FFCP PHASE1:Hg19::chr15:39880370..39880395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7057 | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11785 | |HGNC=11785 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-405bp_to_uc010bbi.2_5end | |association_with_transcript=-405bp_to_uc010bbi.2_5end | ||
|cluster_id=chr15:39880370..39880395,+ | |||
|coexpression_cluster_id=C142 | |||
|description=CAGE_peak_25_at_THBS1_5end | |description=CAGE_peak_25_at_THBS1_5end | ||
|id=chr15:39880370..39880395,+ | |id=chr15:39880370..39880395,+ | ||
|ontology_enrichment_celltype=CL:0002371!4.19e-18!591;CL:0000057!4.20e-16!75;CL:0000055!1.78e-15!180;CL:0000144!2.91e-15!625;CL:0000548!1.69e-12!679;CL:0000004!1.69e-12!679;CL:0000255!1.69e-12!679;CL:0000012!5.37e-12!682;CL:0000222!5.78e-12!119;CL:0000220!5.66e-11!246;CL:0002321!1.42e-10!248;CL:0002139!8.91e-10!24;CL:0000115!7.23e-09!35;CL:0002334!1.45e-08!12;CL:0002078!6.14e-08!44;CL:0000071!1.15e-07!18;CL:0002546!1.15e-07!18;CL:0000003!5.66e-07!722 | |ontology_enrichment_celltype=CL:0002371!4.19e-18!591;CL:0000057!4.20e-16!75;CL:0000055!1.78e-15!180;CL:0000144!2.91e-15!625;CL:0000548!1.69e-12!679;CL:0000004!1.69e-12!679;CL:0000255!1.69e-12!679;CL:0000012!5.37e-12!682;CL:0000222!5.78e-12!119;CL:0000220!5.66e-11!246;CL:0002321!1.42e-10!248;CL:0002139!8.91e-10!24;CL:0000115!7.23e-09!35;CL:0002334!1.45e-08!12;CL:0002078!6.14e-08!44;CL:0000071!1.15e-07!18;CL:0002546!1.15e-07!18;CL:0000003!5.66e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.48e-14;24!CL:0000115;4.44e-12;36!CL:0002334;8.14e-12;12!CL:0000071;6.55e-10;18!CL:0002620;6.74e-09;23!CL:1000413;7.05e-08;9!CL:0000349;1.92e-07;19!CL:0002078;4.90e-07;45 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.00e-17,76;CL:0002139,7.99e-14,24;CL:0000115,2.25e-13,36;CL:0002334,1.09e-11,12;CL:0002078,3.56e-10,45;CL:0000071,5.75e-10,18;CL:0002546,5.75e-10,18;CL:0002620,5.55e-09,23;CL:0000222,1.10e-08,121;CL:0000213,1.90e-08,58;CL:0000215,1.90e-08,58;CL:1000413,9.24e-08,9;CL:0000349,2.63e-07,19;CL:0000723,3.62e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002546;6.55e-10;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;6.33e-07;5!DOID:450;6.33e-07;5!DOID:66;6.33e-07;5!DOID:423;6.33e-07;5!DOID:0080000;6.33e-07;5!DOID:11722;6.33e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.06e-07,5;DOID:450,6.06e-07,5;DOID:66,6.06e-07,5;DOID:423,6.06e-07,5;DOID:0080000,6.06e-07,5;DOID:11722,6.06e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.53e-15!84;UBERON:0000055!1.20e-13!69;UBERON:0002049!1.52e-12!79;UBERON:0007798!1.52e-12!79;UBERON:0004535!1.18e-11!110;UBERON:0001009!1.25e-11!113;UBERON:0001981!1.38e-11!60;UBERON:0007500!1.38e-11!60;UBERON:0004537!1.38e-11!60;UBERON:0006965!1.38e-11!60;UBERON:0003102!9.00e-11!95;UBERON:0000468!1.26e-10!659;UBERON:0001637!5.14e-10!42;UBERON:0003509!5.14e-10!42;UBERON:0004572!5.14e-10!42;UBERON:0003914!7.51e-10!118;UBERON:0000467!4.43e-09!625;UBERON:0000480!6.13e-09!626;UBERON:0000926!1.21e-08!448;UBERON:0004120!1.21e-08!448;UBERON:0006603!1.21e-08!448;UBERON:0000490!3.19e-08!138;UBERON:0001986!1.15e-07!18;UBERON:0004638!1.15e-07!18;UBERON:0004852!1.15e-07!18;UBERON:0002199!1.85e-07!45;UBERON:0002416!1.85e-07!45;UBERON:0003081!2.83e-07!216;UBERON:0000914!3.65e-07!83;UBERON:0002329!3.65e-07!83;UBERON:0003077!3.65e-07!83;UBERON:0003059!3.65e-07!83;UBERON:0007282!3.65e-07!83;UBERON:0009618!3.65e-07!83;UBERON:0007285!3.65e-07!83;UBERON:0000486!3.95e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;6.55e-10;18!UBERON:0001986;6.55e-10;18!UBERON:0004852;6.55e-10;18!UBERON:0001637;1.01e-09;42!UBERON:0003509;1.01e-09;42!UBERON:0