FFCP PHASE1:Hg19::chr8:22020106..22020124,+: Difference between revisions
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|id=chr8:22020106..22020124,+
|short_description=p5@SFTPC
|description=CAGE_peak_5_at_SFTPC_5end
|association_with_transcript=-467bp_to_ENST00000522630_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6440 | |EntrezGene=6440 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10802 | |HGNC=10802 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-467bp_to_ENST00000522630_5end | |||
|cluster_id=chr8:22020106..22020124,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_5_at_SFTPC_5end | |||
|id=chr8:22020106..22020124,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.69e-13;29!UBERON:0001041;9.49e-13;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.16e-26!1;UBERON:0006518!2.16e-26!1;UBERON:0008949!2.16e-26!1;UBERON:0000101!2.16e-26!1;UBERON:0002167!2.16e-26!1;UBERON:0002360!1.37e-13!2;UBERON:0000094!1.37e-13!2;UBERON:0007645!1.37e-13!2;UBERON:0001875!1.55e-13!2;UBERON:0006514!1.55e-13!2;UBERON:0002048!6.05e-11!22;UBERON:0000117!6.05e-11!22;UBERON:0000171!6.05e-11!22;UBERON:0000170!6.05e-11!22;UBERON:0005597!6.05e-11!22;UBERON:0000118!6.05e-11!22;UBERON:0005157!2.97e-08!51;UBERON:0005178!2.65e-07!34;UBERON:0002224!2.65e-07!34;UBERON:0005181!4.12e-07!35;UBERON:0005153!9.30e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.62e-41;1!UBERON:0006518;6.62e-41;1!UBERON:0008949;6.62e-41;1!UBERON:0000101;6.62e-41;1!UBERON:0002167;6.62e-41;1!UBERON:0002048;4.60e-17;22!UBERON:0000117;4.60e-17;22!UBERON:0000171;4.60e-17;22!UBERON:0000170;4.60e-17;22!UBERON:0005178;3.58e-10;34!UBERON:0002224;3.58e-10;34!UBERON:0000065;3.06e-08;44!UBERON:0005181;4.10e-08;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.62e-41,1;UBERON:0006518,6.62e-41,1;UBERON:0008949,6.62e-41,1;UBERON:0000101,6.62e-41,1;UBERON:0002167,6.62e-41,1;UBERON:0002048,4.60e-17,22;UBERON:0000117,4.60e-17,22;UBERON:0000171,4.60e-17,22;UBERON:0000170,4.60e-17,22;UBERON:0005597,4.60e-17,22;UBERON:0000118,4.60e-17,22;UBERON:0005178,2.39e-11,34;UBERON:0002224,2.39e-11,34;UBERON:0005181,4.78e-11,35;UBERON:0005153,1.71e-10,37;UBERON:0008947,3.08e-10,38;UBERON:0003258,3.08e-10,38;UBERON:0005157,2.00e-08,47;UBERON:0000915,1.10e-07,52;UBERON:0000065,1.99e-07,54 | |||
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|short_description=p5@SFTPC | |||
}} | }} |
Latest revision as of 10:24, 17 September 2015
Short description: | p5@SFTPC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SFTPC_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -467bp_to_ENST00000522630_5end |
EntrezGene: | SFTPC |
HGNC: | 10802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.62e-41 | 1 |
right lung lobe | 6.62e-41 | 1 |
lower lobe of lung | 6.62e-41 | 1 |
lobe of lung | 6.62e-41 | 1 |
right lung | 6.62e-41 | 1 |
lung | 4.60e-17 | 22 |
respiratory tube | 4.60e-17 | 22 |
respiration organ | 4.60e-17 | 22 |
pair of lungs | 4.60e-17 | 22 |
lung primordium | 4.60e-17 | 22 |
lung bud | 4.60e-17 | 22 |
thoracic cavity element | 2.39e-11 | 34 |
thoracic cavity | 2.39e-11 | 34 |
thoracic segment organ | 4.78e-11 | 35 |
epithelial bud | 1.71e-10 | 37 |
respiratory primordium | 3.08e-10 | 38 |
endoderm of foregut | 3.08e-10 | 38 |
epithelial fold | 2.00e-08 | 47 |
thoracic segment of trunk | 1.10e-07 | 52 |
respiratory tract | 1.99e-07 | 54 |