FFCP PHASE1:Hg19::chr2:47630200..47630211,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4436 | |EntrezGene=4436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7325 | |HGNC=7325 | ||
|TSSclassifier=strong | |||
|UniProt=C9J809,B4E2Z2 | |UniProt=C9J809,B4E2Z2 | ||
|association_with_transcript=0bp_to_ENST00000454849,ENST00000543555,uc010yoh.1_5end | |association_with_transcript=0bp_to_ENST00000454849,ENST00000543555,uc010yoh.1_5end | ||
|cluster_id=chr2:47630200..47630211,+ | |||
|description=CAGE_peak_4_at_MSH2_5end | |description=CAGE_peak_4_at_MSH2_5end | ||
|id=chr2:47630200..47630211,+ | |id=chr2:47630200..47630211,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.57e-25;5!CL:0000764;1.46e-11;2!CL:0000558;1.46e-11;2!CL:0002321;2.47e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.40e-26,5;CL:0000764,1.47e-11,2;CL:0000765,1.47e-11,2;CL:0000050,1.47e-11,2;CL:0000038,1.47e-11,2;CL:0000558,1.47e-11,2;CL:0000547,1.47e-11,2;CL:0000549,1.47e-11,2;CL:0000550,1.47e-11,2;CL:0000552,1.47e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.90e-09!106;DOID:0050687!7.04e-08!143;DOID:162!2.69e-07!235;DOID:14566!5.63e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0,0,0,0.85870796139317,0.410623275218653,0,0.458480434487708,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.309868802321207,0.142169232487422,0,0,0,0.217010870715852,1.34349284543955,0.647787332037959,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.628975936525128,0,0,0.16072558669708,0,0,0.730656615058536,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0,0.221533894583621,1.08321545506006,0,0.650296737799391,0.164437904603676,0.829050053357545,0,0,0,0,0.113309342697566,0,0.34362744548263,1.01207876807801,0,0,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,0.0945348171640679,0,0.966182642624386,0.654895377488563,0,0,1.62273696827342,0.348259474598534,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,1.13061588384802,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,1.12611480483322,0,0,0,0,0,0,0,0.633152558322899,0.397227542439656,0,0.354668382198357,0,1.06748995729705,0,0.311211035399766,0,0.490385709340376,0,0,0,0,0.570471821544449,0.149448680551801,1.76151747965647,0.485618833104395,0.280901613404497,0.204154171254893,0.245668634623536,0.206651562351531,1.18800285728205,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0.300091096084402,0,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0.252433774244115,0.276149695926898,0.646584227275248,0.355009592516614,0.604512589365842,0.847802961552438,0.57978255948989,0,0,2.6834215348511,4.5060121229305,2.90484857173796,1.7622379352613,1.7662459561294,2.18986415445498,0,0,0,0.464367928031979,0,0.236613600079688,0.168584690078102,0.482022059766964,0.441175890929576,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0.982827216677626,0,0,0.245976877086227,0.171567810298526,0,0,0.603173834469785,1.38882667737794,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,1.96973604869918,0,0.148631162288728,0,1.51183915378974,0,0.0895585227028483,0,0,0,0.088048434013226,0.207328115540772,0.288239906833923,1.51490920111656,0.888970520090367,0.381988425558278,0,0,0.205654985406647,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.537182889719687,0.224170287987055,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902838299183157,0,0,0,0.184369168541703,0.347534457872331,0,0,0,0.215714200818617,0,0,0,0.604780586659361,0,0,0,0.256278298511402,0.511707249066704,0,0,0.462629081407967,0,0.164254312027618,0,0,0.241718899183244,0,0.368323955743585,0,0,0,0,0.693138033939733,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,2.63111851975121,2.61435451024901,0.256450125116389,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0.193341436584244,0.308097234229289,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.356128142586949,0.826424576804891,0,1.02090169995667,0.6069466851333,0,0,0,0,0,0,0.9266210955196,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.320472213382419,0,0.490080431962063,0.185803175125719,0,0.0711418433484141,0,0,0,0,0.649243880549111,0,0,0.313359791546046,0,0.50787533340481,0.1605880751037,0.201799707191048,0,0,0.307240764308458,0.447352215784832,0,0.976940477010201,0.278406173895242,1.23087398947712,1.08182271390393,0,0,0.18714054040822,0.73254089635947,2.06312886974173,0.891547074219827,0.284136146806413,0.71623345421307,0.296964680832639,0.921482106297696,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0.20453736500431,0.123084805461069,0.622079175323615,0,0.358042349351218,1.02314474045374,0,0,0,0,0.556608588971108,0,0.260427761085233,0.524759999977174,0,0.341380344856499,3.0510438035132,0.472775363535873,0,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0.219385397153973,0.653630781113941,0.278847488557207,0.153900517007594,0.113942055847001,1.38338342632836,0.538545866458633,0,0,0.0915975934018623,0,0,0.470940769185074,0.166211681900156,0.225595660617181,0.392125068635479,0.167821586975843,0,0.158936578980379,0.210998064528027,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.539209063845416,0,1.1713222286267,0.182454789215666,0.586993856796269,0.485560759068186,0,0,0,0,0,0.311064574191741,1.99396161812156,1.323967823502,0.313932918407225,0,0.284609546029793,0,0,0.293977192243133,4.09178270927892,0.34945333648406,0,0,0.292357268344742,0.164230914106418,0.193978032976839,0,0,0,0,0.633107959558787,0.391102765469606,0.480952921509202,0.2134529947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| ||
|short_description=p4@MSH2 | |short_description=p4@MSH2 | ||
}} | }} |
Latest revision as of 12:18, 17 September 2015
Short description: | p4@MSH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000454849, ENST00000543555, uc010yoh.1_5end |
EntrezGene: | MSH2 |
HGNC: | 7325 |
UniProt: | C9J809B4E2Z2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.40e-26 | 5 |
erythroid lineage cell | 1.47e-11 | 2 |
erythroblast | 1.47e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 1.47e-11 | 2 |
erythroid progenitor cell | 1.47e-11 | 2 |
reticulocyte | 1.47e-11 | 2 |
proerythroblast | 1.47e-11 | 2 |
basophilic erythroblast | 1.47e-11 | 2 |
polychromatophilic erythroblast | 1.47e-11 | 2 |
orthochromatic erythroblast | 1.47e-11 | 2 |