FFCP PHASE1:Hg19::chr8:24151592..24151611,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:24151592..24151611,+ to FFCP PHASE1:Hg19::chr8:24151592..24151611,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10863 | |EntrezGene=10863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=206 | |HGNC=206 | ||
|TSSclassifier=strong | |||
|UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3 | |UniProt=E7EMU1,E5RGY1,E5RJQ1,B4DDY3 | ||
|association_with_transcript=10bp_to_ENST00000397649,ENST00000520448,ENST00000523379,ENST00000540823_5end | |||
|cluster_id=chr8:24151592..24151611,+ | |||
|coexpression_cluster_id=C4745 | |||
|description=CAGE_peak_2_at_ADAM28_5end | |||
|id=chr8:24151592..24151611,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.78e-21!140;CL:0000037!1.28e-20!172;CL:0000566!1.28e-20!172;CL:0002057!3.00e-20!42;CL:0002009!3.88e-19!65;CL:0000763!1.56e-18!112;CL:0000049!1.56e-18!112;CL:0002032!1.72e-18!165;CL:0000837!1.72e-18!165;CL:0002194!8.87e-18!63;CL:0000576!8.87e-18!63;CL:0000040!8.87e-18!63;CL:0000559!8.87e-18!63;CL:0000860!9.51e-18!45;CL:0000766!9.83e-18!76;CL:0000988!2.05e-17!182;CL:0002087!3.87e-17!119;CL:0000557!6.83e-17!71;CL:0000839!1.24e-14!70;CL:0002031!2.17e-14!124;CL:0000236!5.55e-11!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.33e-21;33!CL:0002057;3.33e-21;33!CL:0000473;4.07e-21;39!CL:0000234;4.07e-21;39!CL:0000576;1.24e-14;48!CL:0000236;5.03e-13;13!CL:0000766;9.89e-11;69!CL:0000945;3.86e-08;24!CL:0000738;2.66e-07;136!CL:0000763;2.95e-07;100!CL:0002087;4.90e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.03e-27,48;CL:0000234,8.03e-27,48;CL:0000738,2.73e-26,136;CL:0000037,2.28e-24,168;CL:0002009,1.38e-23,61;CL:0000860,1.49e-22,42;CL:0002057,1.49e-22,42;CL:0000766,1.58e-22,72;CL:0002194,7.73e-22,59;CL:0000576,7.73e-22,59;CL:0000040,7.73e-22,59;CL:0000559,7.73e-22,59;CL:0000988,1.31e-21,177;CL:0002032,1.31e-21,161;CL:0000837,1.31e-21,161;CL:0000763,1.41e-21,108;CL:0000049,1.41e-21,108;CL:0000557,2.47e-21,67;CL:0002087,8.48e-21,115;CL:0000839,7.08e-18,66;CL:0002031,2.01e-17,120;CL:0000236,8.61e-14,14;CL:0000945,4.09e-08,24;CL:0000826,4.09e-08,24 | |||
|ontology_enrichment_development_v019=CL:0002057;7.40e-17;42!CL:0000049;8.90e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.21e-42!115;UBERON:0002390!3.22e-18!102;UBERON:0003061!3.22e-18!102;UBERON:0001049!1.20e-17!57;UBERON:0005068!1.20e-17!57;UBERON:0006241!1.20e-17!57;UBERON:0007135!1.20e-17!57;UBERON:0002193!1.48e-16!112;UBERON:0003080!1.14e-14!42;UBERON:0002780!1.67e-14!41;UBERON:0001890!1.67e-14!41;UBERON:0006240!1.67e-14!41;UBERON:0002616!9.23e-14!59;UBERON:0002371!1.27e-13!80;UBERON:0001017!6.32e-12!82;UBERON:0003075!1.02e-11!86;UBERON:0007284!1.02e-11!86;UBERON:0005743!1.25e-11!86;UBERON:0001474!2.52e-11!86;UBERON:0000955!7.10e-11!69;UBERON:0006238!7.10e-11!69;UBERON:0002020!9.68e-11!34;UBERON:0003528!9.68e-11!34;UBERON:0001893!1.29e-10!34;UBERON:0002346!2.29e-10!90;UBERON:0002791!2.94e-10!33;UBERON:0002405!7.64e-10!115;UBERON:0001869!1.98e-09!32;UBERON:0003056!1.99e-09!61;UBERON:0000073!2.49e-09!94;UBERON:0001016!2.49e-09!94;UBERON:0004765!6.96e-09!101;UBERON:0001434!6.96e-09!101;UBERON:0002619!4.83e-08!22;UBERON:0000153!1.77e-07!129;UBERON:0007811!1.77e-07!129;UBERON:0000033!3.79e-07!123;UBERON:0001950!6.50e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.80e-12;41!UBERON:0001890;6.80e-12;41!UBERON:0000073;3.73e-10;53!UBERON:0002616;3.73e-10;53!UBERON:0003528;8.61e-10;34!UBERON:0002020;8.61e-10;34!UBERON:0001893;8.62e-10;34!UBERON:0002791;3.49e-09;32!UBERON:0007023;3.85e-09;114!UBERON:0001869;6.01e-09;32!UBERON:0002420;7.66e-08;9!UBERON:0000125;7.66e-08;9!UBERON:0007245;7.66e-08;9!UBERON:0002308;7.66e-08;9!UBERON:0010009;7.66e-08;9!UBERON:0010011;7.66e-08;9!UBERON:0000454;7.66e-