FFCP PHASE1:Hg19::chr13:46785977..46785994,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TBN5 | |UniProt=Q5TBN5 | ||
|association_with_transcript=11bp_to_ENST00000442275_5end | |association_with_transcript=11bp_to_ENST00000442275_5end | ||
|cluster_id=chr13:46785977..46785994,- | |||
|description=CAGE_peak_26_at_LCP1_5end | |description=CAGE_peak_26_at_LCP1_5end | ||
|id=chr13:46785977..46785994,- | |id=chr13:46785977..46785994,- | ||
|ontology_enrichment_celltype=CL:0000037!1.37e-09!172;CL:0000566!1.37e-09!172;CL:0000738!1.73e-08!140;CL:0000988!3.47e-08!182;CL:0002032!7.94e-08!165;CL:0000837!7.94e-08!165;CL:0002031!1.19e-07!124;CL:0000791!7.44e-07!18;CL:0000789!7.44e-07!18;CL:0002420!7.44e-07!18;CL:0002419!7.44e-07!18;CL:0000790!7.44e-07!18;CL:0002087!8.55e-07!119 | |ontology_enrichment_celltype=CL:0000037!1.37e-09!172;CL:0000566!1.37e-09!172;CL:0000738!1.73e-08!140;CL:0000988!3.47e-08!182;CL:0002032!7.94e-08!165;CL:0000837!7.94e-08!165;CL:0002031!1.19e-07!124;CL:0000791!7.44e-07!18;CL:0000789!7.44e-07!18;CL:0002420!7.44e-07!18;CL:0002419!7.44e-07!18;CL:0000790!7.44e-07!18;CL:0002087!8.55e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.69e-10;5!CL:0002363;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.01e-09,5;CL:0002028,1.01e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006241;3.98e-16;3!UBERON:0003057;3.98e-16;3!UBERON:0006298;2.46e-12;1!UBERON:0008801;2.46e-12;1!UBERON:0007297;4.82e-07;2!CL:0000008;8.52e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.49e-09!115 | |ontology_enrichment_uberon=UBERON:0007023!1.49e-09!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.82e-23;2!UBERON:0001044;2.96e-17;6!UBERON:0003293;2.96e-17;6!UBERON:0003294;2.96e-17;6!UBERON:0010047;2.96e-17;6!UBERON:0003408;2.96e-17;6!UBERON:0000167;2.96e-17;6!UBERON:0002240;3.98e-16;3!UBERON:0005174;3.98e-16;3!UBERON:0001137;3.98e-16;3!UBERON:0001301;7.88e-13;1!UBERON:0001831;2.46e-12;1!UBERON:0001736;2.46e-12;1!UBERON:0001567;2.46e-12;1!UBERON:0002298;2.91e-08;6!UBERON:0001041;1.04e-07;14!UBERON:0002148;8.52e-07;2!UBERON:0003566;8.52e-07;2!UBERON:0006331;8.52e-07;2!UBERON:0009662;8.52e-07;2!UBERON:0001777;8.52e-07;2!UBERON:0004089;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,6.84e-23,2;UBERON:0001044,2.97e-17,6;UBERON:0003293,2.97e-17,6;UBERON:0003294,2.97e-17,6;UBERON:0010047,2.97e-17,6;UBERON:0000167,2.97e-17,6;UBERON:0002240,3.98e-16,3;UBERON:0005174,3.98e-16,3;UBERON:0001137,3.98e-16,3;UBERON:0001301,7.89e-13,1;UBERON:0001736,1.96e-12,1;UBERON:0006298,1.96e-12,1;UBERON:0001831,3.08e-12,1;UBERON:0001567,3.08e-12,1;UBERON:0008801,3.08e-12,1;UBERON:0003076,3.14e-12,15;UBERON:0003057,3.14e-12,15;UBERON:0003408,1.37e-10,10;UBERON:0002298,2.43e-08,6;UBERON:0002148,6.07e-07,2;UBERON:0006331,6.07e-07,2;UBERON:0009662,6.07e-07,2;UBERON:0004089,9.54e-07,2 | |||
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| ||
|short_description=p26@LCP1 | |short_description=p26@LCP1 | ||
}} | }} |
Latest revision as of 13:46, 17 September 2015
Short description: | p26@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_LCP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000442275_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | Q5TBN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.01e-09 | 5 |
basophil mast progenitor cell | 1.01e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 6.84e-23 | 2 |
saliva-secreting gland | 2.97e-17 | 6 |
gland of oral region | 2.97e-17 | 6 |
gland of foregut | 2.97e-17 | 6 |
oral gland | 2.97e-17 | 6 |
oral cavity | 2.97e-17 | 6 |
spinal cord | 3.98e-16 | 3 |
dorsal region element | 3.98e-16 | 3 |
dorsum | 3.98e-16 | 3 |
epididymis | 7.89e-13 | 1 |
submandibular gland | 1.96e-12 | 1 |
submandibular gland primordium | 1.96e-12 | 1 |
parotid gland | 3.08e-12 | 1 |
cheek | 3.08e-12 | 1 |
parotid gland primordium | 3.08e-12 | 1 |
posterior neural tube | 3.14e-12 | 15 |
chordal neural plate | 3.14e-12 | 15 |
gland of gut | 1.37e-10 | 10 |
brainstem | 2.43e-08 | 6 |
locus ceruleus | 6.07e-07 | 2 |
brainstem nucleus | 6.07e-07 | 2 |
hindbrain nucleus | 6.07e-07 | 2 |
midface | 9.54e-07 | 2 |