FFCP PHASE1:Hg19::chr6:2972001..2972017,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5269 | |EntrezGene=5269 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |HGNC=8950 | ||
|TSSclassifier=strong | |||
|UniProt=P35237 | |UniProt=P35237 | ||
|association_with_transcript=72bp_to_ENST00000335686,uc003mum.2_5end | |association_with_transcript=72bp_to_ENST00000335686,uc003mum.2_5end | ||
|cluster_id=chr6:2972001..2972017,- | |||
|description=CAGE_peak_6_at_SERPINB6_5end | |description=CAGE_peak_6_at_SERPINB6_5end | ||
|id=chr6:2972001..2972017,- | |id=chr6:2972001..2972017,- | ||
|ontology_enrichment_celltype=CL:0000055!8.91e-22!180;CL:0000222!2.88e-21!119;CL:0000680!4.26e-14!57;CL:0000056!4.26e-14!57;CL:0000355!4.26e-14!57;CL:0000183!5.12e-14!59;CL:0000187!2.20e-13!54;CL:0000393!4.19e-12!60;CL:0000211!4.19e-12!60;CL:0000192!3.43e-11!42;CL:0000514!3.43e-11!42;CL:0000359!3.94e-11!32;CL:0000057!1.04e-09!75;CL:0000213!1.05e-08!57;CL:0000215!1.05e-08!57;CL:0000220!2.34e-08!246;CL:0000115!5.63e-08!35;CL:0002321!8.49e-08!248;CL:0002139!2.84e-07!24;CL:0002078!8.35e-07!44 | |ontology_enrichment_celltype=CL:0000055!8.91e-22!180;CL:0000222!2.88e-21!119;CL:0000680!4.26e-14!57;CL:0000056!4.26e-14!57;CL:0000355!4.26e-14!57;CL:0000183!5.12e-14!59;CL:0000187!2.20e-13!54;CL:0000393!4.19e-12!60;CL:0000211!4.19e-12!60;CL:0000192!3.43e-11!42;CL:0000514!3.43e-11!42;CL:0000359!3.94e-11!32;CL:0000057!1.04e-09!75;CL:0000213!1.05e-08!57;CL:0000215!1.05e-08!57;CL:0000220!2.34e-08!246;CL:0000115!5.63e-08!35;CL:0002321!8.49e-08!248;CL:0002139!2.84e-07!24;CL:0002078!8.35e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000359;3.47e-11;32!CL:0000192;5.45e-09;43!CL:0000187;1.34e-07;55!CL:0002139;3.00e-07;24!CL:0000115;3.11e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.89e-22,121;CL:0000680,7.95e-15,58;CL:0000056,7.95e-15,58;CL:0000355,7.95e-15,58;CL:0000187,4.40e-14,55;CL:0000393,1.31e-12,61;CL:0000211,1.31e-12,61;CL:0000192,8.41e-12,43;CL:0000514,8.41e-12,43;CL:0000359,1.68e-11,32;CL:0000057,1.16e-09,76;CL:0000213,7.67e-09,58;CL:0000215,7.67e-09,58;CL:0000115,1.33e-08,36;CL:0002321,1.12e-07,250;CL:0002139,1.71e-07,24;CL:0002078,4.96e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;5.45e-09;43!CL:0000355;6.40e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!2.24e-21!79;UBERON:0007798!2.24e-21!79;UBERON:0004872!2.36e-20!84;UBERON:0000055!1.37e-19!69;UBERON:0001009!5.79e-19!113;UBERON:0001981!5.43e-18!60;UBERON:0007500!5.43e-18!60;UBERON:0004537!5.43e-18!60;UBERON:0006965!5.43e-18!60;UBERON:0004535!2.00e-17!110;UBERON:0000477!6.73e-17!286;UBERON:0000468!4.58e-16!659;UBERON:0003914!1.91e-15!118;UBERON:0001134!7.07e-15!61;UBERON:0002036!7.07e-15!61;UBERON:0003082!7.07e-15!61;UBERON:0002385!7.89e-15!63;UBERON:0001015!7.89e-15!63;UBERON:0000383!7.89e-15!63;UBERON:0001637!1.18e-14!42;UBERON:0003509!1.18e-14!42;UBERON:0004572!1.18e-14!42;UBERON:0000467!9.94e-14!625;UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0004290!1.84e-13!70;UBERON:0000480!2.10e-13!626;UBERON:0004111!7.49e-13!241;UBERON:0000490!1.65e-12!138;UBERON:0000481!1.54e-11!347;UBERON:0004573!3.85e-11!33;UBERON:0004571!3.85e-11!33;UBERON:0005256!6.32e-11!143;UBERON:0000486!1.05e-10!82;UBERON:0007100!1.93e-10!27;UBERON:0000119!8.85e-10!312;UBERON:0002050!1.08e-09!605;UBERON:0005423!1.08e-09!605;UBERON:0000483!1.10e-09!309;UBERON:0000025!1.35e-09!194;UBERON:0000923!1.44e-09!604;UBERON:0005291!1.44e-09!604;UBERON:0006598!1.44e-09!604;UBERON:0002532!1.44e-09!604;UBERON:0000475!2.83e-09!365;UBERON:0000922!7.31e-09!612;UBERON:0000948!1.10e-08!24;UBERON:0005498!1.10e-08!24;UBERON:0004140!1.10e-08!24;UBERON:0009881!1.10e-08!24;UBERON:0004141!1.10e-08!24;UBERON:0003084!1.10e-08!24;UBERON:0007005!1.10e-08!24;UBERON:0004139!1.10e-08!24;UBERON:0004291!1.10e-08!24;UBERON:0000926!1.30e-08!448;UBERON:0004120!1.30e-08!448;UBERON:0006603!1.30e-08!448;UBERON:0003104!4.10e-08!238;UBERON:0009142!4.10e-08!238;UBERON:0003103!1.18e-07!69;UBERON:0002100!1.25e-07!216 | |ontology_enrichment_uberon=UBERON:0002049!2.24e-21!79;UBERON:0007798!2.24e-21!79;UBERON:0004872!2.36e-20!84;UBERON:0000055!1.37e-19!69;UBERON:0001009!5.79e-19!113;UBERON:0001981!5.43e-18!60;UBERON:0007500!5.43e-18!60;UBERON:0004537!5.43e-18!60;UBERON:0006965!5.43e-18!60;UBERON:0004535!2.00e-17!110;UBERON:0000477!6.73e-17!286;UBERON:0000468!4.58e-16!659;UBERON:0003914!1.91e-15!118;UBERON:0001134!7.07e-15!61;UBERON:0002036!7.07e-15!61;UBERON:0003082!7.07e-15!61;UBERON:0002385!7.89e-15!63;UBERON:0001015!7.89e-15!63;UBERON:0000383!7.89e-15!63;UBERON:0001637!1.18e-14!42;UBERON:0003509!1.18e-14!42;UBERON:0004572!1.18e-14!42;UBERON:0000467!9.94e-14!625;UBERON:0000914!1.06e-13!83;UBERON:0002329!1.06e-13!83;UBERON:0003077!1.06e-13!83;UBERON:0003059!1.06e-13!83;UBERON:0007282!1.06e-13!83;UBERON:0009618!1.06e-13!83;UBERON:0007285!1.06e-13!83;UBERON:0004290!1.84e-13!70;UBERON:0000480!2.10e-13!626;UBERON:0004111!7.49e-13!241;UBERON:0000490!1.65e-12!138;UBERON:0000481!1.54e-11!347;UBERON:0004573!3.85e-11!33;UBERON:0004571!3.85e-11!33;UBERON:0005256!6.32e-11!143;UBERON:0000486!1.05e-10!82;UBERON:0007100!1.93e-10!27;UBERON:0000119!8.85e-10!312;UBERON:0002050!1.08e-09!605;UBERON:0005423!1.08e-09!605;UBERON:0000483!1.10e-09!309;UBERON:0000025!1.35e-09!194;UBERON:0000923!1.44e-09!604;UBERON:0005291!1.44e-09!604;UBERON:0006598!1.44e-09!604;UBERON:0002532!1.44e-09!604;UBERON:0000475!2.83e-09!365;UBERON:0000922!7.31e-09!612;UBERON:0000948!1.10e-08!24;UBERON:0005498!1.10e-08!24;UBERON:0004140!1.10e-08!24;UBERON:0009881!1.10e-08!24;UBERON:0004141!1.10e-08!24;UBERON:0003084!1.10e-08!24;UBERON:0007005!1.10e-08!24;UBERON:0004139!1.10e-08!24;UBERON:0004291!1.10e-08!24;UBERON:0000926!1.30e-08!448;UBERON:0004120!1.30e-08!448;UBERON:0006603!1.30e-08!448;UBERON:0003104!4.10e-08!238;UBERON:0009142!4.10e-08!238;UBERON:0003103!1.18e-07!69;UBERON:0002100!1.25e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0001637;9.36e-11;42!UBERON:0003509;9.36e-11;42!UBERON:0004572;9.36e-11;42!UBERON:0004573;3.20e-10;33!UBERON:0004571;3.20e-10;33!UBERON:0007100;6.35e-10;25!UBERON:0000055;4.06e-09;65!UBERON:0002049;6.53e-09;75!UBERON:0007798;6.53e-09;75!UBERON:0007500;9.21e-09;56!UBERON:0001981;9.21e-09;56!UBERON:0004537;9.21e-09;56!UBERON:0000948;4.30e-08;22!UBERON:0002385;8.93e-07;31!UBERON:0001015;8.93e-07;31!UBERON:0000383;8.93e-07;31 | |||
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| ||
|short_description=p6@SERPINB6 | |short_description=p6@SERPINB6 | ||
}} | }} |
Latest revision as of 14:41, 17 September 2015
Short description: | p6@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 72bp_to_ENST00000335686, uc003mum.2_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.89e-22 | 121 |
muscle precursor cell | 7.95e-15 | 58 |
myoblast | 7.95e-15 | 58 |
multi-potent skeletal muscle stem cell | 7.95e-15 | 58 |
muscle cell | 4.40e-14 | 55 |
electrically responsive cell | 1.31e-12 | 61 |
electrically active cell | 1.31e-12 | 61 |
smooth muscle cell | 8.41e-12 | 43 |
smooth muscle myoblast | 8.41e-12 | 43 |
vascular associated smooth muscle cell | 1.68e-11 | 32 |
fibroblast | 1.16e-09 | 76 |
lining cell | 7.67e-09 | 58 |
barrier cell | 7.67e-09 | 58 |
endothelial cell | 1.33e-08 | 36 |
embryonic cell | 1.12e-07 | 250 |
endothelial cell of vascular tree | 1.71e-07 | 24 |
meso-epithelial cell | 4.96e-07 | 45 |