FFCP PHASE1:Hg19::chr8:22250363..22250385,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23516 | |EntrezGene=23516 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20858 | |HGNC=20858 | ||
|TSSclassifier=strong | |||
|UniProt=E5RFF5 | |UniProt=E5RFF5 | ||
|association_with_transcript=20bp_to_ENST00000520832_5end | |association_with_transcript=20bp_to_ENST00000520832_5end | ||
|cluster_id=chr8:22250363..22250385,+ | |||
|coexpression_cluster_id=C4742 | |||
|description=CAGE_peak_5_at_SLC39A14_5end | |description=CAGE_peak_5_at_SLC39A14_5end | ||
|id=chr8:22250363..22250385,+ | |id=chr8:22250363..22250385,+ | ||
|ontology_enrichment_celltype=CL:0000359!8.89e-12!32;CL:0000187!9.30e-11!54;CL:0000680!3.27e-10!57;CL:0000056!3.27e-10!57;CL:0000355!3.27e-10!57;CL:0000192!3.91e-09!42;CL:0000514!3.91e-09!42;CL:0000183!6.46e-09!59;CL:0000393!1.36e-08!60;CL:0000211!1.36e-08!60 | |ontology_enrichment_celltype=CL:0000359!8.89e-12!32;CL:0000187!9.30e-11!54;CL:0000680!3.27e-10!57;CL:0000056!3.27e-10!57;CL:0000355!3.27e-10!57;CL:0000192!3.91e-09!42;CL:0000514!3.91e-09!42;CL:0000183!6.46e-09!59;CL:0000393!1.36e-08!60;CL:0000211!1.36e-08!60 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.73e-12;32!CL:0002595;1.10e-07;5!CL:0000192;3.87e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,5.37e-13,32;CL:0000192,9.48e-09,43;CL:0000514,9.48e-09,43;CL:0002595,1.23e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000514;3.87e-07;43 | |||
|ontology_enrichment_disease=DOID:2394!5.78e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;3.01e-19;14!DOID:120;9.49e-09;27!DOID:193;5.58e-08;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.86e-19,14;DOID:120,9.26e-09,27;DOID:193,5.46e-08,29 | |||
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|ontology_enrichment_uberon_v019=UBERON:0000992;1.52e-13;13!UBERON:0002118;6.47e-12;5!UBERON:0004573;9.02e-11;33!UBERON:0004571;9.02e-11;33!UBERON:0000991;1.19e-09;21!UBERON:0007100;1.49e-09;25!UBERON:0001637;4.77e-08;42!UBERON:0003509;4.77e-08;42!UBERON:0004572;4.77e-08;42!UBERON:0003834;1.10e-07;5!UBERON:0001533;1.10e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,1.57e-13,13;UBERON:0004573,1.13e-12,33;UBERON:0004571,1.13e-12,33;UBERON:0002118,4.26e-12,5;UBERON:0000055,1.74e-11,68;UBERON:0001009,2.22e-11,112;UBERON:0004872,2.92e-11,83;UBERON:0000025,1.34e-10,192;UBERON:0001637,1.67e-10,42;UBERON:0003509,1.67e-10,42;UBERON:0004572,1.67e-10,42;UBERON:0004111,2.19e-10,240;UBERON:0007100,3.72e-10,27;UBERON:0007500,8.92e-10,59;UBERON:0001981,8.92e-10,59;UBERON:0004537,8.92e-10,59;UBERON:0006965,8.92e-10,59;UBERON:0000991,1.27e-09,21;UBERON:0009196,1.27e-09,21;UBERON:0009117,1.27e-09,21;UBERON:0005564,1.27e-09,21;UBERON:0002049,2.67e-09,78;UBERON:0007798,2.67e-09,78;UBERON:0004176,4.34e-09,22;UBERON:0004535,6.58e-09,109;UBERON:0007023,1.61e-08,114;UBERON:0003914,8.83e-08,117;UBERON:0003834,1.23e-07,5;UBERON:0001533,1.23e-07,5 | |||
|phase1_expression=0,0,0.422863212287913,0,0.893922188854576,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,2.01697543935533,0,0.730310090387373,2.92759679274304,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0.50133791063589,0,0.795285947051099,0,0.189069634328136,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,2.81980521976403,0,1.95249646038536,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,2.78059279707759,0,0,0,1.06748995729705,0.98667019366864,0,0.538842688278752,0.163461903113459,0,0,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0.751190294532984,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.412210116953756,0,0,0,0,0,0.184099797284599,0.484938170456436,0,0.10075209822764,0,1.15956511897978,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,2.36315962672562,0,0,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0,4.33099343283221,3.70388410061289,4.37584550139576,0,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,7.83742380354924,1.74306691720059,1.49959486773086,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,0.207970861530807,0,0.157702415033935,0,0.300946099727719,0,0,0,0.553107505625109,0.347534457872331,0,0,0,0,0,0,0,0,0.248107807818777,0,0.280660094433074,0,0,0,0,0.308419387605311,0.532685175939381,0.246381468041427,0.519254429183621,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,3.21367859688319,0.773365746336976,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0.290033387828457,0.0852266274161009,0,0,0,0,0,0,0.94443704049192,0.6970372701606,5.23657