004572;1.01e-09;42!UBERON:0002097;1.37e-08;41!UBERON:0000487;1.48e-08;22!UBERON:0002199;1.63e-08;46!UBERON:0002416;1.63e-08;46!UBERON:0006914;4.36e-08;25!UBERON:0003915;7.05e-08;9!UBERON:0004700;7.05e-08;9!UBERON:0001917;7.05e-08;9!UBERON:0007500;9.37e-08;56!UBERON:0001981;9.37e-08;56!UBERON:0004537;9.37e-08;56!UBERON:0003688;9.88e-08;6!UBERON:0002358;9.88e-08;6!UBERON:0003684;9.88e-08;6!UBERON:0001178;9.88e-08;6!UBERON:0004573;1.95e-07;33!UBERON:0004571;1.95e-07;33!UBERON:0000055;2.28e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,8.05e-14,68;UBERON:0004872,5.02e-13,83;UBERON:0002199,1.89e-12,46;UBERON:0002416,1.89e-12,46;UBERON:0007500,9.18e-12,59;UBERON:0001981,9.18e-12,59;UBERON:0004537,9.18e-12,59;UBERON:0006965,9.18e-12,59;UBERON:0001637,3.83e-11,42;UBERON:0003509,3.83e-11,42;UBERON:0004572,3.83e-11,42;UBERON:0002097,3.94e-11,41;UBERON:0002049,1.14e-10,78;UBERON:0007798,1.14e-10,78;UBERON:0004638,5.75e-10,18;UBERON:0001986,5.75e-10,18;UBERON:0004852,5.75e-10,18;UBERON:0004535,1.03e-08,109;UBERON:0000487,1.22e-08,22;UBERON:0001009,3.49e-08,112;UBERON:0006914,3.58e-08,25;UBERON:0003914,6.83e-08,117;UBERON:0003915,9.24e-08,9;UBERON:0004700,9.24e-08,9;UBERON:0001917,9.24e-08,9;UBERON:0003081,1.23e-07,203;UBERON:0003102,1.39e-07,99;UBERON:0004573,1.40e-07,33;UBERON:0004571,1.40e-07,33;UBERON:0003688,1.54e-07,6;UBERON:0002358,1.54e-07,6;UBERON:0003684,1.54e-07,6;UBERON:0001178,1.54e-07,6;UBERON:0004871,8.73e-07,8 | |||
|phase1_expression=3.81524596468169,13.274232481241,1.26858963686374,10.007329835313,4.46961094427288,9.59572376510406,2.53299878168311,0.631719873426831,0.522371256399677,0.245733936501509,0.697801167972428,2.18441372130172,3.16520373874144,0.123766352960047,1.65698687863958,0.672325146451775,1.80808358407193,5.84248072309899,2.92759679274304,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.464448369948228,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0,2.4065333696417,0,0.223915474239924,0,0,0.436194716338694,0,0.242584061187816,1.62700325833979,0,0,2.8769239232215,0.256160706529101,0.47296445977717,1.03423704220986,0.645484683583826,0,1.88242339542605,0.545812300115692,0,3.97909060082173,0.641858054152187,0.639337125799041,0.989553900560148,0,0,4.64334781805734,0,0.622822248995575,3.76872997885115,0,0,2.42159801053347,0,0,0,0,0,0,0.450530678524519,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,1.53435074212236,1.0843174571537,0.50133791063589,1.88300474649071,0,1.94653948121054,0,0.443458794925128,0.175669571386252,0.130979075497713,0.728590576585084,0.370784442784429,0,0,0,0,0,0,1.59009925893364,0.860234595106124,1.38856200643038,1.13061588384802,2.09749718104953,8.52865930014209,2.92592953151535,1.29208379584664,0,4.01664735317604,2.01414658554573,0.760272105718513,3.66093086322254,4.04429388380456,17.8231228533987,2.41109266367015,1.57170560838319,1.80178368773316,0,0,1.64881569537367,0,0,0.872188104285069,6.95760732373446,2.78587125662075,2.1185468930115,2.29469296599051,0,1.68203280042692,2.1349799145941,11.1000396787722,0.622422070799533,0.808264032418128,1.47115712802113,0.151357427644931,0,0,0.312160076830321,0,0.298897361103602,0,0,0,0.61246251376468,0.737005903870608,0.413303124703062,1.18800285728205,8.15980866619238,0.910161361938026,0.718618141816238,0.168336113954066,0.500474079487857,0.831192346452549,0.438977620880838,9.50112166976961,3.30523729594513,0.680593098960126,7.89314397030993,3.41691822109708,4.66250182551036,2.70081986475962,2.16410311400722,3.86460810068444,1.67505170698431,2.86919764810153,3.02054715999716,3.78650661366172,2.20919756741518,1.61646056818812,5.32514388774922,1.41052937518696