FFCP PHASE1:Hg19::chr2:149895239..149895245,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=130576 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=27018 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8NI32 | ||
|association_with_transcript=7bp_to_ENST00000409876_5end | |association_with_transcript=7bp_to_ENST00000409876_5end | ||
|cluster_id=chr2:149895239..149895245,+ | |cluster_id=chr2:149895239..149895245,+ | ||
Latest revision as of 10:39, 17 September 2015
| Short description: | p8@LYPD6B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_LYPD6B_5end |
| Coexpression cluster: | C2661_amniotic_endometrioid_squamous_Olfactory_rectal_stomach_bronchogenic |
| Association with transcript: | 7bp_to_ENST00000409876_5end |
| EntrezGene: | LYPD6B |
| HGNC: | 27018 |
| UniProt: | Q8NI32 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p8@LYPD6B |
|---|
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| amnion mesenchymal stem cell | 2.18e-12 | 5 |
| peptide hormone secreting cell | 1.48e-07 | 1 |
| enteroendocrine cell | 1.48e-07 | 1 |
| type D enteroendocrine cell | 1.48e-07 | 1 |
| somatostatin secreting cell | 1.48e-07 | 1 |
| pancreatic D cell | 1.48e-07 | 1 |
| progenitor cell of endocrine pancreas | 1.48e-07 | 1 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| male genital duct | 9.14e-10 | 3 |
| internal male genitalia | 9.14e-10 | 3 |
| amnion | 5.56e-09 | 7 |
| vas deferens | 4.89e-08 | 1 |
| spermatic cord | 4.89e-08 | 1 |
| somatic layer of lateral plate mesoderm | 6.53e-08 | 8 |
| seminal vesicle | 7.26e-08 | 1 |
| seminal fluid secreting gland | 7.26e-08 | 1 |
| maxillary sinus | 7.76e-08 | 1 |
| paranasal sinus | 7.76e-08 | 1 |
Showing 1 to 10 of 23 entries
| Ontology term | p-value | n |
|---|---|---|
| paranasal sinus cancer | 7.76e-08 | 1 |
| maxillary sinus cancer | 7.76e-08 | 1 |
| skin squamous cell carcinoma | 8.28e-08 | 1 |
| keratoacanthoma | 8.28e-08 | 1 |
| somatostatinoma | 1.48e-07 | 1 |
| squamous cell carcinoma | 2.66e-07 | 14 |
Showing 1 to 6 of 6 entries
