FFCP PHASE1:Hg19::chr19:35981358..35981374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388533 | |EntrezGene=388533 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16313 | |HGNC=16313 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_uc002nzh.2_5end | |association_with_transcript=-2bp_to_uc002nzh.2_5end | ||
|cluster_id=chr19:35981358..35981374,- | |||
|coexpression_cluster_id=C202 | |coexpression_cluster_id=C202 | ||
|description=CAGE_peak_1_at_KRTDAP_5end | |description=CAGE_peak_1_at_KRTDAP_5end | ||
|id=chr19:35981358..35981374,- | |id=chr19:35981358..35981374,- | ||
|ontology_enrichment_celltype=CL:0002159!9.00e-15!13;CL:0000622!8.91e-14!5;CL:0000453!2.40e-12!5;CL:0002076!6.81e-12!43;CL:0000154!2.16e-11!6;CL:0002368!7.65e-10!13;CL:0002623!5.20e-09!3;CL:0000362!2.95e-08!8;CL:0002328!7.61e-08!3;CL:0000223!1.49e-07!59;CL:0000150!2.05e-07!9;CL:0002077!4.18e-07!33;CL:0000240!4.86e-07!6;CL:0000311!4.86e-07!6;CL:0000079!4.86e-07!6;CL:0000237!4.86e-07!6;CL:0000036!4.86e-07!6;CL:0000357!4.86e-07!6;CL:0000114!4.86e-07!6 | |ontology_enrichment_celltype=CL:0002159!9.00e-15!13;CL:0000622!8.91e-14!5;CL:0000453!2.40e-12!5;CL:0002076!6.81e-12!43;CL:0000154!2.16e-11!6;CL:0002368!7.65e-10!13;CL:0002623!5.20e-09!3;CL:0000362!2.95e-08!8;CL:0002328!7.61e-08!3;CL:0000223!1.49e-07!59;CL:0000150!2.05e-07!9;CL:0002077!4.18e-07!33;CL:0000240!4.86e-07!6;CL:0000311!4.86e-07!6;CL:0000079!4.86e-07!6;CL:0000237!4.86e-07!6;CL:0000036!4.86e-07!6;CL:0000357!4.86e-07!6;CL:0000114!4.86e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002159;9.58e-22;14!CL:0000622;3.57e-21;5!CL:0000154;1.35e-17;6!CL:0002623;1.61e-13;3!CL:0000453;5.82e-13;5!CL:0000150;1.27e-11;9!CL:0000362;2.11e-11;9!CL:0000317;2.14e-09;2!CL:1000448;2.14e-09;2!CL:0002308;2.14e-09;2!CL:0002140;2.14e-09;2!CL:0001014;2.23e-09;2!CL:0001016;2.23e-09;2!CL:0002251;3.22e-09;20!CL:0002077;3.51e-09;34!CL:0000575;1.08e-08;2!CL:0000312;4.95e-08;5!CL:0000990;3.16e-07;8!CL:0000240;9.40e-07;6!CL:0000311;9.40e-07;6!CL:0000079;9.40e-07;6!CL:0000237;9.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,8.66e-22,14;CL:0000622,3.57e-21,5;CL:0000154,1.35e-17,6;CL:0002623,1.61e-13,3;CL:0000453,5.91e-13,5;CL:0000150,1.27e-11,9;CL:0000362,2.11e-11,9;CL:0002077,5.97e-10,34;CL:0000317,2.14e-09,2;CL:1000448,2.14e-09,2;CL:0002308,2.14e-09,2;CL:0002140,2.14e-09,2;CL:0001014,2.23e-09,2;CL:0001016,2.23e-09,2;CL:0002251,3.27e-09,20;CL:0000575,1.04e-08,2;CL:0000312,4.95e-08,5;CL:0000990,3.19e-07,8;CL:0000240,9.40e-07,6;CL:0000311,9.40e-07,6;CL:0000079,9.40e-07,6;CL:0000237,9.40e-07,6;CL:0000036,9.40e-07,6;CL:0000357,9.40e-07,6;CL:0000114,9.40e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;9.40e-07;6!CL:0000114;9.40e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!4.94e-13!72;UBERON:0004119!2.83e-09!169;UBERON:0000925!2.83e-09!169;UBERON:0006595!2.83e-09!169;UBERON:0003102!6.54e-09!95;UBERON:0000166!9.26e-09!21;UBERON:0000065!1.31e-08!53;UBERON:0004815!7.61e-08!3;UBERON:0002031!7.61e-08!3;UBERON:0000161!8.74e-08!35;UBERON:0000165!2.00e-07!28;UBERON:0000930!2.00e-07!28 | |ontology_enrichment_uberon=UBERON:0001004!4.94e-13!72;UBERON:0004119!2.83e-09!169;UBERON:0000925!2.83e-09!169;UBERON:0006595!2.83e-09!169;UBERON:0003102!6.54e-09!95;UBERON:0000166!9.26e-09!21;UBERON:0000065!1.31e-08!53;UBERON:0004815!7.61e-08!3;UBERON:0002031!7.61e-08!3;UBERON:0000161!8.74e-08!35;UBERON:0000165!2.00e-07!28;UBERON:0000930!2.00e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.65e-10;28!UBERON:0000161;9.00e-10;19!UBERON:0000166;9.00e-10;19!UBERON:0001003;1.65e-09;15!UBERON:0007376;1.65e-09;15!UBERON:0002419;2.14e-09;2!UBERON:0007771;2.14e-09;2!UBERON:0003297;2.14e-09;2!UBERON:0001821;2.14e-09;2!UBERON:0003487;2.14e-09;2!UBERON:0001820;2.14e-09;2!UBERON:0002370;6.17e-09;2!UBERON:0005058;6.17e-09;2!UBERON:0009113;6.17e-09;2!UBERON:0000153;1.90e-07;54!UBERON:0010371;3.42e-07;31!UBERON:0