086299351,1.59691809095107,0.869932992075073,1.11194531462352,1.71749864090389,0,0.316379424718726,0,0,0,3.81843897511124,3.92474320099615,0.179872457583315,0,0,1.01091240786658,0,2.52755073743389,0,2.19342140668156,1.05650146756755,0.272999822815972,0,1.13008116620243,1.65409603063837,0.66343897524122,2.63070531152258,0,0,0.608731130888112,0,0.281695602532241,0,0,0.35667105148125,0.354761064070598,1.26664581178598,3.29294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,4.39524537815682,0,0,0,0,0,0,0,0.562677665642051,0.445234820091624,0,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,0,0,0,0,1.7755813014648,0,1.11136990144637,0,0.278304294485554,0,0,0,1.44999915086959,0,0,0,0,0,0,2.65722415744152,1.5677537021303,0,0.110579259931225,0,0,0,0,0.153900517007594,0.91153644677601,0,0,0,1.5950057986596,0.183195186803725,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973033209536731,1.22206028986725,0,0,0,0.471807930864739,0,0,0,0,0,0,0,0,0.31593289814244,1.20258735531594,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0.596143835108969,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0.101998217636322,0.288950589901519,1.80126086612937,0.410716136675979,0,0,0,0.558564802544508,0.687481272035051,9.33234931949858,2.79550600698588,2.57535628881943,9.59637267000052,0.268733889946905,0.360299883542404,0,0,0,0,0,0,2.38568906942791,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.394028536495991,0.419636705079985,0,0,0,0,9.93137955548147,0,0,0,0,0,0,0,0,4.54311924402056,0,3.36135686540031,2.51241943311111,0,0,0.427149650270779,1.10043013569766,0,0.496166021811951,0,0,0,3.26410682021684,4.2617281983859,10.7220951867212,3.60659893780785,0,0.886068179966986,0.610131324509816,1.001527445652,2.29363678276028,1.10929051536852,0.310482014706917,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0.233713309847224,0,0.378806010550178,0,0.889811221596536,1.14420034198462,0.907385542579434,1.24349760466224,2.51353754982378,2.23015474029183,4.04822800947244,1.24210365501008,0.414706207840855,0.53168342911599,2.08698024724694,4.50772826991655,4.95046775819434,3.25496586563729,2.18218391043071,1.71856891267982,2.78420255927096,1.59238355479446,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0.109209638192014,0,0,0,0,0.318004350653419,0,0,0.352675943690684,0.3062454773532,0.192687675289379,0,1.27707087245721,0.205116364240755,0,0.553258019713743,0,0,0,0,0,0,0,0,0,2.1058891937792,0.20170506870352,0,0,0,0,0.270150338473579,0,1.65349437200947,0.19024743058172,0.546974809018219,0.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| ||
|short_description=p5@SLC39A14 | |short_description=p5@SLC39A14 | ||
}} | }} |
Latest revision as of 11:01, 17 September 2015
Short description: | p5@SLC39A14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC39A14_5end |
Coexpression cluster: | C4742_skeletal_Mesothelial_heart_mature_mesenchymal_caudate_left |
Association with transcript: | 20bp_to_ENST00000520832_5end |
EntrezGene: | SLC39A14 |
HGNC: | 20858 |
UniProt: | E5RFF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 5.37e-13 | 32 |
smooth muscle cell | 9.48e-09 | 43 |
smooth muscle myoblast | 9.48e-09 | 43 |
smooth muscle cell of the subclavian artery | 1.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
female gonad | 1.57e-13 | 13 |
systemic artery | 1.13e-12 | 33 |
systemic arterial system | 1.13e-12 | 33 |
right ovary | 4.26e-12 | 5 |
vessel | 1.74e-11 | 68 |
circulatory system | 2.22e-11 | 112 |
splanchnic layer of lateral plate mesoderm | 2.92e-11 | 83 |
tube | 1.34e-10 | 192 |
artery | 1.67e-10 | 42 |
arterial blood vessel | 1.67e-10 | 42 |
arterial system | 1.67e-10 | 42 |
anatomical conduit | 2.19e-10 | 240 |
primary circulatory organ | 3.72e-10 | 27 |
epithelial tube open at both ends | 8.92e-10 | 59 |
blood vessel | 8.92e-10 | 59 |
blood vasculature | 8.92e-10 | 59 |
vascular cord | 8.92e-10 | 59 |
gonad | 1.27e-09 | 21 |
indifferent external genitalia | 1.27e-09 | 21 |
indifferent gonad | 1.27e-09 | 21 |
gonad primordium | 1.27e-09 | 21 |
vasculature | 2.67e-09 | 78 |
vascular system | 2.67e-09 | 78 |
external genitalia | 4.34e-09 | 22 |
cardiovascular system | 6.58e-09 | 109 |
adult organism | 1.61e-08 | 114 |
epithelial tube | 8.83e-08 | 117 |
thoracic segment blood vessel | 1.23e-07 | 5 |
subclavian artery | 1.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.86e-19 | 14 |
female reproductive organ cancer | 9.26e-09 | 27 |
reproductive organ cancer | 5.46e-08 | 29 |