FFCP PHASE1:Hg19::chr3:195808952..195808972,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7037 | |EntrezGene=7037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11763 | |HGNC=11763 | ||
|TSSclassifier=strong | |||
|UniProt=P02786,G3V0E5,F8WBE5,F5H6B1,Q7Z3E0,A8K6Q8 | |UniProt=P02786,G3V0E5,F8WBE5,F5H6B1,Q7Z3E0,A8K6Q8 | ||
|association_with_transcript=0bp_to_ENST00000392396,ENST00000420415,ENST00000421258,ENST00000464011,ENST00000535031,ENST00000540528,NM_003234,uc003fvz.3_5end | |association_with_transcript=0bp_to_ENST00000392396,ENST00000420415,ENST00000421258,ENST00000464011,ENST00000535031,ENST00000540528,NM_003234,uc003fvz.3_5end | ||
|cluster_id=chr3:195808952..195808972,- | |||
|coexpression_cluster_id=C33 | |coexpression_cluster_id=C33 | ||
|description=CAGE_peak_1_at_TFRC_5end | |description=CAGE_peak_1_at_TFRC_5end | ||
|id=chr3:195808952..195808972,- | |id=chr3:195808952..195808972,- | ||
|ontology_enrichment_celltype=CL:0000037!3.44e-11!172;CL:0000566!3.44e-11!172;CL:0002032!1.27e-10!165;CL:0000837!1.27e-10!165;CL:0000012!3.56e-10!682;CL:0000988!5.98e-10!182;CL:0000548!2.99e-09!679;CL:0000004!2.99e-09!679;CL:0000255!2.99e-09!679;CL:0000763!6.76e-09!112;CL:0000049!6.76e-09!112 | |ontology_enrichment_celltype=CL:0000037!3.44e-11!172;CL:0000566!3.44e-11!172;CL:0002032!1.27e-10!165;CL:0000837!1.27e-10!165;CL:0000012!3.56e-10!682;CL:0000988!5.98e-10!182;CL:0000548!2.99e-09!679;CL:0000004!2.99e-09!679;CL:0000255!2.99e-09!679;CL:0000763!6.76e-09!112;CL:0000049!6.76e-09!112 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.43e-10,168;CL:0002032,1.92e-09,161;CL:0000837,1.92e-09,161;CL:0000988,3.46e-09,177;CL:0000763,1.07e-07,108;CL:0000049,1.07e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.14e-32!239;DOID:162!5.07e-32!235;DOID:0050686!3.34e-18!137;DOID:2531!4.04e-18!51;DOID:0060083!4.04e-18!51;DOID:0050687!3.89e-17!143;DOID:305!7.79e-17!106;DOID:1240!7.75e-15!39;DOID:8692!2.17e-11!31 | |ontology_enrichment_disease=DOID:14566!1.14e-32!239;DOID:162!5.07e-32!235;DOID:0050686!3.34e-18!137;DOID:2531!4.04e-18!51;DOID:0060083!4.04e-18!51;DOID:0050687!3.89e-17!143;DOID:305!7.79e-17!106;DOID:1240!7.75e-15!39;DOID:8692!2.17e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;7.93e-12;39!DOID:2531;1.36e-11;51!DOID:0060083;1.36e-11;51!DOID:8692;4.25e-11;31 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.14e-32,239;DOID:162,5.07e-32,235;DOID:0050686,3.34e-18,137;DOID:2531,4.04e-18,51;DOID:0060083,4.04e-18,51;DOID:0050687,3.89e-17,143;DOID:305,7.79e-17,106;DOID:1240,7.75e-15,39;DOID:8692,2.17e-11,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@TFRC | |short_description=p1@TFRC | ||
}} | }} |
Latest revision as of 14:57, 17 September 2015
Short description: | p1@TFRC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TFRC_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000392396, ENST00000420415, ENST00000421258, ENST00000464011, ENST00000535031, ENST00000540528, NM_003234, uc003fvz.3_5end |
EntrezGene: | TFRC |
HGNC: | 11763 |
UniProt: | P02786G3V0E5F8WBE5F5H6B1Q7Z3E0A8K6Q8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.43e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.92e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-09 | 161 |
hematopoietic cell | 3.46e-09 | 177 |
myeloid cell | 1.07e-07 | 108 |
common myeloid progenitor | 1.07e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.14e-32 | 239 |
cancer | 5.07e-32 | 235 |
organ system cancer | 3.34e-18 | 137 |
hematologic cancer | 4.04e-18 | 51 |
immune system cancer | 4.04e-18 | 51 |
cell type cancer | 3.89e-17 | 143 |
carcinoma | 7.79e-17 | 106 |
leukemia | 7.75e-15 | 39 |
myeloid leukemia | 2.17e-11 | 31 |