001041;3.56e-07;14!UBERON:0001044;5.96e-07;6!UBERON:0003293;5.96e-07;6!UBERON:0003294;5.96e-07;6!UBERON:0010047;5.96e-07;6!UBERON:0003408;5.96e-07;6!UBERON:0000167;5.96e-07;6!UBERON:0001723;8.84e-07;3!UBERON:0001033;8.84e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,7.73e-14,22;UBERON:0000153,5.82e-13,62;UBERON:0007811,5.82e-13,62;UBERON:0003102,9.46e-12,99;UBERON:0003408,3.33e-10,10;UBERON:0001042,3.33e-10,10;UBERON:0009145,3.33e-10,10;UBERON:0000165,4.37e-10,29;UBERON:0000930,4.37e-10,29;UBERON:0001003,1.65e-09,15;UBERON:0007376,1.65e-09,15;UBERON:0007383,1.65e-09,15;UBERON:0000033,1.87e-09,56;UBERON:0002419,2.14e-09,2;UBERON:0007771,2.14e-09,2;UBERON:0003297,2.14e-09,2;UBERON:0001821,2.14e-09,2;UBERON:0003487,2.14e-09,2;UBERON:0001820,2.14e-09,2;UBERON:0005089,2.14e-09,2;UBERON:0005088,2.14e-09,2;UBERON:0006562,3.03e-09,11;UBERON:0001004,7.28e-09,74;UBERON:0001444,6.28e-08,49;UBERON:0000161,8.39e-08,36;UBERON:0008814,1.39e-07,18;UBERON:0001044,5.96e-07,6;UBERON:0003293,5.96e-07,6;UBERON:0003294,5.96e-07,6;UBERON:0010047,5.96e-07,6;UBERON:0000167,5.96e-07,6;UBERON:0001723,8.84e-07,3;UBERON:0001033,8.84e-07,3;UBERON:0010056,8.84e-07,3 | |||
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| ||
|short_description=p1@KRTDAP | |short_description=p1@KRTDAP | ||
}} | }} |
Latest revision as of 12:17, 17 September 2015
Short description: | p1@KRTDAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTDAP_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | -2bp_to_uc002nzh.2_5end |
EntrezGene: | KRTDAP |
HGNC: | 16313 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 8.66e-22 | 14 |
acinar cell | 3.57e-21 | 5 |
protein secreting cell | 1.35e-17 | 6 |
acinar cell of salivary gland | 1.61e-13 | 3 |
Langerhans cell | 5.91e-13 | 5 |
glandular epithelial cell | 1.27e-11 | 9 |
epidermal cell | 2.11e-11 | 9 |
ecto-epithelial cell | 5.97e-10 | 34 |
sebum secreting cell | 2.14e-09 | 2 |
epithelial cell of sweat gland | 2.14e-09 | 2 |
epithelial cell of skin gland | 2.14e-09 | 2 |
acinar cell of sebaceous gland | 2.14e-09 | 2 |
CD1a-positive Langerhans cell | 2.23e-09 | 2 |
immature CD1a-positive Langerhans cell | 2.23e-09 | 2 |
epithelial cell of alimentary canal | 3.27e-09 | 20 |
corneal epithelial cell | 1.04e-08 | 2 |
keratinocyte | 4.95e-08 | 5 |
conventional dendritic cell | 3.19e-07 | 8 |
stratified squamous epithelial cell | 9.40e-07 | 6 |
keratin accumulating cell | 9.40e-07 | 6 |
stratified epithelial cell | 9.40e-07 | 6 |
keratinizing barrier epithelial cell | 9.40e-07 | 6 |
epithelial fate stem cell | 9.40e-07 | 6 |
stratified epithelial stem cell | 9.40e-07 | 6 |
surface ectodermal cell | 9.40e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
oral opening | 7.73e-14 | 22 |
anterior region of body | 5.82e-13 | 62 |
craniocervical region | 5.82e-13 | 62 |
surface structure | 9.46e-12 | 99 |
gland of gut | 3.33e-10 | 10 |
chordate pharynx | 3.33e-10 | 10 |
pharyngeal region of foregut | 3.33e-10 | 10 |
mouth | 4.37e-10 | 29 |
stomodeum | 4.37e-10 | 29 |
skin epidermis | 1.65e-09 | 15 |
outer epithelium | 1.65e-09 | 15 |
enveloping layer of ectoderm | 1.65e-09 | 15 |
head | 1.87e-09 | 56 |
skin gland | 2.14e-09 | 2 |
epidermis gland | 2.14e-09 | 2 |
gland of integumental system | 2.14e-09 | 2 |
sebaceous gland | 2.14e-09 | 2 |
skin sebaceous gland | 2.14e-09 | 2 |
sweat gland | 2.14e-09 | 2 |
sweat gland placode | 2.14e-09 | 2 |
sebaceous gland placode | 2.14e-09 | 2 |
pharynx | 3.03e-09 | 11 |
respiratory system | 7.28e-09 | 74 |
subdivision of head | 6.28e-08 | 49 |
orifice | 8.39e-08 | 36 |
pharyngeal arch system | 1.39e-07 | 18 |
saliva-secreting gland | 5.96e-07 | 6 |
gland of oral region | 5.96e-07 | 6 |
gland of foregut | 5.96e-07 | 6 |
oral gland | 5.96e-07 | 6 |
oral cavity | 5.96e-07 | 6 |
tongue | 8.84e-07 | 3 |
gustatory system | 8.84e-07 | 3 |
future tongue | 8.84e-07 | 3 |