FFCP PHASE1:Hg19::chr12:15942309..15942330,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2059 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3420 | |||
|TSSclassifier=strong | |||
|UniProt=F5H2B8,F5H1B5 | |||
|association_with_transcript=0bp_to_ENST00000536793,ENST00000543523,ENST00000544064_5end | |||
|cluster_id=chr12:15942309..15942330,- | |||
|description=CAGE_peak_1_at_EPS8_5end | |||
|id=chr12:15942309..15942330,- | |||
|ontology_enrichment_celltype=CL:0000055!9.98e-24!180;CL:0000057!2.79e-17!75;CL:0002620!2.87e-09!23;CL:0000136!1.75e-08!15 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.93e-09;23!CL:0000136;1.26e-07;13!CL:0000057;3.13e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.97e-17,76;CL:0002620,2.84e-09,23;CL:0000136,1.73e-08,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.48e-19!365;UBERON:0000481!1.54e-12!347;UBERON:0002100!4.82e-11!216;UBERON:0000468!2.65e-10!659;UBERON:0005256!9.01e-09!143;UBERON:0000119!5.25e-08!312;UBERON:0000914!7.41e-08!83;UBERON:0002329!7.41e-08!83;UBERON:0003077!7.41e-08!83;UBERON:0003059!7.41e-08!83;UBERON:0007282!7.41e-08!83;UBERON:0009618!7.41e-08!83;UBERON:0007285!7.41e-08!83;UBERON:0000483!2.95e-07!309;UBERON:0000467!3.01e-07!625;UBERON:0000062!3.12e-07!511;UBERON:0004290!3.73e-07!70;UBERON:0000480!4.64e-07!626;UBERON:0003104!8.59e-07!238;UBERON:0009142!8.59e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.09e-09,160;UBERON:0009142,1.09e-09,160;UBERON:0002100,2.48e-09,199;UBERON:0005256,1.10e-08,122;UBERON:0000119,1.28e-07,309;UBERON:0002329,2.28e-07,71;UBERON:0003059,2.28e-07,71;UBERON:0007282,2.28e-07,71;UBERON:0004290,2.28e-07,71;UBERON:0009618,2.28e-07,71;UBERON:0003077,2.41e-07,72;UBERON:0007285,2.41e-07,72;UBERON:0007524,4.42e-07,73;UBERON:0010314,6.22e-07,132;UBERON:0000483,6.83e-07,306;UBERON:0002199,9.61e-07,46;UBERON:0002416,9.61e-07,46 | |||
|phase1_expression=167.507465687453,101.483648324326,131.369504617445,97.0710994025365,105.929779379267,81.9998212654347,50.6599756336621,125.080534938513,55.1101675501659,3.93174298402414,2.79120467188971,3.05817920982241,1.84636884759917,146.044296492855,141.50667943582,10.0848771967766,14.4646686725754,12.4152715365853,10.2465887746006,35.3357436680381,44.0641493087586,14.418917187992,40.359274185479,58.0347562309029,58.7539553303677,36.8312615705125,33.5791410850278,33.609503620941,5.90046415273356,2.68680578668049,5.57338043937874,3.67768489791571,1.204823675113,14.0506523863379,0,0,0.587200878669695,5.53995408531877,6.21687787157439,1.08505435357926,20.3763081558331,2.91504299417082,13.6515050846119,4.21654892460738,7.17964293008738,4.36651310138069,7.67015821788759,10.2791972005456,8.981484755958,6.04154023876516,9.99026755463492,11.5876292645407,4.82643953031266,7.74581620300591,6.77132432971709,4.1413314699373,3.82068610080984,6.29225756446237,2.75475503133812,8.02322567690234,8.95071976118658,5.60747210317417,6.58230070151385,8.52449501065388,2.61188314765726,7.94339314567596,4.35975574296902,11.3061899365534,14.6015217157656,12.8141418376019,9.6863920421339,5.52416453981347,4.74693581161327,24.5056132121852,24.44949449598,9.43463904787692,2.92054440980887,3.90459921387916,4.17886525412408,35.6265929676561,55.099919584148,39.2727930593963,5.27988733383968,1.09227722252426,0.889509253863555,0.853460445133014,1.20118796110804,1.72425731986345,1.32208974556972,0,5.69212969109448,3.52342313622563,4.58727873750275,2.64342657158052,6.72610275577843,1.58030450865046,2.9506465517075,3.53709686474248,1.64481199199607,0.167186495390678,4.23698946623668,2.36723902867367,5.84480185223734,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0.289803085735052,3.11401782640327,4.28065324943541,6.27213142829861,0.226618685395132,0.766440987203842,1.71813722741315,0.759059076058509,1.91139248594458,0,0,1.6563263098555,1.4078527226986,1.24930726552346,1.89421801635213,0,2.62088766192152,1.60464117470104,1.44824403882799,121.903433156981,52.3146670568836,82.5992149509206,114.576211305908,147.393345726952,75.1