,3.05209066158878,0.386521706326594,1.90922284413584,0.573609190778008,0,0,0,0.10366105501537,0.252320850875628,0.36497735907583,3.12899064659632,19.9404690839794,0,8.8229906326076,1.44375896333917,0.118306800039844,0.337169380156203,0.723033089650446,0,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,3.69077727312324,0,0,0,0,0,0,0,0,0.343135620597051,1.09750285408626,0,1.40740561376283,1.38882667737794,0,0,1.44331342025273,0,0,3.46479474626577,4.1668696131895,5.70762456703795,0,0,0,0,0,0,3.52762469217605,0.850650583454319,1.07470227243418,0.871901815541886,2.68367875415648,0.492663237895943,0,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0,0,0,0,0,0.387815147273333,0,0,1.86156681609409,2.08014873822732,0,1.41849132023278,0,0.57191197463259,0,1.64648067356154,0,0,0,0,0,0,0,0,0,2.15662369942424,1.14861935834114,0,0.289562613335158,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,11.2304265226636,22.4820525884424,11.1968714674094,10.0741616893733,0.902838299183157,0,1.03473071292505,0,0.737476674166813,1.73767228936166,0,0.686286847621712,0,0.215714200818617,0.320182673410333,1.5156378572313,0,3.62868351995616,3.96972492510043,9.51464234385987,15.9976253826852,1.15325234330131,6.14048698880044,4.66476371316462,5.93672265779964,3.54682295746108,2.30830242907065,0.574890092096664,3.11552657510173,1.39452454151951,0.120859449591622,3.40860999515584,0.368323955743585,0.574072240823034,0.364182336013434,1.04899531967539,0,0,0,0,0.316654886678627,2.27466768141793,2.2112181685947,1.72732732881711,7.71136263451447,0,0,0.254876273045038,0.831076008928724,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,1.72279661398852,3.25030123018261,1.6068392984416,0.096670718292122,0,0.15350367472613,0.275673144969061,0,0.435050081742686,0.170453254832202,0.0890320356467374,0.495854746082934,1.34533047155574,1.14851441245126,0.10115778085555,0,1.88887408098384,0,0,0.532306030317022,0.869932992075073,1.8532421910392,0.429374660225974,0.372158369359667,0,0.953150969619124,0.255897791311334,0,0,0,0.719489830333259,0.54907405947211,0.353437207037059,0,0,3.37006764991185,0,1.70599442741899,4.22600587027022,0.272999822815972,1.41405431953713,1.13008116620243,0,5.97095077717098,3.94605796728386,1.15755106853338,1.9676842561399,1.62328301570163,2.16876448669825,0.563391205064483,0.573645408816206,0.491245205065606,1.07001315444375,0,1.47775344708365,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,1.29151611801369,1.68471475667626,3.99087138183008,3.21612760289743,0,0,0,0,0,0,0,0.79312517629427,0,1.9249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| ||
|short_description=p25@THBS1 | |short_description=p25@THBS1 | ||
}} | }} |
Latest revision as of 10:46, 17 September 2015
Short description: | p25@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | -405bp_to_uc010bbi.2_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.00e-17 | 76 |
endothelial cell of vascular tree | 7.99e-14 | 24 |
endothelial cell | 2.25e-13 | 36 |
preadipocyte | 1.09e-11 | 12 |
meso-epithelial cell | 3.56e-10 | 45 |
blood vessel endothelial cell | 5.75e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.75e-10 | 18 |
skin fibroblast | 5.55e-09 | 23 |
mesodermal cell | 1.10e-08 | 121 |
lining cell | 1.90e-08 | 58 |
barrier cell | 1.90e-08 | 58 |
endothelial cell of artery | 9.24e-08 | 9 |
extraembryonic cell | 2.63e-07 | 19 |
somatic stem cell | 3.62e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.06e-07 | 5 |
myotonic disease | 6.06e-07 | 5 |
muscle tissue disease | 6.06e-07 | 5 |
myopathy | 6.06e-07 | 5 |
muscular disease | 6.06e-07 | 5 |
myotonic dystrophy | 6.06e-07 | 5 |