08;9!UBERON:0002619;8.32e-08;22!UBERON:0000178;1.41e-07;15!UBERON:0000179;1.41e-07;15!UBERON:0000463;1.41e-07;15!UBERON:0001894;5.26e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.40e-37,114;UBERON:0002390,7.40e-24,98;UBERON:0003061,7.40e-24,98;UBERON:0002193,8.58e-22,108;UBERON:0001049,5.01e-19,56;UBERON:0005068,5.01e-19,56;UBERON:0006241,5.01e-19,56;UBERON:0007135,5.01e-19,56;UBERON:0002371,6.13e-18,76;UBERON:0000073,5.26e-17,53;UBERON:0002616,5.26e-17,53;UBERON:0002780,2.74e-16,41;UBERON:0001890,2.74e-16,41;UBERON:0003080,2.74e-16,41;UBERON:0006240,2.74e-16,41;UBERON:0002405,6.11e-16,93;UBERON:0001474,1.95e-15,82;UBERON:0004765,1.70e-14,90;UBERON:0001434,3.61e-12,100;UBERON:0003528,1.20e-11,34;UBERON:0002020,1.20e-11,34;UBERON:0000955,1.28e-11,68;UBERON:0006238,1.28e-11,68;UBERON:0001893,1.69e-11,34;UBERON:0001017,1.83e-11,81;UBERON:0003075,1.53e-10,82;UBERON:0007284,1.53e-10,82;UBERON:0002791,2.49e-10,32;UBERON:0001869,4.65e-10,32;UBERON:0001016,1.50e-09,89;UBERON:0002346,1.84e-09,86;UBERON:0003056,6.50e-09,61;UBERON:0002420,5.89e-08,9;UBERON:0007245,5.89e-08,9;UBERON:0010009,5.89e-08,9;UBERON:0010011,5.89e-08,9;UBERON:0000454,5.89e-08,9;UBERON:0000125,6.17e-08,9;UBERON:0002308,6.17e-08,9;UBERON:0002619,8.90e-08,22;UBERON:0000178,1.37e-07,15;UBERON:0000179,1.37e-07,15;UBERON:0000463,1.37e-07,15;UBERON:0001894,5.98e-07,7;UBERON:0006222,5.98e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,5.75744097145819,4.33485145285013,0.919421224478927,0,0.369754010166788,0,2.13253848731132,7.04641054403633,7.75593571944628,8.22232234627581,4.55722828503289,3.80656306207871,2.59114932815184,5.40908692031792,4.21654892460738,7.17964293008738,4.60909716256851,5.57829688573643,3.70051099219643,1.54853185447552,18.4123131086176,28.1776777182011,23.1752585290814,2.41321976515633,1.93645405075148,1.35426486594342,4.70605848856512,3.82068610080984,4.94391665779186,2.44867113896722,7.38136762275015,3.83602275479425,22.7597397128834,36.1029220295154,27.2783840340924,1.7412554317715,2.8369261234557,1.86846674698672,18.3411525637423,20.8593167368081,22.370451004627,3.02699751316684,8.83866326370155,4.74693581161327,0.845021145247767,1.06302149982522,1.04829322754188,2.13424399178341,1.95229960693958,3.53596290733576,0.285012743741249,0,0.365328307529268,33.4392864476513,38.7758413996113,36.4698794084057,59.742231159311,35.2348468591691,44.2559378764952,42.3068718582312,41.978365199556,55.7828709727259,59.3109561264648,54.2827983937825,13.2171328579026,14.5732226375199,3.95076127162616,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0.221533894583621,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.639933055772092,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,0,0,0,0,0,0.472674085820339,0,0.175669571386252,1.83370705696798,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,1.14398982156026,3.34311751196608,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,3.87780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72746120590835,0.286804595389004,0.243947412259191,0.132529768321485,0.348581828608555,1.14027160516907,0.756962552626885,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,5.17055712783534,3.04205544681009,3.71577905721821,0,22.0056587940506,5.2456785979683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,3.64871341923571,16.072226925828,10.5416969741516,0,0,0,0,0,0,0,1.77327684181734,0,1.02674429023799,0,0,0,0.167516265334349,0,13.4821264310493,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.51132920165282,9.49142483601914,3.09509917629989,0,0,0,0,4.29693525206575,0,0,0,0,0,0,0,0,0,0,0,4.21063587636898,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0.325378394664303,1.33953315142039,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,2.31398881505369,