FFCP PHASE1:Hg19::chr9:5897587..5897603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2315 | |EntrezGene=2315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7124 | |HGNC=7124 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=23bp_to_ENST00000490518_5end | |association_with_transcript=23bp_to_ENST00000490518_5end | ||
|cluster_id=chr9:5897587..5897603,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_2_at_MLANA_5end | |description=CAGE_peak_2_at_MLANA_5end | ||
|id=chr9:5897587..5897603,+ | |id=chr9:5897587..5897603,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.95e-61!10;CL:0000541!2.95e-61!10;CL:0000147!1.16e-43!14;CL:0002567!2.38e-38!3;CL:0000710!1.91e-30!20;CL:0000075!1.96e-22!27;CL:0002077!2.91e-18!33;CL:0000325!2.27e-15!39;CL:0002566!5.85e-14!1;CL:0000333!6.88e-14!41;CL:0000453!9.62e-11!5;CL:0000133!1.29e-09!59;CL:0000221!6.25e-08!71 | |ontology_enrichment_celltype=CL:0000148!2.95e-61!10;CL:0000541!2.95e-61!10;CL:0000147!1.16e-43!14;CL:0002567!2.38e-38!3;CL:0000710!1.91e-30!20;CL:0000075!1.96e-22!27;CL:0002077!2.91e-18!33;CL:0000325!2.27e-15!39;CL:0002566!5.85e-14!1;CL:0000333!6.88e-14!41;CL:0000453!9.62e-11!5;CL:0000133!1.29e-09!59;CL:0000221!6.25e-08!71 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.28e-96;10!CL:0000147;4.55e-69;14!CL:0002567;9.99e-60;3!CL:0000710;2.21e-48;20!CL:0000075;7.54e-36;27!CL:0002077;4.38e-25;34!CL:0002566;4.22e-21;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.28e-96,10;CL:0000541,1.28e-96,10;CL:0000147,4.55e-69,14;CL:0002567,9.99e-60,3;CL:0000710,2.21e-48,20;CL:0000075,7.54e-36,27;CL:0002077,1.83e-28,34;CL:0000333,1.71e-22,41;CL:0002566,4.22e-21,1;CL:0000133,8.17e-16,59;CL:0000221,5.31e-13,72 | |||
|ontology_enrichment_development_v019=CL:0000133;1.03e-08;59!CL:0000221;2.34e-07;72 | |||
|ontology_enrichment_disease=DOID:1909!7.67e-26!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;6.70e-40;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,6.70e-40,2 | |||
|ontology_enrichment_uberon=UBERON:0007029!1.42e-13!1;UBERON:0001003!1.49e-08!14;UBERON:0007376!1.49e-08!14;UBERON:0007383!1.49e-08!14 | |ontology_enrichment_uberon=UBERON:0007029!1.42e-13!1;UBERON:0001003!1.49e-08!14;UBERON:0007376!1.49e-08!14;UBERON:0007383!1.49e-08!14 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p2@MLANA | |short_description=p2@MLANA | ||
}} | }} |
Latest revision as of 14:12, 17 September 2015
Short description: | p2@MLANA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MLANA_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 23bp_to_ENST00000490518_5end |
EntrezGene: | MLANA |
HGNC: | 7124 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.28e-96 | 10 |
melanoblast | 1.28e-96 | 10 |
pigment cell | 4.55e-69 | 14 |
light melanocyte | 9.99e-60 | 3 |
neurecto-epithelial cell | 2.21e-48 | 20 |
columnar/cuboidal epithelial cell | 7.54e-36 | 27 |
ecto-epithelial cell | 1.83e-28 | 34 |
migratory neural crest cell | 1.71e-22 | 41 |
dark melanocyte | 4.22e-21 | 1 |
neurectodermal cell | 8.17e-16 | 59 |
ectodermal cell | 5.31e-13 | 72 |
Ontology term | p-value | n |
---|---|---|
melanoma | 6.70e-40 | 2 |