FFCP PHASE1:Hg19::chr13:48806773..48806784,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:48806773..48806784,+
|short_description=p14@ITM2B
|description=CAGE_peak_14_at_ITM2B_5end
|association_with_transcript=-489bp_to_NM_021999,uc001vbz.3_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9445 | |EntrezGene=9445 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6174 | |HGNC=6174 | ||
|TSSclassifier=strong | |||
|UniProt=Q5W0A3,Q9Y287 | |UniProt=Q5W0A3,Q9Y287 | ||
|association_with_transcript=-489bp_to_NM_021999,uc001vbz.3_5end | |||
|cluster_id=chr13:48806773..48806784,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_14_at_ITM2B_5end | |||
|id=chr13:48806773..48806784,+ | |||
|ontology_enrichment_celltype=CL:0002274!4.37e-15!5;CL:0000457!4.37e-15!5;CL:0002191!4.37e-15!5;CL:0000097!4.37e-15!5;CL:0000831!4.37e-15!5;CL:0002028!4.37e-15!5;CL:0000163!3.50e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.05e-32;5!CL:0000771;5.69e-21;2!CL:0000163;1.03e-18;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.05e-32,5;CL:0002028,1.05e-32,5;CL:0000771,5.70e-21,2;CL:0000163,1.03e-18,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.89e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.61e-23!115;UBERON:0001950!2.80e-09!20;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0002619!2.54e-08!22;UBERON:0001869!6.45e-08!32;UBERON:0005743!1.09e-07!86;UBERON:0002791!1.28e-07!33;UBERON:0001017!2.25e-07!82;UBERON:0002020!2.46e-07!34;UBERON:0003528!2.46e-07!34;UBERON:0001893!2.46e-07!34;UBERON:0000955!2.47e-07!69;UBERON:0006238!2.47e-07!69;UBERON:0000956!3.64e-07!25;UBERON:0000203!3.64e-07!25;UBERON:0002616!5.18e-07!59;UBERON:0001870!6.99e-07!2;UBERON:0000153!7.01e-07!129;UBERON:0007811!7.01e-07!129;UBERON:0003075!8.48e-07!86;UBERON:0007284!8.48e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.55e-27;6!UBERON:0002680;1.61e-18;9!UBERON:0001895;1.61e-18;9!UBERON:0004733;3.59e-14;12!UBERON:0002028;3.59e-14;12!UBERON:0004732;3.64e-13;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.55e-27,6;UBERON:0006215,3.55e-27,6;UBERON:0002680,1.61e-18,9;UBERON:0001895,1.61e-18,9;UBERON:0010092,1.61e-18,9;UBERON:0004733,3.59e-14,12;UBERON:0002028,3.59e-14,12;UBERON:0007277,3.59e-14,12;UBERON:0004732,3.64e-13,13;UBERON:0003076,1.50e-11,15;UBERON:0003057,1.50e-11,15 | |||
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| ||
|short_description=p14@ITM2B | |||
}} | }} |
Latest revision as of 14:55, 17 September 2015
Short description: | p14@ITM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ITM2B_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | -489bp_to_NM_021999, uc001vbz.3_5end |
EntrezGene: | ITM2B |
HGNC: | 6174 |
UniProt: | Q5W0A3Q9Y287 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.05e-32 | 5 |
basophil mast progenitor cell | 1.05e-32 | 5 |
eosinophil | 5.70e-21 | 2 |
endocrine cell | 1.03e-18 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.55e-27 | 6 |
rhombic lip | 3.55e-27 | 6 |
regional part of metencephalon | 1.61e-18 | 9 |
metencephalon | 1.61e-18 | 9 |
future metencephalon | 1.61e-18 | 9 |
segmental subdivision of hindbrain | 3.59e-14 | 12 |
hindbrain | 3.59e-14 | 12 |
presumptive hindbrain | 3.59e-14 | 12 |
segmental subdivision of nervous system | 3.64e-13 | 13 |
posterior neural tube | 1.50e-11 | 15 |
chordal neural plate | 1.50e-11 | 15 |