FFCP PHASE1:Hg19::chr2:150444300..150444311,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27249 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25221 | |||
|TSSclassifier=strong | |||
|UniProt=F8WEC0 | |||
|association_with_transcript=-8bp_to_ENST00000422782_5end | |||
|cluster_id=chr2:150444300..150444311,- | |||
|description=CAGE_peak_2_at_MMADHC_5end | |||
|id=chr2:150444300..150444311,- | |||
|ontology_enrichment_celltype=CL:0000055!1.42e-12!180;CL:0000548!1.38e-10!679;CL:0000004!1.38e-10!679;CL:0000255!1.38e-10!679;CL:0000012!2.89e-10!682;CL:0000723!1.03e-09!436;CL:0000048!1.33e-09!430;CL:0002371!1.62e-09!591;CL:0000144!4.30e-09!625;CL:0000034!5.99e-09!444;CL:0000057!1.80e-08!75;CL:0000393!2.49e-07!60;CL:0000211!2.49e-07!60;CL:0000680!2.99e-07!57;CL:0000056!2.99e-07!57;CL:0000355!2.99e-07!57 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,5.10e-10,433;CL:0000048,5.11e-10,427;CL:0000057,3.01e-09,76;CL:0000034,3.14e-09,441;CL:0000393,5.67e-07,61;CL:0000211,5.67e-07,61;CL:0000680,7.00e-07,58;CL:0000056,7.00e-07,58;CL:0000355,7.00e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.60e-10!83;UBERON:0002329!5.60e-10!83;UBERON:0003077!5.60e-10!83;UBERON:0003059!5.60e-10!83;UBERON:0007282!5.60e-10!83;UBERON:0009618!5.60e-10!83;UBERON:0007285!5.60e-10!83;UBERON:0000486!3.94e-09!82;UBERON:0004290!4.81e-09!70;UBERON:0003102!3.10e-07!95;UBERON:0001134!6.50e-07!61;UBERON:0002036!6.50e-07!61;UBERON:0003082!6.50e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,1.12e-08,83;UBERON:0002329,1.13e-08,71;UBERON:0003059,1.13e-08,71;UBERON:0007282,1.13e-08,71;UBERON:0004290,1.13e-08,71;UBERON:0009618,1.13e-08,71;UBERON:0007524,3.03e-08,73;UBERON:0003077,3.25e-08,72;UBERON:0007285,3.25e-08,72;UBERON:0003102,5.95e-08,99 | |||
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| |||
|short_description=p2@MMADHC | |||
}} |
Latest revision as of 10:53, 17 September 2015
Short description: | p2@MMADHC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MMADHC_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000422782_5end |
EntrezGene: | MMADHC |
HGNC: | 25221 |
UniProt: | F8WEC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 5.10e-10 | 433 |
multi fate stem cell | 5.11e-10 | 427 |
fibroblast | 3.01e-09 | 76 |
stem cell | 3.14e-09 | 441 |
electrically responsive cell | 5.67e-07 | 61 |
electrically active cell | 5.67e-07 | 61 |
muscle precursor cell | 7.00e-07 | 58 |
myoblast | 7.00e-07 | 58 |
multi-potent skeletal muscle stem cell | 7.00e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 1.12e-08 | 83 |
somite | 1.13e-08 | 71 |
presomitic mesoderm | 1.13e-08 | 71 |
presumptive segmental plate | 1.13e-08 | 71 |
dermomyotome | 1.13e-08 | 71 |
trunk paraxial mesoderm | 1.13e-08 | 71 |
dense mesenchyme tissue | 3.03e-08 | 73 |
paraxial mesoderm | 3.25e-08 | 72 |
presumptive paraxial mesoderm | 3.25e-08 | 72 |
surface structure | 5.95e-08 | 99 |