132851995,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.72e-75;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.98e-25!86;UBERON:0001017!4.08e-25!82;UBERON:0000073!4.34e-25!94;UBERON:0001016!4.34e-25!94;UBERON:0000955!1.06e-23!69;UBERON:0006238!1.06e-23!69;UBERON:0002616!6.42e-20!59;UBERON:0002346!2.45e-19!90;UBERON:0001049!3.66e-19!57;UBERON:0005068!3.66e-19!57;UBERON:0006241!3.66e-19!57;UBERON:0007135!3.66e-19!57;UBERON:0003075!9.28e-18!86;UBERON:0007284!9.28e-18!86;UBERON:0002619!3.06e-17!22;UBERON:0001950!1.19e-16!20;UBERON:0000033!1.29e-15!123;UBERON:0000153!2.10e-15!129;UBERON:0007811!2.10e-15!129;UBERON:0007023!2.32e-15!115;UBERON:0002020!2.46e-15!34;UBERON:0003528!2.46e-15!34;UBERON:0000924!4.68e-15!173;UBERON:0006601!4.68e-15!173;UBERON:0000956!8.00e-15!25;UBERON:0000203!8.00e-15!25;UBERON:0001869!1.10e-14!32;UBERON:0004121!8.53e-14!169;UBERON:0001893!1.33e-13!34;UBERON:0002791!3.54e-12!33;UBERON:0002780!3.68e-12!41;UBERON:0001890!3.68e-12!41;UBERON:0006240!3.68e-12!41;UBERON:0004733!6.19e-12!12;UBERON:0002028!6.19e-12!12;UBERON:0007277!6.19e-12!12;UBERON:0003080!8.97e-12!42;UBERON:0004732!6.81e-11!13;UBERON:0003056!4.20e-10!61;UBERON:0000064!1.10e-09!219;UBERON:0002680!1.18e-09!9;UBERON:0001895!1.18e-09!9;UBERON:0010092!1.18e-09!9;UBERON:0003076!3.14e-09!15;UBERON:0003057!3.14e-09!15;UBERON:0001872!5.09e-08!5;UBERON:0000988!1.17e-07!3;UBERON:0002298!5.12e-07!8;UBERON:0000200!8.37e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.90e-38;6!UBERON:0002680;1.17e-25;9!UBERON:0001895;1.17e-25;9!UBERON:0004733;1.87e-19;12!UBERON:0002028;1.87e-19;12!UBERON:0004732;5.11e-18;13!UBERON:0002106;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.90e-38,6;UBERON:0006215,4.90e-38,6;UBERON:0002680,1.17e-25,9;UBERON:0001895,1.17e-25,9;UBERON:0010092,1.17e-25,9;UBERON:0004733,1.87e-19,12;UBERON:0002028,1.87e-19,12;UBERON:0007277,1.87e-19,12;UBERON:0004732,5.11e-18,13;UBERON:0003076,1.02e-15,15;UBERON:0003057,1.02e-15,15;UBERON:0002106,1.41e-09,3;UBERON:0004854,1.41e-09,3;UBERON:0009034,1.41e-09,3;UBERON:0002095,1.41e-09,3;UBERON:0004782,1.41e-09,3;UBERON:0003281,1.41e-09,3;UBERON:0009664,1.41e-09,3;UBERON:0002296,1.41e-09,3;UBERON:0005602,1.41e-09,3;UBERON:0001179,1.41e-09,3;UBERON:0006293,1.41e-09,3;UBERON:0000073,8.16e-08,53;UBERON:0002616,8.16e-08,53;UBERON:0001049,2.02e-07,56;UBERON:0005068,2.02e-07,56;UBERON:0006241,2.02e-07,56;UBERON:0007135,2.02e-07,56;UBERON:0001016,5.59e-07,89 | |||
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| ||
|short_description=p1@LOC100130238 | |||
}} | }} |
Latest revision as of 10:21, 17 September 2015
Short description: | p1@LOC100130238 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100130238_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 5bp_to_ENST00000543317, NR_024563, uc010tbp.1_5end |
EntrezGene: | LOC100130238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.90e-38 | 6 |
rhombic lip | 4.90e-38 | 6 |
regional part of metencephalon | 1.17e-25 | 9 |
metencephalon | 1.17e-25 | 9 |
future metencephalon | 1.17e-25 | 9 |
segmental subdivision of hindbrain | 1.87e-19 | 12 |
hindbrain | 1.87e-19 | 12 |
presumptive hindbrain | 1.87e-19 | 12 |
segmental subdivision of nervous system | 5.11e-18 | 13 |
posterior neural tube | 1.02e-15 | 15 |
chordal neural plate | 1.02e-15 | 15 |
spleen | 1.41e-09 | 3 |
gastrointestinal system mesentery | 1.41e-09 | 3 |
stomach region | 1.41e-09 | 3 |
mesentery | 1.41e-09 | 3 |
gastrointestinal system serosa | 1.41e-09 | 3 |
mesentery of stomach | 1.41e-09 | 3 |
gut mesentery | 1.41e-09 | 3 |
dorsal mesentery | 1.41e-09 | 3 |
dorsal mesogastrium | 1.41e-09 | 3 |
peritoneal cavity | 1.41e-09 | 3 |
spleen primordium | 1.41e-09 | 3 |
regional part of nervous system | 8.16e-08 | 53 |
regional part of brain | 8.16e-08 | 53 |
neural tube | 2.02e-07 | 56 |
neural rod | 2.02e-07 | 56 |
future spinal cord | 2.02e-07 | 56 |
neural keel | 2.02e-07 | 56 |
nervous system | 5.59e-07 | 89 |