FFCP PHASE1:Hg19::chr2:153475501..153475520,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=114793 | |EntrezGene=114793 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18267 | |HGNC=18267 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZN96 | |UniProt=Q6ZN96 | ||
|association_with_transcript=68bp_to_ENST00000421344_5end | |association_with_transcript=68bp_to_ENST00000421344_5end | ||
|cluster_id=chr2:153475501..153475520,+ | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_FMNL2_5end | |description=CAGE_peak_4_at_FMNL2_5end | ||
Latest revision as of 14:28, 17 September 2015
| Short description: | p4@FMNL2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_FMNL2_5end |
| Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
| Association with transcript: | 68bp_to_ENST00000421344_5end |
| EntrezGene: | FMNL2 |
| HGNC: | 18267 |
| UniProt: | Q6ZN96 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@FMNL2 |
|---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.02e-64 | 56 |
| neural rod | 2.02e-64 | 56 |
| future spinal cord | 2.02e-64 | 56 |
| neural keel | 2.02e-64 | 56 |
| regional part of nervous system | 2.24e-56 | 53 |
| regional part of brain | 2.24e-56 | 53 |
| brain | 8.48e-51 | 68 |
| future brain | 8.48e-51 | 68 |
| central nervous system | 6.38e-50 | 81 |
| nervous system | 9.27e-47 | 89 |
Showing 1 to 10 of 89 entries
