FFCP PHASE1:Hg19::chr6:2971849..2971875,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:2971849..2971875,- to FFCP PHASE1:Hg19::chr6:2971849..2971875,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier=strong | |||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=-30bp_to_ENST00000380546_5end | |||
|cluster_id=chr6:2971849..2971875,- | |||
|description=CAGE_peak_4_at_SERPINB6_5end | |||
|id=chr6:2971849..2971875,- | |||
|ontology_enrichment_celltype=CL:0000222!2.87e-21!119;CL:0000055!7.13e-17!180;CL:0000220!8.94e-16!246;CL:0002321!5.18e-15!248;CL:0000359!1.79e-12!32;CL:0000183!3.20e-12!59;CL:0000115!1.49e-11!35;CL:0000680!1.77e-11!57;CL:0000056!1.77e-11!57;CL:0000355!1.77e-11!57;CL:0000187!2.51e-11!54;CL:0000192!2.82e-11!42;CL:0000514!2.82e-11!42;CL:0000213!2.22e-10!57;CL:0000215!2.22e-10!57;CL:0002078!2.60e-10!44;CL:0002139!1.71e-09!24;CL:0002371!1.76e-09!591;CL:0000548!4.20e-09!679;CL:0000004!4.20e-09!679;CL:0000255!4.20e-09!679;CL:0000012!7.76e-09!682;CL:0000144!1.87e-08!625;CL:0000393!2.53e-08!60;CL:0000211!2.53e-08!60;CL:0000066!1.98e-07!254;CL:0000071!7.17e-07!18;CL:0002546!7.17e-07!18;CL:0000057!7.29e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.17e-11;32!CL:0000115;1.33e-10;36!CL:0002139;2.45e-09;24!CL:0000192;1.40e-08;43!CL:0002078;9.84e-08;45!CL:0000071;9.25e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.60e-22,121;CL:0002321,1.25e-15,250;CL:0000359,1.70e-12,32;CL:0000115,3.57e-12,36;CL:0000680,1.86e-11,58;CL:0000056,1.86e-11,58;CL:0000355,1.86e-11,58;CL:0000187,2.67e-11,55;CL:0000192,3.72e-11,43;CL:0000514,3.72e-11,43;CL:0000213,6.59e-11,58;CL:0000215,6.59e-11,58;CL:0002078,7.07e-11,45;CL:0002139,1.66e-09,24;CL:0000393,2.75e-08,61;CL:0000211,2.75e-08,61;CL:0000066,1.94e-07,253;CL:0000057,3.45e-07,76;CL:0000071,7.00e-07,18;CL:0002546,7.00e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000514;1.40e-08;43!CL:0002546;9.25e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.89e-22!79;UBERON:0007798!1.89e-22!79;UBERON:0001009!6.62e-20!113;UBERON:0004872!1.11e-19!84;UBERON:0000055!3.03e-19!69;UBERON:0004535!1.71e-18!110;UBERON:0001981!3.70e-17!60;UBERON:0007500!3.70e-17!60;UBERON:0004537!3.70e-17!60;UBERON:0006965!3.70e-17!60;UBERON:0003914!3.82e-17!118;UBERON:0000914!1.36e-14!83;UBERON:0002329!1.36e-14!83;UBERON:0003077!1.36e-14!83;UBERON:0003059!1.36e-14!83;UBERON:0007282!1.36e-14!83;UBERON:0009618!1.36e-14!83;UBERON:0007285!1.36e-14!83;UBERON:0000486!6.51e-14!82;UBERON:0001637!1.12e-13!42;UBERON:0003509!1.12e-13!42;UBERON:0004572!1.12e-13!42;UBERON:0004290!3.72e-13!70;UBERON:0005256!1.78e-12!143;UBERON:0000490!1.96e-11!138;UBERON:0000467!2.96e-11!625;UBERON:0000480!6.32e-11!626;UBERON:0002385!7.88e-11!63;UBERON:0001015!7.88e-11!63;UBERON:0000383!7.88e-11!63;UBERON:0001134!1.02e-10!61;UBERON:0002036!1.02e-10!61;UBERON:0003082!1.02e-10!61;UBERON:0000477!1.75e-10!286;UBERON:0004573!2.36e-10!33;UBERON:0004571!2.36e-10!33;UBERON:0000468!4.37e-10!659;UBERON:0000119!1.18e-09!312;UBERON:0000481!1.49e-09!347;UBERON:0000483!2.90e-09!309;UBERON:0002100!5.03e-09!216;UBERON:0000926!1.10e-08!448;UBERON:0004120!1.10e-08!448;UBERON:0006603!1.10e-08!448;UBERON:0003104!1.66e-08!238;UBERON:0009142!1.66e-08!238;UBERON:0007100!9.29e-08!27;UBERON:0003103!2.17e-07!69;UBERON:0004111!6.01e-07!241;UBERON:0001986!7.17e-07!18;UBERON:0004638!7.17e-07!18;UBERON:0004852!7.17e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;1.28e-09;75!UBERON:0007798;1.28e-09;75!UBERON:0001637;2.38e-09;42!UBERON:0003509;2.38e-09;42!UBERON:0004572;2.38e-09;42!UBERON:0000055;2.45e-09;65!UBERON:0007500;2.93e-09;56!UBERON:0001981;2.93e-09;56!UBERON:0004537;2.93e-09;56!UBERON:0004573;3.49e-09;33!UBERON:0004571;3.49e-09;33!UBERON:0003914;1.36e-08;74!UBERON:0007100;3.46e-07;25!UBERON:0004638;9.25e-07;18!UBERON:0001986;9.25e-07;18!UBERON:0004852;9.25e-07;18 | |||
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| ||
|short_description=p4@SERPINB6 | |||
}} | }} |
Latest revision as of 14:39, 17 September 2015
Short description: | p4@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000380546_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.60e-22 | 121 |
embryonic cell | 1.25e-15 | 250 |
vascular associated smooth muscle cell | 1.70e-12 | 32 |
endothelial cell | 3.57e-12 | 36 |
muscle precursor cell | 1.86e-11 | 58 |
myoblast | 1.86e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.86e-11 | 58 |
muscle cell | 2.67e-11 | 55 |
smooth muscle cell | 3.72e-11 | 43 |
smooth muscle myoblast | 3.72e-11 | 43 |
lining cell | 6.59e-11 | 58 |
barrier cell | 6.59e-11 | 58 |
meso-epithelial cell | 7.07e-11 | 45 |
endothelial cell of vascular tree | 1.66e-09 | 24 |
electrically responsive cell | 2.75e-08 | 61 |
electrically active cell | 2.75e-08 | 61 |
epithelial cell | 1.94e-07 | 253 |
fibroblast | 3.45e-07 | 76 |
blood vessel endothelial cell | 7.00e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.00e-07 | 18 |