FFCP PHASE1:Hg19::chr16:686295..686374,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84326 | |EntrezGene=84326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14141 | |HGNC=14141 | ||
|TSSclassifier=strong | |||
|UniProt=D6REA6,F6TF62,F6VM53,Q96S19 | |UniProt=D6REA6,F6TF62,F6VM53,Q96S19 | ||
|association_with_transcript=0bp_to_ENST00000301686,ENST00000338401,ENST00000397664,ENST00000397665,ENST00000397666,NM_001040160,NM_001040161,NM_001040162,NM_001040165,NM_032366,uc002chv.1,uc002chw.1,uc002chz.1,uc002cia.1,uc002cib.1_5end | |association_with_transcript=0bp_to_ENST00000301686,ENST00000338401,ENST00000397664,ENST00000397665,ENST00000397666,NM_001040160,NM_001040161,NM_001040162,NM_001040165,NM_032366,uc002chv.1,uc002chw.1,uc002chz.1,uc002cia.1,uc002cib.1_5end | ||
|cluster_id=chr16:686295..686374,- | |||
|coexpression_cluster_id=C534 | |coexpression_cluster_id=C534 | ||
|description=CAGE_peak_1_at_C16orf13_5end | |description=CAGE_peak_1_at_C16orf13_5end | ||
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|ontology_enrichment_celltype=CL:0000222!8.88e-18!119;CL:0000220!3.80e-16!246;CL:0002321!7.55e-16!248;CL:0000055!2.82e-14!180;CL:0000183!3.78e-13!59;CL:0000192!1.38e-12!42;CL:0000514!1.38e-12!42;CL:0000187!4.46e-11!54;CL:0000393!4.97e-11!60;CL:0000211!4.97e-11!60;CL:0000359!9.68e-11!32;CL:0000680!1.45e-10!57;CL:0000056!1.45e-10!57;CL:0000355!1.45e-10!57;CL:0000066!2.24e-09!254;CL:0000548!6.10e-09!679;CL:0000004!6.10e-09!679;CL:0000255!6.10e-09!679;CL:0000012!8.79e-09!682;CL:0000213!4.65e-07!57;CL:0000215!4.65e-07!57 | |ontology_enrichment_celltype=CL:0000222!8.88e-18!119;CL:0000220!3.80e-16!246;CL:0002321!7.55e-16!248;CL:0000055!2.82e-14!180;CL:0000183!3.78e-13!59;CL:0000192!1.38e-12!42;CL:0000514!1.38e-12!42;CL:0000187!4.46e-11!54;CL:0000393!4.97e-11!60;CL:0000211!4.97e-11!60;CL:0000359!9.68e-11!32;CL:0000680!1.45e-10!57;CL:0000056!1.45e-10!57;CL:0000355!1.45e-10!57;CL:0000066!2.24e-09!254;CL:0000548!6.10e-09!679;CL:0000004!6.10e-09!679;CL:0000255!6.10e-09!679;CL:0000012!8.79e-09!682;CL:0000213!4.65e-07!57;CL:0000215!4.65e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.41e-10;32!CL:0000192;5.61e-09;43 | |ontology_enrichment_celltype_v019=CL:0000359;4.41e-10;32!CL:0000192;5.61e-09;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,9.16e-18,121;CL:0002321,6.25e-16,250;CL:0000192,4.07e-12,43;CL:0000514,4.07e-12,43;CL:0000359,9.68e-11,32;CL:0000187,9.99e-11,55;CL:0000393,1.05e-10,61;CL:0000211,1.05e-10,61;CL:0000680,3.05e-10,58;CL:0000056,3.05e-10,58;CL:0000355,3.05e-10,58;CL:0000066,1.73e-09,253;CL:0000213,2.73e-07,58;CL:0000215,2.73e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;5.61e-09;43 | |ontology_enrichment_development_v019=CL:0000514;5.61e-09;43 | ||
|ontology_enrichment_disease=DOID:14566!7.28e-08!239;DOID:162!1.60e-07!235;DOID:0050686!7.08e-07!137 | |ontology_enrichment_disease=DOID:14566!7.28e-08!239;DOID:162!1.60e-07!235;DOID:0050686!7.08e-07!137 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,7.28e-08,239;DOID:162,1.60e-07,235;DOID:0050686,7.08e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001637!9.99e-13!42;UBERON:0003509!9.99e-13!42;UBERON:0004572!9.99e-13!42;UBERON:0001981!1.05e-12!60;UBERON:0007500!1.05e-12!60;UBERON:0004537!1.05e-12!60;UBERON:0006965!1.05e-12!60;UBERON:0003914!1.33e-12!118;UBERON:0000055!5.74e-12!69;UBERON:0004872!1.03e-11!84;UBERON:0004290!1.07e-11!70;UBERON:0000914!1.50e-11!83;UBERON:0002329!1.50e-11!83;UBERON:0003077!1.50e-11!83;UBERON:0003059!1.50e-11!83;UBERON:0007282!1.50e-11!83;UBERON:0009618!1.50e-11!83;UBERON:0007285!1.50e-11!83;UBERON:0000490!1.76e-11!138;UBERON:0002049!2.09e-11!79;UBERON:0007798!2.09e-11!79;UBERON:0005256!2.39e-11!143;UBERON:0000486!3.12e-11!82;UBERON:0000483!4.08e-11!309;UBERON:0000119!8.62e-11!312;UBERON:0002100!1.46e-10!216;UBERON:0001134!1.59e-10!61;UBERON:0002036!1.59e-10!61;UBERON:0003082!1.59e-10!61;UBERON:0002385!2.33e-09!63;UBERON:0001015!2.33e-09!63;UBERON:0000383!2.33e-09!63;UBERON:0003104!3.72e-09!238;UBERON:0009142!3.72e-09!238;UBERON:0004573!9.44e-09!33;UBERON:0004571!9.44e-09!33;UBERON:0000025!7.04e-08!194;UBERON:0000481!7.87e-08!347;UBERON:0000475!1.60e-07!365;UBERON:0000477!1.70e-07!286;UBERON:0000487!5.82e-07!22;UBERON:0006914!7.33e-07!25;UBERON:0009569!9.65e-07!113 | |ontology_enrichment_uberon=UBERON:0001637!9.99e-13!42;UBERON:0003509!9.99e-13!42;UBERON:0004572!9.99e-13!42;UBERON:0001981!1.05e-12!60;UBERON:0007500!1.05e-12!60;UBERON:0004537!1.05e-12!60;UBERON:0006965!1.05e-12!60;UBERON:0003914!1.33e-12!118;UBERON:0000055!5.74e-12!69;UBERON:0004872!1.03e-11!84;UBERON:0004290!1.07e-11!70;UBERON:0000914!1.50e-11!83;UBERON:0002329!1.50e-11!83;UBERON:0003077!1.50e-11!83;UBERON:0003059!1.50e-11!83;UBERON:0007282!1.50e-11!83;UBERON:0009618!1.50e-11!83;UBERON:0007285!1.50e-11!83;UBERON:0000490!1.76e-11!138;UBERON:0002049!2.09e-11!79;UBERON:0007798!2.09e-11!79;UBERON:0005256!2.39e-11!143;UBERON:0000486!3.12e-11!82;UBERON:0000483!4.08e-11!309;UBERON:0000119!8.62e-11!312;UBERON:0002100!1.46e-10!216;UBERON:0001134!1.59e-10!61;UBERON:0002036!1.59e-10!61;UBERON:0003082!1.59e-10!61;UBERON:0002385!2.33e-09!63;UBERON:0001015!2.33e-09!63;UBERON:0000383!2.33e-09!63;UBERON:0003104!3.72e-09!238;UBERON:0009142!3.72e-09!238;UBERON:0004573!9.44e-09!33;UBERON:0004571!9.44e-09!33;UBERON:0000025!7.04e-08!194;UBERON:0000481!7.87e-08!347;UBERON:0000475!1.60e-07!365;UBERON:0000477!1.70e-07!286;UBERON:0000487!5.82e-07!22;UBERON:0006914!7.33e-07!25;UBERON:0009569!9.65e-07!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0003914;6.71e-09;74!UBERON:0001637;7.19e-09;42!UBERON:0003509;7.19e-09;42!UBERON:0004572;7.19e-09;42!UBERON:0007500;1.76e-08;56!UBERON:0001981;1.76e-08;56!UBERON:0004537;1.76e-08;56!UBERON:0004573;7.57e-08;33!UBERON:0004571;7.57e-08;33!UBERON:0000487;5.86e-07;22!UBERON:0006914;7.02e-07;25!UBERON:0000025;8.29e-07;93 | |ontology_enrichment_uberon_v019=UBERON:0003914;6.71e-09;74!UBERON:0001637;7.19e-09;42!UBERON:0003509;7.19e-09;42!UBERON:0004572;7.19e-09;42!UBERON:0007500;1.76e-08;56!UBERON:0001981;1.76e-08;56!UBERON:0004537;1.76e-08;56!UBERON:0004573;7.57e-08;33!UBERON:0004571;7.57e-08;33!UBERON:0000487;5.86e-07;22!UBERON:0006914;7.02e-07;25!UBERON:0000025;8.29e-07;93 | ||
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22207 | ||
|short_description=p1@C16orf13 | |short_description=p1@C16orf13 | ||
}} | }} |
Latest revision as of 13:54, 17 September 2015
Short description: | p1@C16orf13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C16orf13_5end |
Coexpression cluster: | C534_Mesenchymal_Alveolar_Renal_Placental_Fibroblast_Smooth_Tracheal |
Association with transcript: | 0bp_to_ENST00000301686, ENST00000338401, ENST00000397664, ENST00000397665, ENST00000397666, NM_001040160, NM_001040161, NM_001040162, NM_001040165, NM_032366, uc002chv.1, uc002chw.1, uc002chz.1, uc002cia.1, uc002cib.1_5end |
EntrezGene: | C16orf13 |
HGNC: | 14141 |
UniProt: | D6REA6F6TF62F6VM53Q96S19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 9.16e-18 | 121 |
embryonic cell | 6.25e-16 | 250 |
smooth muscle cell | 4.07e-12 | 43 |
smooth muscle myoblast | 4.07e-12 | 43 |
vascular associated smooth muscle cell | 9.68e-11 | 32 |
muscle cell | 9.99e-11 | 55 |
electrically responsive cell | 1.05e-10 | 61 |
electrically active cell | 1.05e-10 | 61 |
muscle precursor cell | 3.05e-10 | 58 |
myoblast | 3.05e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-10 | 58 |
epithelial cell | 1.73e-09 | 253 |
lining cell | 2.73e-07 | 58 |
barrier cell | 2.73e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.28e-08 | 239 |
cancer | 1.60e-07 | 235 |
organ system cancer | 7.08e-07 | 137 |