FFCP PHASE1:Hg19::chr1:31971828..31971840,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149086 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000418618,NR_034112_5end | |||
|cluster_id=chr1:31971828..31971840,+ | |||
|coexpression_cluster_id=C141 | |||
|description=CAGE_peak_1_at_LOC149086_5end | |||
|id=chr1:31971828..31971840,+ | |||
|ontology_enrichment_celltype=CL:0000784!3.37e-21!3;CL:0000945!1.13e-09!24;CL:0000826!1.13e-09!24;CL:0000037!6.68e-08!172;CL:0000566!6.68e-08!172;CL:1001319!9.29e-08!1;CL:1000600!9.29e-08!1;CL:0000988!2.74e-07!182;CL:0000838!3.47e-07!52;CL:0000542!4.98e-07!53;CL:0000051!4.98e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.16e-20;3!CL:0000945;9.76e-10;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.16e-20,3;CL:0000945,9.64e-10,24;CL:0000826,9.64e-10,24;CL:0000037,2.47e-07,168;CL:0000988,6.65e-07,177;CL:0000838,8.06e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0004872;5.26e-09;7!UBERON:0006965;2.97e-08;2 | |||
|ontology_enrichment_disease=DOID:2531!1.76e-11!51;DOID:0060083!1.76e-11!51;DOID:1240!1.34e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.82e-07,51;DOID:0060083,5.82e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!5.33e-16!7;UBERON:0002106!6.00e-10!3;UBERON:0004854!6.00e-10!3;UBERON:0009034!6.00e-10!3;UBERON:0002095!6.00e-10!3;UBERON:0004782!6.00e-10!3;UBERON:0003281!6.00e-10!3;UBERON:0009664!6.00e-10!3;UBERON:0002296!6.00e-10!3;UBERON:0005602!6.00e-10!3;UBERON:0001179!6.00e-10!3;UBERON:0006293!6.00e-10!3;UBERON:0000945!4.14e-08!8;UBERON:0010039!4.14e-08!8;UBERON:0002370!5.23e-08!4;UBERON:0005058!5.23e-08!4;UBERON:0009113!5.23e-08!4;UBERON:0003295!5.23e-08!4;UBERON:0005562!5.23e-08!4;UBERON:0004913!6.19e-08!1;UBERON:0003703!6.19e-08!1;UBERON:0001174!6.19e-08!1;UBERON:0004914!6.19e-08!1;UBERON:0004645!9.29e-08!1;UBERON:0001256!9.29e-08!1;UBERON:0001259!9.29e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;9.30e-30;2!UBERON:0005058;9.30e-30;2!UBERON:0009113;9.30e-30;2!UBERON:0004177;1.81e-26;5!UBERON:0005057;1.81e-26;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.86e-19,7;UBERON:0005057,3.86e-19,7;UBERON:0002370,1.92e-15,4;UBERON:0005058,1.92e-15,4;UBERON:0009113,1.92e-15,4;UBERON:0003295,1.92e-15,4;UBERON:0005562,1.92e-15,4;UBERON:0003351,1.30e-10,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90370941842215,2.05251473624864,2.59745578335141,0,0,0,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57735936458013,2.85997455390064,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5951143859516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432807638929335,4.48193613095009,0.159426272728822,0,0,0,0,0,0.912938716132769,0,0,0,2.56940920165919,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,4.67722260752064,0,0,0,1.02314474045374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,3.59788161329744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.93992349999637,9.74573014444969,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0.162806537221949,0,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p1@LOC149086 | |||
}} |
Latest revision as of 13:28, 17 September 2015
Short description: | p1@LOC149086 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC149086_5end |
Coexpression cluster: | C141_Hodgkin_acute_thymus_chronic_vein_CD4_B |
Association with transcript: | 0bp_to_ENST00000418618, NR_034112_5end |
EntrezGene: | LOC149086 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.16e-20 | 3 |
lymphocyte of B lineage | 9.64e-10 | 24 |
pro-B cell | 9.64e-10 | 24 |
hematopoietic stem cell | 2.47e-07 | 168 |
hematopoietic cell | 6.65e-07 | 177 |
lymphoid lineage restricted progenitor cell | 8.06e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.86e-19 | 7 |
immune organ | 3.86e-19 | 7 |
thymus | 1.92e-15 | 4 |
hemolymphoid system gland | 1.92e-15 | 4 |
thymic region | 1.92e-15 | 4 |
pharyngeal gland | 1.92e-15 | 4 |
thymus primordium | 1.92e-15 | 4 |
pharyngeal epithelium | 1.30e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.82e-07 | 51 |
immune system cancer | 5.82e-07 | 51 |