FFCP PHASE1:Hg19::chr8:23564065..23564087,-: Difference between revisions
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|id=chr8:23564065..23564087,-
|short_description=p1@NKX2-6
|description=CAGE_peak_1_at_NKX2-6_5end
|association_with_transcript=-143bp_to_ENST00000418222,uc011kzy.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=137814 | |EntrezGene=137814 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32940 | |HGNC=32940 | ||
|TSSclassifier=strong | |||
|UniProt=C9JML6 | |UniProt=C9JML6 | ||
|association_with_transcript=-143bp_to_ENST00000418222,uc011kzy.1_5end | |||
|cluster_id=chr8:23564065..23564087,- | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_1_at_NKX2-6_5end | |||
|id=chr8:23564065..23564087,- | |||
|ontology_enrichment_celltype=CL:0002620!9.73e-26!23;CL:0000057!3.77e-23!75;CL:0000055!4.78e-16!180;CL:0002334!2.22e-10!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;8.73e-28;23!CL:0002573;3.19e-12;2!CL:0000057;1.17e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.20e-28,23;CL:0000057,8.32e-14,76;CL:0002573,2.54e-12,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.63e-13!5;DOID:450!3.63e-13!5;DOID:66!3.63e-13!5;DOID:423!3.63e-13!5;DOID:0080000!3.63e-13!5;DOID:11722!3.63e-13!5 | |||
|ontology_enrichment_disease_v019=DOID:17;8.98e-27;5!DOID:450;8.98e-27;5!DOID:66;8.98e-27;5!DOID:423;8.98e-27;5!DOID:0080000;8.98e-27;5!DOID:11722;8.98e-27;5!DOID:0060085;3.74e-10;1!DOID:3165;3.74e-10;1!DOID:0060121;3.74e-10;1!DOID:2438;3.74e-10;1!DOID:4418;3.74e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.88e-27,5;DOID:450,6.88e-27,5;DOID:66,6.88e-27,5;DOID:423,6.88e-27,5;DOID:0080000,6.88e-27,5;DOID:11722,6.88e-27,5;DOID:0060085,3.74e-10,1;DOID:3165,3.74e-10,1;DOID:0060121,3.74e-10,1;DOID:2438,3.74e-10,1;DOID:4418,3.74e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002097!6.19e-16!40;UBERON:0002199!7.07e-16!45;UBERON:0002416!7.07e-16!45;UBERON:0003102!5.59e-14!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.36e-15;41!UBERON:0002199;1.04e-12;46!UBERON:0002416;1.04e-12;46!UBERON:0003102;9.95e-10;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.93e-19,41;UBERON:0002199,1.58e-16,46;UBERON:0002416,1.58e-16,46;UBERON:0003102,2.11e-08,99 | |||
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|short_description=p1@NKX2-6 | |||
}} | }} |
Latest revision as of 14:43, 17 September 2015
Short description: | p1@NKX2-6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-6_5end |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | -143bp_to_ENST00000418222, uc011kzy.1_5end |
EntrezGene: | NKX2-6 |
HGNC: | 32940 |
UniProt: | C9JML6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.20e-28 | 23 |
fibroblast | 8.32e-14 | 76 |
Schwann cell | 2.54e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
skin of body | 9.93e-19 | 41 |
integument | 1.58e-16 | 46 |
integumental system | 1.58e-16 | 46 |
surface structure | 2.11e-08 | 99 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.88e-27 | 5 |
myotonic disease | 6.88e-27 | 5 |
muscle tissue disease | 6.88e-27 | 5 |
myopathy | 6.88e-27 | 5 |
muscular disease | 6.88e-27 | 5 |
myotonic dystrophy | 6.88e-27 | 5 |
organ system benign neoplasm | 3.74e-10 | 1 |
skin benign neoplasm | 3.74e-10 | 1 |
integumentary system benign neoplasm | 3.74e-10 | 1 |
dermis tumor | 3.74e-10 | 1 |
cutaneous fibrous histiocytoma | 3.74e-10 | 1 |