FFCP PHASE1:Hg19::chr11:2405833..2405863,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:2405833..2405863,+
|short_description=p7@CD81
|description=CAGE_peak_7_at_CD81_5end
|association_with_transcript=-16bp_to_ENST00000527343_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=975 | |EntrezGene=975 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1701 | |HGNC=1701 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_ENST00000527343_5end | |||
|cluster_id=chr11:2405833..2405863,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_7_at_CD81_5end | |||
|id=chr11:2405833..2405863,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.30e-44!53;CL:0000051!1.30e-44!53;CL:0000838!4.27e-43!52;CL:0000945!2.09e-34!24;CL:0000826!2.09e-34!24;CL:0000236!6.73e-24!14;CL:0002087!4.04e-18!119;CL:0000738!5.42e-14!140;CL:0000791!7.16e-14!18;CL:0000789!7.16e-14!18;CL:0002420!7.16e-14!18;CL:0002419!7.16e-14!18;CL:0000790!7.16e-14!18;CL:0000084!1.30e-13!25;CL:0000827!1.30e-13!25;CL:0002031!2.81e-13!124;CL:0000625!1.05e-12!11;CL:0000037!3.52e-10!172;CL:0000566!3.52e-10!172;CL:0002032!2.26e-09!165;CL:0000837!2.26e-09!165;CL:0000988!6.80e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.27e-62;24!CL:0000236;1.25e-61;13!CL:0000542;3.54e-33;53!CL:0000625;4.03e-10;11!CL:0000791;1.39e-08;18!CL:0000789;1.39e-08;18!CL:0002419;1.39e-08;18!CL:0002087;2.22e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.76e-66,14;CL:0000945,1.26e-62,24;CL:0000826,1.26e-62,24;CL:0000542,2.52e-51,53;CL:0000051,2.52e-51,53;CL:0000838,4.80e-48,52;CL:0002087,2.88e-20,115;CL:0002031,1.98e-17,120;CL:0000738,2.84e-16,136;CL:0000817,2.00e-15,3;CL:0002032,3.77e-14,161;CL:0000837,3.77e-14,161;CL:0000037,2.55e-13,168;CL:0000988,2.39e-12,177;CL:0000785,5.95e-11,2;CL:0000955,5.95e-11,2;CL:0000818,5.95e-11,2;CL:0000954,5.95e-11,2;CL:0000816,5.95e-11,2;CL:0000625,4.07e-10,11;CL:0000791,1.44e-08,18;CL:0000789,1.44e-08,18;CL:0002420,1.44e-08,18;CL:0002419,1.44e-08,18;CL:0000790,1.44e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.54e-33;53!CL:0000954;7.05e-11;2!CL:0000790;1.39e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.14e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.17e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.16e-30!115;UBERON:0001049!9.95e-13!57;UBERON:0005068!9.95e-13!57;UBERON:0006241!9.95e-13!57;UBERON:0007135!9.95e-13!57;UBERON:0002616!4.46e-11!59;UBERON:0002780!2.41e-10!41;UBERON:0001890!2.41e-10!41;UBERON:0006240!2.41e-10!41;UBERON:0003080!5.71e-10!42;UBERON:0002020!1.31e-09!34;UBERON:0003528!1.31e-09!34;UBERON:0001893!2.04e-09!34;UBERON:0000955!4.38e-09!69;UBERON:0006238!4.38e-09!69;UBERON:0002298!1.00e-08!8;UBERON:0002791!1.02e-08!33;UBERON:0001017!1.12e-08!82;UBERON:0005743!1.50e-08!86;UBERON:0000178!1.59e-08!15;UBERON:0000179!1.59e-08!15;UBERON:0000463!1.59e-08!15;UBERON:0001869!6.02e-08!32;UBERON:0004177!1.57e-07!7;UBERON:0003075!3.26e-07!86;UBERON:0007284!3.26e-07!86;UBERON:0000073!5.05e-07!94;UBERON:0001016!5.05e-07!94;UBERON:0002308!9.61e-07!9;UBERON:0000125!9.61e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;4.54e-07;3!UBERON:0005290;4.54e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.08e-07,3;UBERON:0005290,4.08e-07,3;UBERON:0010096,4.08e-07,3 | |||
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| ||
|short_description=p7@CD81 | |||
}} | }} |
Latest revision as of 10:32, 17 September 2015
Short description: | p7@CD81 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD81_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -16bp_to_ENST00000527343_5end |
EntrezGene: | CD81 |
HGNC: | 1701 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.76e-66 | 14 |
lymphocyte of B lineage | 1.26e-62 | 24 |
pro-B cell | 1.26e-62 | 24 |
lymphocyte | 2.52e-51 | 53 |
common lymphoid progenitor | 2.52e-51 | 53 |
lymphoid lineage restricted progenitor cell | 4.80e-48 | 52 |
nongranular leukocyte | 2.88e-20 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-17 | 120 |
leukocyte | 2.84e-16 | 136 |
precursor B cell | 2.00e-15 | 3 |
hematopoietic oligopotent progenitor cell | 3.77e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.77e-14 | 161 |
hematopoietic stem cell | 2.55e-13 | 168 |
hematopoietic cell | 2.39e-12 | 177 |
mature B cell | 5.95e-11 | 2 |
pre-B-II cell | 5.95e-11 | 2 |
transitional stage B cell | 5.95e-11 | 2 |
small pre-B-II cell | 5.95e-11 | 2 |
immature B cell | 5.95e-11 | 2 |
CD8-positive, alpha-beta T cell | 4.07e-10 | 11 |
mature alpha-beta T cell | 1.44e-08 | 18 |
alpha-beta T cell | 1.44e-08 | 18 |
immature T cell | 1.44e-08 | 18 |
mature T cell | 1.44e-08 | 18 |
immature alpha-beta T cell | 1.44e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.08e-07 | 3 |
myelencephalon | 4.08e-07 | 3 |
future myelencephalon | 4.08e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.17e-08 | 10 |