753433406675,77.1427368639566,59.8560890472242,55.3974028581438,29.0465510675959,38.3838013478961,38.5733377340764,1.45718115317017,2.22470665670658,22.0692227685185,29.6020553408754,14.2265017755186,0.715471872916026,0,1.48583000531826,14.1121309230361,24.9468032580776,13.5384795626962,38.4409400508327,13.423981958717,5.77747888074142,15.6746224902608,3.87625138753993,12.4518191940349,8.03329470635209,6.44526907374635,3.80136052859256,0.732186172644509,8.45625084795498,0.81014194788176,11.16246603551,11.2264686313085,20.1574550065147,1.53316637465883,10.4419222552494,4.21364011039937,1.31780417436063,3.87780264148325,3.48875241714027,121.261156213658,52.425031829136,39.1931175207128,101.253327124331,65.2589823244977,64.4779240163653,10.6748995729705,12.5800449692752,250.524883496812,111.540436473702,122.923351141321,230.366004875586,348.010258385919,51.5507150034353,60.8712149819125,59.3290694406227,81.5989795812834,100.171627343131,111.206712780906,110.53478487467,121.471731896661,40.1668217609481,110.661911639245,61.7761485786668,59.8385968854108,57.3401658020957,36.6495252326282,46.2924313373682,61.9336673366223,123.570595505946,54.8722026101047,37.3915110874804,83.3821226931612,81.7846040583752,56.8665145133692,70.9010530877644,112.323907614568,54.9166705834456,61.8315175430633,127.532067322586,109.064477810312,78.9873234889126,102.698603439903,74.2155296277697,72.5353201301319,80.9846744662248,55.7365060251085,51.3835700960965,86.6454626706592,5.21804303540901,2.45471508531751,4.58887352622406,1.95157929807353,1.85541675650079,2.78865462886844,6.11600224590686,2.77552935963191,1.45990943630332,7.8224766164908,26.3728784659083,27.6269842704961,129.558651920922,80.8505019469936,6.03364680203204,7.08055698328027,7.47134192638794,5.95587452754927,3.92182999366331,4.98268300133303,6.87639671616838,6.67152981426177,5.77120735419586,3.69077727312324,18.231430594448,44.0384192124598,39.6923520740963,21.5483559197112,28.5019892836512,53.1710916013264,0,15.3735548178892,36.2008079729889,2.41450627898976,5.62008766288098,1.10581869652794,1.75918045801206,28.3453225619982,30.1581087731078,21.649701303791,22.8382897800901,44.1456690326689,4.04226053731007,1.38895653772983,3.23432058798817,11.0628615714299,18.0282094039923,8.8638122191463,13.806251643215,7.72882043901387,3.74935335947108,9.57498130733499,4.39502801451398,37.8832551033048,29.9352956669381,8.05103626246943,0.985326475791887,0.088048434013226,4.14656231081544,2.30591925467138,1.00993946741104,78.1024099793679,77.5436503883304,71.5026427981287,41.0573870454493,74.3442772245029,60.6692976844713,97.7526399596577,162.141547963392,104.194456451154,223.90178661136,35.5497218333889,103.720369297046,55.789981668696,123.661224211965,128.969221770094,56.071207589147,49.6471962081474,43.6932373586403,256.5025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| |||
|short_description=p1@EPS8 | |||
}} |
Latest revision as of 15:12, 17 September 2015
Short description: | p1@EPS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EPS8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000536793, ENST00000543523, ENST00000544064_5end |
EntrezGene: | EPS8 |
HGNC: | 3420 |
UniProt: | F5H2B8F5H1B5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.97e-17 | 76 |
skin fibroblast | 2.84e-09 | 23 |
fat cell | 1.73e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.09e-09 | 160 |
entire embryonic mesenchyme | 1.09e-09 | 160 |
trunk | 2.48e-09 | 199 |
trunk mesenchyme | 1.10e-08 | 122 |
cell layer | 1.28e-07 | 309 |
somite | 2.28e-07 | 71 |
presomitic mesoderm | 2.28e-07 | 71 |
presumptive segmental plate | 2.28e-07 | 71 |
dermomyotome | 2.28e-07 | 71 |
trunk paraxial mesoderm | 2.28e-07 | 71 |
paraxial mesoderm | 2.41e-07 | 72 |
presumptive paraxial mesoderm | 2.41e-07 | 72 |
dense mesenchyme tissue | 4.42e-07 | 73 |
structure with developmental contribution from neural crest | 6.22e-07 | 132 |
epithelium | 6.83e-07 | 306 |
integument | 9.61e-07 | 46 |
integumental system | 9.61e-07 | 46 |