FFCP PHASE1:Hg19::chr5:1883024..1883046,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=50805 | |EntrezGene=50805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6129 | |HGNC=6129 | ||
|TSSclassifier=strong | |||
|UniProt=P78413 | |UniProt=P78413 | ||
|association_with_transcript=-144bp_to_ENST00000231357,NM_016358,uc003jcz.2,uc011cmf.1_5end | |association_with_transcript=-144bp_to_ENST00000231357,NM_016358,uc003jcz.2,uc011cmf.1_5end | ||
|cluster_id=chr5:1883024..1883046,- | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_5_at_IRX4_5end | |description=CAGE_peak_5_at_IRX4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!3.91e-14!7;CL:0000586!3.91e-14!7;CL:0002327!5.85e-12!4;CL:0000076!3.09e-08!62;CL:0000066!8.32e-07!254 | |ontology_enrichment_celltype=CL:0000039!3.91e-14!7;CL:0000586!3.91e-14!7;CL:0002327!5.85e-12!4;CL:0000076!3.09e-08!62;CL:0000066!8.32e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002379;4.83e-18;1 | |ontology_enrichment_celltype_v019=CL:0002379;4.83e-18;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002379,5.26e-18,1 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.57e-09;2!UBERON:0010056;1.57e-09;2 | |ontology_enrichment_development_v019=UBERON:0008814;1.57e-09;2!UBERON:0010056;1.57e-09;2 | ||
|ontology_enrichment_disease=DOID:1749!2.06e-15!14;DOID:0050687!1.24e-07!143;DOID:305!1.53e-07!106;DOID:5093!1.62e-07!4;DOID:1612!1.62e-07!4;DOID:1287!2.29e-07!4;DOID:114!2.36e-07!2 | |ontology_enrichment_disease=DOID:1749!2.06e-15!14;DOID:0050687!1.24e-07!143;DOID:305!1.53e-07!106;DOID:5093!1.62e-07!4;DOID:1612!1.62e-07!4;DOID:1287!2.29e-07!4;DOID:114!2.36e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:3620;4.83e-18;1!DOID:3565;4.83e-18;1!DOID:178;1.03e-17;1!DOID:326;1.03e-17;1!DOID:3978;1.03e-17;1!DOID:3394;1.03e-17;1!DOID:5844;1.03e-17;1!DOID:5093;2.38e-17;4!DOID:1612;2.38e-17;4!DOID:114;1.57e-09;2 | |ontology_enrichment_disease_v019=DOID:3620;4.83e-18;1!DOID:3565;4.83e-18;1!DOID:178;1.03e-17;1!DOID:326;1.03e-17;1!DOID:3978;1.03e-17;1!DOID:3394;1.03e-17;1!DOID:5844;1.03e-17;1!DOID:5093;2.38e-17;4!DOID:1612;2.38e-17;4!DOID:114;1.57e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3620,5.26e-18,1;DOID:3565,5.26e-18,1;DOID:178,1.44e-17,1;DOID:326,1.44e-17,1;DOID:3978,1.44e-17,1;DOID:3394,1.44e-17,1;DOID:5844,1.44e-17,1;DOID:5093,2.19e-17,4;DOID:1612,2.19e-17,4;DOID:114,1.86e-09,2;DOID:7,4.81e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001911!5.85e-12!4;UBERON:0005333!5.85e-12!4;UBERON:0008425!5.85e-12!4;UBERON:0005311!5.85e-12!4 | |ontology_enrichment_uberon=UBERON:0001911!5.85e-12!4;UBERON:0005333!5.85e-12!4;UBERON:0008425!5.85e-12!4;UBERON:0005311!5.85e-12!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.83e-16;10!UBERON:0000178;9.13e-11;15!UBERON:0000179;9.13e-11;15!UBERON:0000463;9.13e-11;15!UBERON:0000310;1.67e-07;10!UBERON:0000478;6.22e-07;24!UBERON:0001443;6.74e-07;11!UBERON:0001723;9.11e-07;3!UBERON:0001033;9.11e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002331;7.83e-16;10!UBERON:0000178;9.13e-11;15!UBERON:0000179;9.13e-11;15!UBERON:0000463;9.13e-11;15!UBERON:0000310;1.67e-07;10!UBERON:0000478;6.22e-07;24!UBERON:0001443;6.74e-07;11!UBERON:0001723;9.11e-07;3!UBERON:0001033;9.11e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,7.83e-16,10;UBERON:0000358,7.83e-16,10;UBERON:0000307,7.83e-16,10;UBERON:0000091,7.83e-16,10;UBERON:0000087,7.83e-16,10;UBERON:0007010,7.83e-16,10;UBERON:0007806,7.83e-16,10;UBERON:0008780,7.83e-16,10;UBERON:0005728,7.83e-16,10;UBERON:0000178,9.14e-11,15;UBERON:0000179,9.14e-11,15;UBERON:0000463,9.14e-11,15;UBERON:0000310,1.62e-07,10;UBERON:0000478,6.22e-07,24;UBERON:0001443,6.54e-07,11;UBERON:0001723,7.70e-07,3;UBERON:0001033,7.70e-07,3;UBERON:0010056,7.70e-07,3 | |||
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| ||
|short_description=p5@IRX4 | |short_description=p5@IRX4 | ||
}} | }} |
Latest revision as of 12:21, 17 September 2015
Short description: | p5@IRX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IRX4_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -144bp_to_ENST00000231357, NM_016358, uc003jcz.2, uc011cmf.1_5end |
EntrezGene: | IRX4 |
HGNC: | 6129 |
UniProt: | P78413 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 5.26e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 7.83e-16 | 10 |
blastocyst | 7.83e-16 | 10 |
blastula | 7.83e-16 | 10 |
bilaminar disc | 7.83e-16 | 10 |
inner cell mass | 7.83e-16 | 10 |
cleaving embryo | 7.83e-16 | 10 |
connecting stalk | 7.83e-16 | 10 |
inner cell mass derived epiblast | 7.83e-16 | 10 |
extraembryonic mesoderm | 7.83e-16 | 10 |
blood | 9.14e-11 | 15 |
haemolymphatic fluid | 9.14e-11 | 15 |
organism substance | 9.14e-11 | 15 |
breast | 1.62e-07 | 10 |
extraembryonic structure | 6.22e-07 | 24 |
chest | 6.54e-07 | 11 |
tongue | 7.70e-07 | 3 |
gustatory system | 7.70e-07 | 3 |
future tongue | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 5.26e-18 | 1 |
meningioma | 5.26e-18 | 1 |
vascular disease | 1.44e-17 | 1 |
ischemia | 1.44e-17 | 1 |
extrinsic cardiomyopathy | 1.44e-17 | 1 |
myocardial ischemia | 1.44e-17 | 1 |
myocardial infarction | 1.44e-17 | 1 |
thoracic cancer | 2.19e-17 | 4 |
breast cancer | 2.19e-17 | 4 |
heart disease | 1.86e-09 | 2 |
disease of anatomical entity | 4.81e-07 | 39 |