FFCP PHASE1:Hg19::chr8:22446763..22446862,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:22446763..22446862,+ to FFCP PHASE1:Hg19::chr8:22446763..22446862,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64236 | |EntrezGene=64236 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13992 | |HGNC=13992 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGS7 | |UniProt=E5RGS7 | ||
|association_with_transcript=0bp_to_ENST00000430850,ENST00000443561,ENST00000447849,ENST00000450780_5end | |||
|cluster_id=chr8:22446763..22446862,+ | |||
|coexpression_cluster_id=C589 | |||
|description=CAGE_peak_1_at_PDLIM2_5end | |||
|id=chr8:22446763..22446862,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.18e-49!180;CL:0000183!1.12e-23!59;CL:0000222!8.48e-23!119;CL:0000680!8.64e-23!57;CL:0000056!8.64e-23!57;CL:0000355!8.64e-23!57;CL:0000187!4.27e-22!54;CL:0000393!1.81e-20!60;CL:0000211!1.81e-20!60;CL:0000192!6.66e-20!42;CL:0000514!6.66e-20!42;CL:0000057!1.79e-19!75;CL:0000359!2.50e-16!32;CL:0000220!1.90e-13!246;CL:0002321!2.49e-13!248;CL:0002494!1.59e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.32e-15;32!CL:0000192;9.49e-15;43!CL:0000187;1.35e-12;55!CL:0000393;9.82e-11;61!CL:0000211;9.82e-11;61!CL:0000057;2.04e-08;73!CL:0000134;5.34e-08;55!CL:0002320;1.24e-07;188!CL:0002494;1.31e-07;16!CL:0000723;3.51e-07;61!CL:0000048;3.80e-07;58!CL:0000499;7.03e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.09e-23,121;CL:0000680,1.83e-23,58;CL:0000056,1.83e-23,58;CL:0000355,1.83e-23,58;CL:0000187,9.29e-23,55;CL:0000393,4.13e-21,61;CL:0000211,4.13e-21,61;CL:0000192,1.60e-20,43;CL:0000514,1.60e-20,43;CL:0000057,3.24e-20,76;CL:0000359,1.56e-16,32;CL:0002321,5.43e-13,250;CL:0002494,1.31e-07,16;CL:0000499,6.82e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;9.49e-15;43!CL:0000355;2.18e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!5.62e-27!83;UBERON:0002329!5.62e-27!83;UBERON:0003077!5.62e-27!83;UBERON:0003059!5.62e-27!83;UBERON:0007282!5.62e-27!83;UBERON:0009618!5.62e-27!83;UBERON:0007285!5.62e-27!83;UBERON:0004290!4.18e-26!70;UBERON:0005256!5.03e-24!143;UBERON:0001134!2.59e-23!61;UBERON:0002036!2.59e-23!61;UBERON:0003082!2.59e-23!61;UBERON:0000486!2.96e-23!82;UBERON:0002049!7.20e-23!79;UBERON:0007798!7.20e-23!79;UBERON:0002385!8.42e-23!63;UBERON:0001015!8.42e-23!63;UBERON:0000383!8.42e-23!63;UBERON:0004872!9.54e-22!84;UBERON:0000475!1.61e-21!365;UBERON:0003914!3.45e-20!118;UBERON:0000055!1.84e-19!69;UBERON:0002100!5.08e-19!216;UBERON:0001981!7.22e-19!60;UBERON:0007500!7.22e-19!60;UBERON:0004537!7.22e-19!60;UBERON:0006965!7.22e-19!60;UBERON:0000119!7.15e-18!312;UBERON:0000481!7.94e-18!347;UBERON:0000490!1.91e-17!138;UBERON:0000483!1.98e-17!309;UBERON:0001637!7.73e-17!42;UBERON:0003509!7.73e-17!42;UBERON:0004572!7.73e-17!42;UBERON:0004535!1.50e-16!110;UBERON:0001009!2.95e-16!113;UBERON:0000477!1.22e-15!286;UBERON:0000468!3.86e-15!659;UBERON:0003104!7.49e-15!238;UBERON:0009142!7.49e-15!238;UBERON:0004573!7.50e-14!33;UBERON:0004571!7.50e-14!33;UBERON:0004111!1.15e-11!241;UBERON:0000467!2.22e-11!625;UBERON:0000480!2.86e-11!626;UBERON:0000025!3.10e-11!194;UBERON:0000922!1.72e-08!612;UBERON:0002050!3.08e-08!605;UBERON:0005423!3.08e-08!605;UBERON:0000923!3.77e-08!604;UBERON:0005291!3.77e-08!604;UBERON:0006598!3.77e-08!604;UBERON:0002532!3.77e-08!604;UBERON:0000947!1.20e-07!21;UBERON:0010191!1.20e-07!21;UBERON:0000926!1.46e-07!448;UBERON:0004120!1.46e-07!448;UBERON:0006603!1.46e-07!448;UBERON:0001013!5.54e-07!14;UBERON:0000948!5.61e-07!24;UBERON:0005498!5.61e-07!24;UBERON:0004140!5.61e-07!24;UBERON:0009881!5.61e-07!24;UBERON:0004141!5.61e-07!24;UBERON:0003084!5.61e-07!24;UBERON:0007005!5.61e-07!24;UBERON:0004139!5.61e-07!24;UBERON:0004291!5.61e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.24e-12;33!UBERON:0004571;1.24e-12;33!UBERON:0001637;6.18e-12;42!UBERON:0003509;6.18e-12;42!UBERON:0004572;6.18e-12;42!UBERON:0007500;9.85e-11;56!UBERON:0001981;9.85e-11;56!UBERON:0004537;9.85e-11;56!UBERON:0002049;1.19e-09;75!UBERON:0007798;1.19e-09;75!UBERON:0000055;3.56e-09;65!UBERON:0002385;7.22e-09;31!UBERON:0001015;7.22e-09;31!UBERON:0000383;7.22e-09;31!UBERON:0003914;1.03e-08;74!UBERON:0000947;9.90e-08;21!UBERON:0010191;9.90e-08;21!UBERON:0002384;1.65e-07;198!UBERON:0001013;4.73e-07;14!UBERON:0002204;9.80e-07;70 | |||
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| ||
|short_description=p1@PDLIM2 | |||
}} | }} |
Latest revision as of 11:59, 17 September 2015
Short description: | p1@PDLIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PDLIM2_5end |
Coexpression cluster: | C589_Mesenchymal_Smooth_Fibroblast_Osteoblast_tenocyte_Preadipocyte_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000430850, ENST00000443561, ENST00000447849, ENST00000450780_5end |
EntrezGene: | PDLIM2 |
HGNC: | 13992 |
UniProt: | E5RGS7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.09e-23 | 121 |
muscle precursor cell | 1.83e-23 | 58 |
myoblast | 1.83e-23 | 58 |
multi-potent skeletal muscle stem cell | 1.83e-23 | 58 |
muscle cell | 9.29e-23 | 55 |
electrically responsive cell | 4.13e-21 | 61 |
electrically active cell | 4.13e-21 | 61 |
smooth muscle cell | 1.60e-20 | 43 |
smooth muscle myoblast | 1.60e-20 | 43 |
fibroblast | 3.24e-20 | 76 |
vascular associated smooth muscle cell | 1.56e-16 | 32 |
embryonic cell | 5.43e-13 | 250 |
cardiocyte | 1.31e-07 | 16 |
stromal cell | 6.82e-07 | 28 |