0.192190067365106,1.65896526242959,0.2023155617111,0,0,0,0,0,0,0.74129687641568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32687795048244,3.5076070820301,0,0,0,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0.769776901804097,0.670302275535787,0,1.69458841398202,0.43050537267123,1.68471475667626,0.443430153536676,2.98640420269047,5.58192370155386,5.35246044999663,3.41788312304498,9.05280746739598,9.87269455406866,5.83625980073446,5.40031437238115,4.75875105776562,0,0,0,6.68891430452587,0,0,0,1.79621434289535,7.4687094351623,2.11673582723883,0.324621940274555,1.68478306868075,5.24939761776342,0,0,13.3740504463267,0.642352300414798,0.201799707191048,0,0,0,0,0.166849141711909,0.19538809540204,0,1.23087398947712,0,0,1.4098700508785,1.68426486367398,1.02555725490326,0,1.22587722705226,0,0,0,0,7.95318118213038,5.48610724001,0.222617410045812,0,0,1.19548792950642,12.7090601144328,0,0,0,0,2.15684042753584,0.895105873378046,0,5.03081368748361,4.7896618469388,0,1.93866549219044,2.50473865036998,0,0,0,0.724999575434793,0.227586896570999,2.54253650292766,0,0,0,0,4.42870692906919,3.97968247463846,0,0.995213339381022,0.591095237907095,1.09692698576986,0,0,2.38545801361771,0.341826167541004,0,0,0,0.638002319463839,0.183195186803725,0.533034776018635,0,0,3.32423363800313,0,0,0,0,0,0,2.61172493054636,0,0,2.98578579323551,2.21143911258348,1.22206028986725,0,0,0,9.9753676811402,0.802577647298789,4.45102446878144,7.48064635784231,1.36965233252463,0,1.18375320854817,4.83962864194656,0,12.4477561868121,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,19.7441135113494,0,0,0,0,1.84279131327997,0,1.12990370390266,0,0,3.29216138970569,0,4.96984685559509,10.0322907527496,0,0,0,0,0,0,0.235694034616795,0,0,0,0,4.80336230967832,7.39289046016762,11.4971929260275,0,0,1.11712960508902,0.458320848023367,0,0.399358000997982,0.429226048136571,0.223171457441873,0.53746777989381,0,0,0,0,0,20.768198599612,0,10.3379859675209,5.17572943223987,0.321506296930038,0.275078873194468,0.83088067605837,34.6459792989311,11.6070293183692,3.64497339948148,0,2.20655980437755,0.262272940674991,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0.732761168390412,0,5.55916712354667,7.40502569759064,0.171086837884329,1.40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| ||
|short_description=p2@ADAM28 | |||
}} | }} |
Latest revision as of 15:06, 17 September 2015
Short description: | p2@ADAM28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ADAM28_5end |
Coexpression cluster: | C4745_CD19_CD14_stomach_immature_epididymis_spinal_smallcell |
Association with transcript: | 10bp_to_ENST00000397649, ENST00000520448, ENST00000523379, ENST00000540823_5end |
EntrezGene: | ADAM28 |
HGNC: | 206 |
UniProt: | E7EMU1E5RGY1E5RJQ1B4DDY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 8.03e-27 | 48 |
phagocyte | 8.03e-27 | 48 |
leukocyte | 2.73e-26 | 136 |
hematopoietic stem cell | 2.28e-24 | 168 |
macrophage dendritic cell progenitor | 1.38e-23 | 61 |
classical monocyte | 1.49e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.49e-22 | 42 |
myeloid leukocyte | 1.58e-22 | 72 |
monopoietic cell | 7.73e-22 | 59 |
monocyte | 7.73e-22 | 59 |
monoblast | 7.73e-22 | 59 |
promonocyte | 7.73e-22 | 59 |
hematopoietic cell | 1.31e-21 | 177 |
hematopoietic oligopotent progenitor cell | 1.31e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-21 | 161 |
myeloid cell | 1.41e-21 | 108 |
common myeloid progenitor | 1.41e-21 | 108 |
granulocyte monocyte progenitor cell | 2.47e-21 | 67 |
nongranular leukocyte | 8.48e-21 | 115 |
myeloid lineage restricted progenitor cell | 7.08e-18 | 66 |
hematopoietic lineage restricted progenitor cell | 2.01e-17 | 120 |
B cell | 8.61e-14 | 14 |
lymphocyte of B lineage | 4.09e-08 | 24 |
pro-B cell | 4.09e-08 | 24 |