FFCP PHASE1:Hg19::chr2:47601125..47601140,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:47601125..47601140,+
|short_description=p8@EPCAM
|description=CAGE_peak_8_at_EPCAM_5end
|association_with_transcript=211bp_to_ENST00000490733_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4072 | |EntrezGene=4072 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11529 | |HGNC=11529 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=211bp_to_ENST00000490733_5end | |||
|cluster_id=chr2:47601125..47601140,+ | |||
|coexpression_cluster_id=C1908 | |||
|description=CAGE_peak_8_at_EPCAM_5end | |||
|id=chr2:47601125..47601140,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.45e-17!254;CL:0000039!8.77e-11!7;CL:0000586!8.77e-11!7;CL:0000223!1.62e-10!59;CL:0002322!5.85e-09!5;CL:0002076!6.24e-09!43;CL:0002251!3.40e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.23e-07;1!CL:0002553;4.33e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,1.27e-07,1;CL:0002553,3.21e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.70e-34!106;DOID:0050687!4.15e-25!143;DOID:162!2.88e-13!235;DOID:14566!1.27e-12!239;DOID:1749!3.29e-11!14;DOID:299!1.56e-10!25;DOID:3119!3.79e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:299;4.30e-08;25!DOID:2152;1.23e-07;1!DOID:120;1.62e-07;27!DOID:178;4.33e-07;1!DOID:326;4.33e-07;1!DOID:3978;4.33e-07;1!DOID:3394;4.33e-07;1!DOID:5844;4.33e-07;1!DOID:193;5.88e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.61e-09,106;DOID:299,3.93e-08,25;DOID:2152,1.27e-07,1;DOID:120,1.72e-07,27;DOID:0050687,2.42e-07,143;DOID:193,6.19e-07,29;DOID:178,6.20e-07,1;DOID:326,6.20e-07,1;DOID:3978,6.20e-07,1;DOID:3394,6.20e-07,1;DOID:5844,6.20e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.93e-16!155;UBERON:0001555!1.93e-16!155;UBERON:0007026!1.93e-16!155;UBERON:0004119!1.57e-14!169;UBERON:0000925!1.57e-14!169;UBERON:0006595!1.57e-14!169;UBERON:0004921!5.50e-14!129;UBERON:0004185!5.50e-14!129;UBERON:0005911!1.63e-11!82;UBERON:0005409!8.91e-11!35;UBERON:0000160!2.81e-10!27;UBERON:0005153!4.00e-09!37;UBERON:0000466!9.59e-09!126;UBERON:0000077!1.03e-08!130;UBERON:0000464!5.18e-08!104;UBERON:0002048!8.50e-08!22;UBERON:0000117!8.50e-08!22;UBERON:0000171!8.50e-08!22;UBERON:0000170!8.50e-08!22;UBERON:0005597!8.50e-08!22;UBERON:0000118!8.50e-08!22;UBERON:0002294!1.33e-07!7;UBERON:0001173!1.33e-07!7;UBERON:0004912!1.33e-07!7;UBERON:0000344!5.91e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;8.03e-12;22!UBERON:0002108;1.66e-11;4!UBERON:0000160;1.89e-11;17!UBERON:0004921;2.63e-08;33!UBERON:0004911;1.23e-07;1!UBERON:0002171;4.33e-07;1!UBERON:0006518;4.33e-07;1!UBERON:0008949;4.33e-07;1!UBERON:0000101;4.33e-07;1!UBERON:0002167;4.33e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.31e-11,17;UBERON:0002108,1.39e-11,4;UBERON:0005409,1.55e-10,25;UBERON:0004911,1.27e-07,1;UBERON:0002171,5.50e-07,1;UBERON:0006518,5.50e-07,1;UBERON:0008949,5.50e-07,1;UBERON:0000101,5.50e-07,1;UBERON:0002167,5.50e-07,1 | |||
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| ||
|short_description=p8@EPCAM | |||
}} | }} |
Latest revision as of 12:17, 17 September 2015
Short description: | p8@EPCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EPCAM_5end |
Coexpression cluster: | C1908_smallcell_endometrioid_small_colon_temporal_iPS_duodenum |
Association with transcript: | 211bp_to_ENST00000490733_5end |
EntrezGene: | EPCAM |
HGNC: | 11529 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 1.27e-07 | 1 |
lung fibroblast | 3.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.31e-11 | 17 |
small intestine | 1.39e-11 | 4 |
gastrointestinal system | 1.55e-10 | 25 |
epithelium of female gonad | 1.27e-07 | 1 |
lower lobe of right lung | 5.50e-07 | 1 |
right lung lobe | 5.50e-07 | 1 |
lower lobe of lung | 5.50e-07 | 1 |
lobe of lung | 5.50e-07 | 1 |
right lung | 5.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.61e-09 | 106 |
adenocarcinoma | 3.93e-08 | 25 |
ovary epithelial cancer | 1.27e-07 | 1 |
female reproductive organ cancer | 1.72e-07 | 27 |
cell type cancer | 2.42e-07 | 143 |
reproductive organ cancer | 6.19e-07 | 29 |
vascular disease | 6.20e-07 | 1 |
ischemia | 6.20e-07 | 1 |
extrinsic cardiomyopathy | 6.20e-07 | 1 |
myocardial ischemia | 6.20e-07 | 1 |
myocardial infarction | 6.20e-07 | 1 |