FFCP PHASE1:Hg19::chr11:27528379..27528410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=497258 | |EntrezGene=497258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=20608 | |HGNC=20608 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000499008,ENST00000499568,ENST00000500662,ENST00000501176,ENST00000502161,ENST00000530686,ENST00000532965,NR_002832,NR_033312,NR_033313,NR_033314,NR_033315,uc001mrm.2,uc001mrn.2,uc001mro.2,uc001mrp.2,uc001mrq.3,uc001mrr.3,uc009yij.2,uc009yik.2,uc009yil.2,uc009yim.2,uc009yin.2,uc009yio.2,uc009yip.2,uc009yiq.2,uc009yir.2,uc009yis.2,uc009yit.2,uc009yiu.2,uc009yiv.2,uc009yiw.2,uc009yix.2,uc009yiy.2,uc009yiz.2,uc009yja.2,uc009yjb.2_5end | |association_with_transcript=0bp_to_ENST00000499008,ENST00000499568,ENST00000500662,ENST00000501176,ENST00000502161,ENST00000530686,ENST00000532965,NR_002832,NR_033312,NR_033313,NR_033314,NR_033315,uc001mrm.2,uc001mrn.2,uc001mro.2,uc001mrp.2,uc001mrq.3,uc001mrr.3,uc009yij.2,uc009yik.2,uc009yil.2,uc009yim.2,uc009yin.2,uc009yio.2,uc009yip.2,uc009yiq.2,uc009yir.2,uc009yis.2,uc009yit.2,uc009yiu.2,uc009yiv.2,uc009yiw.2,uc009yix.2,uc009yiy.2,uc009yiz.2,uc009yja.2,uc009yjb.2_5end | ||
|cluster_id=chr11:27528379..27528410,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_1_at_BDNF-AS1_5end | |description=CAGE_peak_1_at_BDNF-AS1_5end | ||
|id=chr11:27528379..27528410,+ | |id=chr11:27528379..27528410,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.46e-10;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.29e-27!57;UBERON:0005068!1.29e-27!57;UBERON:0006241!1.29e-27!57;UBERON:0007135!1.29e-27!57;UBERON:0007023!5.83e-26!115;UBERON:0002616!2.04e-25!59;UBERON:0000955!4.39e-25!69;UBERON:0006238!4.39e-25!69;UBERON:0001017!6.32e-25!82;UBERON:0005743!9.21e-25!86;UBERON:0000073!1.19e-24!94;UBERON:0001016!1.19e-24!94;UBERON:0002780!1.29e-23!41;UBERON:0001890!1.29e-23!41;UBERON:0006240!1.29e-23!41;UBERON:0003080!4.91e-22!42;UBERON:0003075!1.12e-21!86;UBERON:0007284!1.12e-21!86;UBERON:0000153!2.38e-21!129;UBERON:0007811!2.38e-21!129;UBERON:0002346!4.88e-21!90;UBERON:0004121!1.31e-20!169;UBERON:0000924!2.18e-20!173;UBERON:0006601!2.18e-20!173;UBERON:0000033!2.18e-20!123;UBERON:0001893!2.88e-19!34;UBERON:0002020!2.93e-19!34;UBERON:0003528!2.93e-19!34;UBERON:0002791!1.17e-18!33;UBERON:0001869!6.40e-18!32;UBERON:0003056!3.34e-16!61;UBERON:0002619!1.33e-13!22;UBERON:0000956!1.46e-13!25;UBERON:0000203!1.46e-13!25;UBERON:0001950!2.54e-12!20;UBERON:0002308!2.95e-07!9;UBERON:0000125!2.95e-07!9;UBERON:0002420!3.38e-07!9;UBERON:0007245!3.38e-07!9;UBERON:0010009!3.38e-07!9;UBERON:0010011!3.38e-07!9;UBERON:0000454!3.38e-07!9;UBERON:0003076!7.83e-07!15;UBERON:0003057!7.83e-07!15 | |ontology_enrichment_uberon=UBERON:0001049!1.29e-27!57;UBERON:0005068!1.29e-27!57;UBERON:0006241!1.29e-27!57;UBERON:0007135!1.29e-27!57;UBERON:0007023!5.83e-26!115;UBERON:0002616!2.04e-25!59;UBERON:0000955!4.39e-25!69;UBERON:0006238!4.39e-25!69;UBERON:0001017!6.32e-25!82;UBERON:0005743!9.21e-25!86;UBERON:0000073!1.19e-24!94;UBERON:0001016!1.19e-24!94;UBERON:0002780!1.29e-23!41;UBERON:0001890!1.29e-23!41;UBERON:0006240!1.29e-23!41;UBERON:0003080!4.91e-22!42;UBERON:0003075!1.12e-21!86;UBERON:0007284!1.12e-21!86;UBERON:0000153!2.38e-21!129;UBERON:0007811!2.38e-21!129;UBERON:0002346!4.88e-21!90;UBERON:0004121!1.31e-20!169;UBERON:0000924!2.18e-20!173;UBERON:0006601!2.18e-20!173;UBERON:0000033!2.18e-20!123;UBERON:0001893!2.88e-19!34;UBERON:0002020!2.93e-19!34;UBERON:0003528!2.93e-19!34;UBERON:0002791!1.17e-18!33;UBERON:0001869!6.40e-18!32;UBERON:0003056!3.34e-16!61;UBERON:0002619!1.33e-13!22;UBERON:0000956!1.46e-13!25;UBERON:0000203!1.46e-13!25;UBERON:0001950!2.54e-12!20;UBERON:0002308!2.95e-07!9;UBERON:0000125!2.95e-07!9;UBERON:0002420!3.38e-07!9;UBERON:0007245!3.38e-07!9;UBERON:0010009!3.38e-07!9;UBERON:0010011!3.38e-07!9;UBERON:0000454!3.38e-07!9;UBERON:0003076!7.83e-07!15;UBERON:0003057!7.83e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.54e-17;41!UBERON:0001890;2.54e-17;41!UBERON:0001893;9.79e-17;34!UBERON:0003528;1.10e-16;34!UBERON:0002020;1.10e-16;34!UBERON:0002791;1.72e-16;32!UBERON:0001869;1.92e-16;32!UBERON:0000073;1.94e-16;53!UBERON:0002616;1.94e-16;53!UBERON:0002619;5.47e-14;22!UBERON:0000956;1.23e-13;25!UBERON:0000203;1.23e-13;25!UBERON:0001017;7.17e-13;75!UBERON:0001950;1.13e-12;20!UBERON:0000955;3.39e-12;68!UBERON:0001016;4.35e-11;83!UBERON:0007023;1.61e-08;114!UBERON:0000125;1.91e-07;9!UBERON:0002308;1.91e-07;9!UBERON:0002420;2.31e-07;9!UBERON:0007245;2.31e-07;9!UBERON:0010009;2.31e-07;9!UBERON:0010011;2.31e-07;9!UBERON:0000454;2.31e-07;9 | |||
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| ||
|short_description=p1@BDNF-AS1 | |short_description=p1@BDNF-AS1 | ||
}} | }} |
Latest revision as of 12:20, 17 September 2015
Short description: | p1@BDNF-AS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BDNF-AS1_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000499008, ENST00000499568, ENST00000500662, ENST00000501176, ENST00000502161, ENST00000530686, ENST00000532965, NR_002832, NR_033312, NR_033313, NR_033314, NR_033315, uc001mrm.2, uc001mrn.2, uc001mro.2, uc001mrp.2, uc001mrq.3, uc001mrr.3, uc009yij.2, uc009yik.2, uc009yil.2, uc009yim.2, uc009yin.2, uc009yio.2, uc009yip.2, uc009yiq.2, uc009yir.2, uc009yis.2, uc009yit.2, uc009yiu.2, uc009yiv.2, uc009yiw.2, uc009yix.2, uc009yiy.2, uc009yiz.2, uc009yja.2, uc009yjb.2_5end |
EntrezGene: | BDNF-AS1 |
HGNC: | 20608 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data