FFCP PHASE1:Hg19::chr8:22022699..22022730,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=649 | |EntrezGene=649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1067 | |HGNC=1067 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000397816,ENST00000520970_5end | |association_with_transcript=0bp_to_ENST00000397816,ENST00000520970_5end | ||
|cluster_id=chr8:22022699..22022730,+ | |||
|description=CAGE_peak_2_at_BMP1_5end | |description=CAGE_peak_2_at_BMP1_5end | ||
|id=chr8:22022699..22022730,+ | |id=chr8:22022699..22022730,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.59e-19!180;CL:0000220!2.91e-18!246;CL:0002321!9.92e-18!248;CL:0000222!7.20e-11!119;CL:0000066!8.03e-11!254;CL:0000548!2.61e-10!679;CL:0000004!2.61e-10!679;CL:0000255!2.61e-10!679;CL:0000012!1.77e-09!682;CL:0000680!8.05e-09!57;CL:0000056!8.05e-09!57;CL:0000355!8.05e-09!57;CL:0000183!9.29e-09!59;CL:0000144!9.31e-09!625;CL:0000192!1.37e-08!42;CL:0000514!1.37e-08!42;CL:0000057!2.07e-08!75;CL:0000187!3.48e-08!54;CL:0000359!4.10e-08!32;CL:0002371!1.08e-07!591 | |ontology_enrichment_celltype=CL:0000055!4.59e-19!180;CL:0000220!2.91e-18!246;CL:0002321!9.92e-18!248;CL:0000222!7.20e-11!119;CL:0000066!8.03e-11!254;CL:0000548!2.61e-10!679;CL:0000004!2.61e-10!679;CL:0000255!2.61e-10!679;CL:0000012!1.77e-09!682;CL:0000680!8.05e-09!57;CL:0000056!8.05e-09!57;CL:0000355!8.05e-09!57;CL:0000183!9.29e-09!59;CL:0000144!9.31e-09!625;CL:0000192!1.37e-08!42;CL:0000514!1.37e-08!42;CL:0000057!2.07e-08!75;CL:0000187!3.48e-08!54;CL:0000359!4.10e-08!32;CL:0002371!1.08e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.89e-10;19!CL:0000359;4.90e-08;32!CL:0000134;9.75e-08;55!CL:0000048;4.21e-07;58!CL:0000192;7.68e-07;43!CL:0000723;7.80e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.13e-16,250;CL:0000222,1.74e-10,121;CL:0000349,1.99e-10,19;CL:0000680,3.24e-09,58;CL:0000056,3.24e-09,58;CL:0000355,3.24e-09,58;CL:0000192,4.66e-09,43;CL:0000514,4.66e-09,43;CL:0000066,5.81e-09,253;CL:0000187,1.53e-08,55;CL:0000359,2.15e-08,32;CL:0000057,7.01e-08,76;CL:0000393,5.90e-07,61;CL:0000211,5.90e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;7.68e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.21e-07!14 | |ontology_enrichment_disease=DOID:2394!5.21e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.04e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.31e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0005256!5.01e-12!143;UBERON:0002100!8.37e-11!216;UBERON:0000475!2.74e-10!365;UBERON:0000468!3.43e-10!659;UBERON:0000486!1.14e-09!82;UBERON:0003104!1.35e-09!238;UBERON:0009142!1.35e-09!238;UBERON:0003914!1.96e-09!118;UBERON:0005631!2.98e-09!14;UBERON:0000158!2.98e-09!14;UBERON:0004872!3.92e-09!84;UBERON:0002049!9.50e-09!79;UBERON:0007798!9.50e-09!79;UBERON:0000467!1.31e-08!625;UBERON:0000490!1.36e-08!138;UBERON:0000481!1.91e-08!347;UBERON:0000480!2.30e-08!626;UBERON:0000914!3.76e-08!83;UBERON:0002329!3.76e-08!83;UBERON:0003077!3.76e-08!83;UBERON:0003059!3.76e-08!83;UBERON:0007282!3.76e-08!83;UBERON:0009618!3.76e-08!83;UBERON:0007285!3.76e-08!83;UBERON:0001134!5.09e-08!61;UBERON:0002036!5.09e-08!61;UBERON:0003082!5.09e-08!61;UBERON:0002385!5.54e-08!63;UBERON:0001015!5.54e-08!63;UBERON:0000383!5.54e-08!63;UBERON:0000478!7.15e-08!24;UBERON:0001637!1.26e-07!42;UBERON:0003509!1.26e-07!42;UBERON:0004572!1.26e-07!42;UBERON:0000119!4.17e-07!312;UBERON:0000483!4.43e-07!309;UBERON:0004290!6.26e-07!70;UBERON:0004923!9.08e-07!57 | |ontology_enrichment_uberon=UBERON:0005256!5.01e-12!143;UBERON:0002100!8.37e-11!216;UBERON:0000475!2.74e-10!365;UBERON:0000468!3.43e-10!659;UBERON:0000486!1.14e-09!82;UBERON:0003104!1.35e-09!238;UBERON:0009142!1.35e-09!238;UBERON:0003914!1.96e-09!118;UBERON:0005631!2.98e-09!14;UBERON:0000158!2.98e-09!14;UBERON:0004872!3.92e-09!84;UBERON:0002049!9.50e-09!79;UBERON:0007798!9.50e-09!79;UBERON:0000467!1.31e-08!625;UBERON:0000490!1.36e-08!138;UBERON:0000481!1.91e-08!347;UBERON:0000480!2.30e-08!626;UBERON:0000914!3.76e-08!83;UBERON:0002329!3.76e-08!83;UBERON:0003077!3.76e-08!83;UBERON:0003059!3.76e-08!83;UBERON:0007282!3.76e-08!83;UBERON:0009618!3.76e-08!83;UBERON:0007285!3.76e-08!83;UBERON:0001134!5.09e-08!61;UBERON:0002036!5.09e-08!61;UBERON:0003082!5.09e-08!61;UBERON:0002385!5.54e-08!63;UBERON:0001015!5.54e-08!63;UBERON:0000383!5.54e-08!63;UBERON:0000478!7.15e-08!24;UBERON:0001637!1.26e-07!42;UBERON:0003509!1.26e-07!42;UBERON:0004572!1.26e-07!42;UBERON:0000119!4.17e-07!312;UBERON:0000483!4.43e-07!309;UBERON:0004290!6.26e-07!70;UBERON:0004923!9.08e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.40e-08;24!UBERON:0005631;5.45e-07;10!UBERON:0000158;5.45e-07;10 | |||
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| ||
|short_description=p2@BMP1 | |short_description=p2@BMP1 | ||
}} | }} |
Latest revision as of 10:34, 17 September 2015
Short description: | p2@BMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397816, ENST00000520970_5end |
EntrezGene: | BMP1 |
HGNC: | 1067 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.13e-16 | 250 |
mesodermal cell | 1.74e-10 | 121 |
extraembryonic cell | 1.99e-10 | 19 |
muscle precursor cell | 3.24e-09 | 58 |
myoblast | 3.24e-09 | 58 |
multi-potent skeletal muscle stem cell | 3.24e-09 | 58 |
smooth muscle cell | 4.66e-09 | 43 |
smooth muscle myoblast | 4.66e-09 | 43 |
epithelial cell | 5.81e-09 | 253 |
muscle cell | 1.53e-08 | 55 |
vascular associated smooth muscle cell | 2.15e-08 | 32 |
fibroblast | 7.01e-08 | 76 |
electrically responsive cell | 5.90e-07 | 61 |
electrically active cell | 5.90e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.41e-10 | 160 |
entire embryonic mesenchyme | 9.41e-10 | 160 |
extraembryonic membrane | 9.48e-10 | 14 |
membranous layer | 9.48e-10 | 14 |
multilaminar epithelium | 2.23e-09 | 83 |
trunk mesenchyme | 1.11e-08 | 122 |
epithelial tube | 1.94e-08 | 117 |
skeletal muscle tissue | 2.18e-08 | 62 |
striated muscle tissue | 2.18e-08 | 62 |
myotome | 2.18e-08 | 62 |
splanchnic layer of lateral plate mesoderm | 2.30e-08 | 83 |
muscle tissue | 2.37e-08 | 64 |
musculature | 2.37e-08 | 64 |
musculature of body | 2.37e-08 | 64 |
extraembryonic structure | 4.77e-08 | 24 |
trunk | 4.84e-08 | 199 |
epithelial vesicle | 6.92e-08 | 78 |
vasculature | 8.87e-08 | 78 |
vascular system | 8.87e-08 | 78 |
artery | 2.20e-07 | 42 |
arterial blood vessel | 2.20e-07 | 42 |
arterial system | 2.20e-07 | 42 |
organ component layer | 9.30e-07 | 66 |
somite | 9.85e-07 | 71 |
presomitic mesoderm | 9.85e-07 | 71 |
presumptive segmental plate | 9.85e-07 | 71 |
dermomyotome | 9.85e-07 | 71 |
trunk paraxial mesoderm | 9.85e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.31e-07 | 14 |