FFCP PHASE1:Hg19::chr6:2765595..2765797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56897 | |EntrezGene=56897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20876 | |HGNC=20876 | ||
|TSSclassifier=strong | |||
|UniProt=Q96S55 | |UniProt=Q96S55 | ||
|association_with_transcript=0bp_to_ENST00000380771,ENST00000380773,NM_020135,NM_130395,uc003mtz.2,uc003mua.2_5end | |association_with_transcript=0bp_to_ENST00000380771,ENST00000380773,NM_020135,NM_130395,uc003mtz.2,uc003mua.2_5end | ||
|cluster_id=chr6:2765595..2765797,+ | |||
|description=CAGE_peak_1_at_WRNIP1_5end | |description=CAGE_peak_1_at_WRNIP1_5end | ||
|id=chr6:2765595..2765797,+ | |id=chr6:2765595..2765797,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.15e-12!254 | |ontology_enrichment_celltype=CL:0000066!3.15e-12!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.33e-12,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.29e-14!235;DOID:14566!9.31e-14!239;DOID:0050687!2.06e-08!143;DOID:305!3.90e-07!106 | |ontology_enrichment_disease=DOID:162!1.29e-14!235;DOID:14566!9.31e-14!239;DOID:0050687!2.06e-08!143;DOID:305!3.90e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.29e-14,235;DOID:14566,9.31e-14,239;DOID:0050687,2.06e-08,143;DOID:305,3.90e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000064!7.14e-11!219;UBERON:0000153!1.93e-10!129;UBERON:0007811!1.93e-10!129;UBERON:0000033!8.31e-10!123;UBERON:0002346!2.26e-09!90;UBERON:0000477!2.40e-09!286;UBERON:0000924!5.27e-09!173;UBERON:0006601!5.27e-09!173;UBERON:0003075!9.08e-09!86;UBERON:0007284!9.08e-09!86;UBERON:0004121!1.84e-08!169;UBERON:0000955!2.10e-08!69;UBERON:0006238!2.10e-08!69;UBERON:0000073!6.85e-08!94;UBERON:0001016!6.85e-08!94;UBERON:0003056!7.16e-08!61;UBERON:0000025!1.11e-07!194;UBERON:0001049!1.19e-07!57;UBERON:0005068!1.19e-07!57;UBERON:0006241!1.19e-07!57;UBERON:0007135!1.19e-07!57;UBERON:0004111!1.27e-07!241;UBERON:0000119!1.48e-07!312;UBERON:0005743!1.78e-07!86;UBERON:0000483!2.51e-07!309;UBERON:0001017!3.54e-07!82;UBERON:0002616!7.67e-07!59 | |ontology_enrichment_uberon=UBERON:0000064!7.14e-11!219;UBERON:0000153!1.93e-10!129;UBERON:0007811!1.93e-10!129;UBERON:0000033!8.31e-10!123;UBERON:0002346!2.26e-09!90;UBERON:0000477!2.40e-09!286;UBERON:0000924!5.27e-09!173;UBERON:0006601!5.27e-09!173;UBERON:0003075!9.08e-09!86;UBERON:0007284!9.08e-09!86;UBERON:0004121!1.84e-08!169;UBERON:0000955!2.10e-08!69;UBERON:0006238!2.10e-08!69;UBERON:0000073!6.85e-08!94;UBERON:0001016!6.85e-08!94;UBERON:0003056!7.16e-08!61;UBERON:0000025!1.11e-07!194;UBERON:0001049!1.19e-07!57;UBERON:0005068!1.19e-07!57;UBERON:0006241!1.19e-07!57;UBERON:0007135!1.19e-07!57;UBERON:0004111!1.27e-07!241;UBERON:0000119!1.48e-07!312;UBERON:0005743!1.78e-07!86;UBERON:0000483!2.51e-07!309;UBERON:0001017!3.54e-07!82;UBERON:0002616!7.67e-07!59 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.51e-09,86;UBERON:0011216,1.76e-09,223;UBERON:0004121,6.00e-09,171;UBERON:0000924,6.00e-09,171;UBERON:0006601,6.00e-09,171;UBERON:0003075,6.13e-09,82;UBERON:0007284,6.13e-09,82;UBERON:0000955,2.23e-08,68;UBERON:0006238,2.23e-08,68;UBERON:0000073,3.74e-08,53;UBERON:0002616,3.74e-08,53;UBERON:0000025,9.57e-08,192;UBERON:0003056,1.24e-07,61;UBERON:0001049,1.25e-07,56;UBERON:0005068,1.25e-07,56;UBERON:0006241,1.25e-07,56;UBERON:0007135,1.25e-07,56;UBERON:0004111,1.41e-07,240;UBERON:0001016,1.50e-07,89;UBERON:0000119,2.06e-07,309;UBERON:0010371,2.60e-07,104;UBERON:0000483,3.47e-07,306;UBERON:0001017,3.85e-07,81 | |||
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|short_description=p1@WRNIP1 | |short_description=p1@WRNIP1 | ||
}} | }} |
Latest revision as of 11:00, 17 September 2015
Short description: | p1@WRNIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WRNIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380771, ENST00000380773, NM_020135, NM_130395, uc003mtz.2, uc003mua.2_5end |
EntrezGene: | WRNIP1 |
HGNC: | 20876 |
UniProt: | Q96S55 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.33e-12 | 253 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.51e-09 | 86 |
organ system subdivision | 1.76e-09 | 223 |
ectoderm-derived structure | 6.00e-09 | 171 |
ectoderm | 6.00e-09 | 171 |
presumptive ectoderm | 6.00e-09 | 171 |
neural plate | 6.13e-09 | 82 |
presumptive neural plate | 6.13e-09 | 82 |
brain | 2.23e-08 | 68 |
future brain | 2.23e-08 | 68 |
regional part of nervous system | 3.74e-08 | 53 |
regional part of brain | 3.74e-08 | 53 |
tube | 9.57e-08 | 192 |
pre-chordal neural plate | 1.24e-07 | 61 |
neural tube | 1.25e-07 | 56 |
neural rod | 1.25e-07 | 56 |
future spinal cord | 1.25e-07 | 56 |
neural keel | 1.25e-07 | 56 |
anatomical conduit | 1.41e-07 | 240 |
nervous system | 1.50e-07 | 89 |
cell layer | 2.06e-07 | 309 |
ecto-epithelium | 2.60e-07 | 104 |
epithelium | 3.47e-07 | 306 |
central nervous system | 3.85e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.29e-14 | 235 |
disease of cellular proliferation | 9.31e-14 | 239 |
cell type cancer | 2.06e-08 | 143 |
carcinoma | 3.90e-07 | 106 |