FFCP PHASE1:Hg19::chr13:48612067..48612134,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8803 | |EntrezGene=8803 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11448 | |HGNC=11448 | ||
|TSSclassifier=strong | |||
|UniProt=F5GXC8 | |UniProt=F5GXC8 | ||
|association_with_transcript=0bp_to_ENST00000543413,uc010tgd.1_5end | |association_with_transcript=0bp_to_ENST00000543413,uc010tgd.1_5end | ||
|cluster_id=chr13:48612067..48612134,- | |||
|description=CAGE_peak_2_at_SUCLA2_5end | |description=CAGE_peak_2_at_SUCLA2_5end | ||
|id=chr13:48612067..48612134,- | |id=chr13:48612067..48612134,- | ||
|ontology_enrichment_celltype=CL:0000542!1.60e-16!53;CL:0000051!1.60e-16!53;CL:0000838!1.80e-16!52;CL:0000037!1.03e-11!172;CL:0000566!1.03e-11!172;CL:0000988!1.46e-11!182;CL:0000791!4.79e-11!18;CL:0000789!4.79e-11!18;CL:0002420!4.79e-11!18;CL:0002419!4.79e-11!18;CL:0000790!4.79e-11!18;CL:0000084!7.53e-11!25;CL:0000827!7.53e-11!25;CL:0002032!1.52e-09!165;CL:0000837!1.52e-09!165;CL:0002087!2.04e-09!119;CL:0000738!2.45e-08!140;CL:0002031!3.17e-08!124;CL:0000625!7.17e-07!11 | |ontology_enrichment_celltype=CL:0000542!1.60e-16!53;CL:0000051!1.60e-16!53;CL:0000838!1.80e-16!52;CL:0000037!1.03e-11!172;CL:0000566!1.03e-11!172;CL:0000988!1.46e-11!182;CL:0000791!4.79e-11!18;CL:0000789!4.79e-11!18;CL:0002420!4.79e-11!18;CL:0002419!4.79e-11!18;CL:0000790!4.79e-11!18;CL:0000084!7.53e-11!25;CL:0000827!7.53e-11!25;CL:0002032!1.52e-09!165;CL:0000837!1.52e-09!165;CL:0002087!2.04e-09!119;CL:0000738!2.45e-08!140;CL:0002031!3.17e-08!124;CL:0000625!7.17e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.34e-11;18!CL:0000789;4.34e-11;18!CL:0002419;4.34e-11;18!CL:0000084;4.43e-11;25!CL:0000542;3.96e-10;53!CL:0000625;6.95e-07;11 | |ontology_enrichment_celltype_v019=CL:0000791;4.34e-11;18!CL:0000789;4.34e-11;18!CL:0002419;4.34e-11;18!CL:0000084;4.43e-11;25!CL:0000542;3.96e-10;53!CL:0000625;6.95e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.60e-16,53;CL:0000051,1.60e-16,53;CL:0000838,1.80e-16,52;CL:0000037,3.76e-12,168;CL:0000988,5.39e-12,177;CL:0000791,4.79e-11,18;CL:0000789,4.79e-11,18;CL:0002420,4.79e-11,18;CL:0002419,4.79e-11,18;CL:0000790,4.79e-11,18;CL:0000084,7.53e-11,25;CL:0000827,7.53e-11,25;CL:0002032,6.29e-10,161;CL:0000837,6.29e-10,161;CL:0002087,6.60e-10,115;CL:0000738,1.00e-08,136;CL:0002031,1.20e-08,120;CL:0000625,7.17e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;4.34e-11;18!CL:0000051;3.96e-10;53 | |ontology_enrichment_development_v019=CL:0000790;4.34e-11;18!CL:0000051;3.96e-10;53 | ||
|ontology_enrichment_disease=DOID:2531!1.59e-07!51;DOID:0060083!1.59e-07!51;DOID:1240!8.86e-07!39 | |ontology_enrichment_disease=DOID:2531!1.59e-07!51;DOID:0060083!1.59e-07!51;DOID:1240!8.86e-07!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,1.59e-07,51;DOID:0060083,1.59e-07,51;DOID:1240,8.86e-07,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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2297436 | ||
|short_description=p2@SUCLA2 | |short_description=p2@SUCLA2 | ||
}} | }} |
Latest revision as of 14:46, 17 September 2015
Short description: | p2@SUCLA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUCLA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000543413, uc010tgd.1_5end |
EntrezGene: | SUCLA2 |
HGNC: | 11448 |
UniProt: | F5GXC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.60e-16 | 53 |
common lymphoid progenitor | 1.60e-16 | 53 |
lymphoid lineage restricted progenitor cell | 1.80e-16 | 52 |
hematopoietic stem cell | 3.76e-12 | 168 |
hematopoietic cell | 5.39e-12 | 177 |
mature alpha-beta T cell | 4.79e-11 | 18 |
alpha-beta T cell | 4.79e-11 | 18 |
immature T cell | 4.79e-11 | 18 |
mature T cell | 4.79e-11 | 18 |
immature alpha-beta T cell | 4.79e-11 | 18 |
T cell | 7.53e-11 | 25 |
pro-T cell | 7.53e-11 | 25 |
hematopoietic oligopotent progenitor cell | 6.29e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.29e-10 | 161 |
nongranular leukocyte | 6.60e-10 | 115 |
leukocyte | 1.00e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 1.20e-08 | 120 |
CD8-positive, alpha-beta T cell | 7.17e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.59e-07 | 51 |
immune system cancer | 1.59e-07 | 51 |
leukemia | 8.86e-07 | 39 |