FFCP PHASE1:Hg19::chr12:133187131..133187169,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100507055 | |EntrezGene=100507055 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-94bp_to_ENST00000536100,NM_001195520_5end | |association_with_transcript=-94bp_to_ENST00000536100,NM_001195520_5end | ||
|cluster_id=chr12:133187131..133187169,- | |||
|coexpression_cluster_id=C39 | |coexpression_cluster_id=C39 | ||
|description=CAGE_peak_1_at_LOC100507055_5end | |description=CAGE_peak_1_at_LOC100507055_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002262;8.28e-14;2!CL:1000398;8.28e-14;2 | |ontology_enrichment_celltype_v019=CL:0002262;8.28e-14;2!CL:1000398;8.28e-14;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002262,7.30e-14,2;CL:1000398,7.30e-14,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2!UBERON:0005754;8.64e-26;1 | |ontology_enrichment_development_v019=UBERON:0007297;2.74e-50;2!UBERON:0005754;8.64e-26;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-23!115;UBERON:0006947!1.40e-09!3;UBERON:0004054!1.40e-09!3;UBERON:0005904!3.02e-07!4 | |ontology_enrichment_uberon=UBERON:0007023!1.17e-23!115;UBERON:0006947!1.40e-09!3;UBERON:0004054!1.40e-09!3;UBERON:0005904!3.02e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.47e-74;3!UBERON:0004054;1.47e-74;3!UBERON:0005904;3.45e-56;4!UBERON:0001301;2.16e-26;1!UBERON:0001000;3.58e-26;1!UBERON:0005352;3.58e-26;1!UBERON:0000998;8.64e-26;1!UBERON:0006868;8.64e-26;1!UBERON:0000058;4.94e-23;10!UBERON:0003135;5.15e-21;11!UBERON:0001281;8.28e-14;2!UBERON:0003497;8.28e-14;2!UBERON:0003909;8.28e-14;2!UBERON:0003835;8.28e-14;2!UBERON:0004175;2.30e-11;21!UBERON:0003101;7.04e-11;22!UBERON:0000079;7.04e-11;22!UBERON:0001280;1.19e-09;3!UBERON:0004647;1.19e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.47e-74;3!UBERON:0004054;1.47e-74;3!UBERON:0005904;3.45e-56;4!UBERON:0001301;2.16e-26;1!UBERON:0001000;3.58e-26;1!UBERON:0005352;3.58e-26;1!UBERON:0000998;8.64e-26;1!UBERON:0006868;8.64e-26;1!UBERON:0000058;4.94e-23;10!UBERON:0003135;5.15e-21;11!UBERON:0001281;8.28e-14;2!UBERON:0003497;8.28e-14;2!UBERON:0003909;8.28e-14;2!UBERON:0003835;8.28e-14;2!UBERON:0004175;2.30e-11;21!UBERON:0003101;7.04e-11;22!UBERON:0000079;7.04e-11;22!UBERON:0001280;1.19e-09;3!UBERON:0004647;1.19e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.29e-74,3;UBERON:0004054,1.29e-74,3;UBERON:0005904,3.14e-56,4;UBERON:0001301,2.16e-26,1;UBERON:0001000,3.58e-26,1;UBERON:0005352,3.58e-26,1;UBERON:0000998,7.62e-26,1;UBERON:0006868,7.62e-26,1;UBERON:0000058,2.09e-21,19;UBERON:0003135,4.98e-21,11;UBERON:0001281,7.30e-14,2;UBERON:0003497,7.30e-14,2;UBERON:0003909,7.30e-14,2;UBERON:0003835,7.30e-14,2;UBERON:0000080,4.67e-12,9;UBERON:0002120,4.67e-12,9;UBERON:0004875,4.67e-12,9;UBERON:0005721,4.67e-12,9;UBERON:0005754,4.67e-12,9;UBERON:0007297,4.67e-12,9;UBERON:0003101,6.93e-11,22;UBERON:0000079,6.93e-11,22;UBERON:0004876,4.83e-10,11;UBERON:0001280,1.10e-09,3;UBERON:0004647,1.10e-09,3;UBERON:0005171,1.10e-09,3;UBERON:0004175,1.17e-09,25;UBERON:0003887,2.77e-09,12 | |||
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| ||
|short_description=p1@LOC100507055 | |short_description=p1@LOC100507055 | ||
}} | }} |
Latest revision as of 11:08, 17 September 2015
Short description: | p1@LOC100507055 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC100507055_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | -94bp_to_ENST00000536100, NM_001195520_5end |
EntrezGene: | LOC100507055 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 7.30e-14 | 2 |
endothelial cell of hepatic sinusoid | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.29e-74 | 3 |
internal male genitalia | 1.29e-74 | 3 |
duct of male reproductive system | 3.14e-56 | 4 |
epididymis | 2.16e-26 | 1 |
vas deferens | 3.58e-26 | 1 |
spermatic cord | 3.58e-26 | 1 |
seminal vesicle | 7.62e-26 | 1 |
seminal fluid secreting gland | 7.62e-26 | 1 |
duct | 2.09e-21 | 19 |
male reproductive organ | 4.98e-21 | 11 |
hepatic sinusoid | 7.30e-14 | 2 |
abdomen blood vessel | 7.30e-14 | 2 |
sinusoid | 7.30e-14 | 2 |
abdominal segment blood vessel | 7.30e-14 | 2 |
mesonephros | 4.67e-12 | 9 |
pronephros | 4.67e-12 | 9 |
nephrogenic cord | 4.67e-12 | 9 |
pronephric mesoderm | 4.67e-12 | 9 |
rostral part of nephrogenic cord | 4.67e-12 | 9 |
presumptive pronephric mesoderm | 4.67e-12 | 9 |
male organism | 6.93e-11 | 22 |
male reproductive system | 6.93e-11 | 22 |
urogenital ridge | 4.83e-10 | 11 |
liver parenchyma | 1.10e-09 | 3 |
liver lobule | 1.10e-09 | 3 |
hepatic duct | 1.10e-09 | 3 |
internal genitalia | 1.17e-09 | 25 |
intraembryonic coelom | 2.77e-09 | 12 |