FFCP PHASE1:Hg19::chr19:36632056..36632092,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=826 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1481 | |||
|TSSclassifier=strong | |||
|UniProt=P04632 | |||
|association_with_transcript=142bp_to_BT009775_5end | |||
|cluster_id=chr19:36632056..36632092,+ | |||
|description=CAGE_peak_5_at_CAPNS1_5end | |||
|id=chr19:36632056..36632092,+ | |||
|ontology_enrichment_celltype=CL:0002371!5.38e-17!591;CL:0000144!1.39e-15!625;CL:0000548!6.30e-14!679;CL:0000004!6.30e-14!679;CL:0000255!6.30e-14!679;CL:0000012!6.17e-13!682;CL:0000222!4.55e-12!119;CL:0000055!3.19e-09!180;CL:0000183!5.25e-09!59;CL:0000680!1.67e-08!57;CL:0000056!1.67e-08!57;CL:0000355!1.67e-08!57;CL:0000003!1.92e-08!722;CL:0000723!2.12e-08!436;CL:0000220!3.82e-08!246;CL:0000048!3.83e-08!430;CL:0000192!4.56e-08!42;CL:0000514!4.56e-08!42;CL:0002321!5.14e-08!248;CL:0000187!5.94e-08!54;CL:0000393!3.43e-07!60;CL:0000211!3.43e-07!60;CL:0000034!3.49e-07!444 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.08e-13,121;CL:0000680,5.48e-09,58;CL:0000056,5.48e-09,58;CL:0000355,5.48e-09,58;CL:0002321,1.00e-08,250;CL:0000723,1.23e-08,433;CL:0000192,1.48e-08,43;CL:0000514,1.48e-08,43;CL:0000048,1.82e-08,427;CL:0000187,2.05e-08,55;CL:0000034,1.45e-07,441;CL:0000393,2.07e-07,61;CL:0000211,2.07e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.66e-12!216;UBERON:0000926!2.73e-11!448;UBERON:0004120!2.73e-11!448;UBERON:0006603!2.73e-11!448;UBERON:0002049!3.54e-09!79;UBERON:0007798!3.54e-09!79;UBERON:0000914!3.68e-09!83;UBERON:0002329!3.68e-09!83;UBERON:0003077!3.68e-09!83;UBERON:0003059!3.68e-09!83;UBERON:0007282!3.68e-09!83;UBERON:0009618!3.68e-09!83;UBERON:0007285!3.68e-09!83;UBERON:0004872!5.27e-09!84;UBERON:0001009!8.66e-09!113;UBERON:0004290!1.42e-08!70;UBERON:0002204!1.66e-08!167;UBERON:0004535!1.90e-08!110;UBERON:0000055!2.12e-08!69;UBERON:0000468!3.49e-08!659;UBERON:0000486!7.05e-08!82;UBERON:0001134!8.24e-08!61;UBERON:0002036!8.24e-08!61;UBERON:0003082!8.24e-08!61;UBERON:0002385!2.71e-07!63;UBERON:0001015!2.71e-07!63;UBERON:0000383!2.71e-07!63;UBERON:0001981!3.94e-07!60;UBERON:0007500!3.94e-07!60;UBERON:0004537!3.94e-07!60;UBERON:0006965!3.94e-07!60;UBERON:0000467!5.80e-07!625;UBERON:0001637!5.95e-07!42;UBERON:0003509!5.95e-07!42;UBERON:0004572!5.95e-07!42;UBERON:0005256!7.35e-07!143;UBERON:0000480!8.36e-07!626 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.67e-18,315;UBERON:0004120,2.67e-18,315;UBERON:0006603,2.67e-18,315;UBERON:0003081,3.67e-11,203;UBERON:0007503,5.63e-11,78;UBERON:0002049,5.68e-10,78;UBERON:0007798,5.68e-10,78;UBERON:0002204,1.60e-09,167;UBERON:0002329,2.38e-09,71;UBERON:0003059,2.38e-09,71;UBERON:0007282,2.38e-09,71;UBERON:0004290,2.38e-09,71;UBERON:0009618,2.38e-09,71;UBERON:0004872,2.40e-09,83;UBERON:0007524,2.55e-09,73;UBERON:0000055,3.83e-09,68;UBERON:0001009,3.85e-09,112;UBERON:0003077,7.01e-09,72;UBERON:0007285,7.01e-09,72;UBERON:0004535,8.73e-09,109;UBERON:0000486,1.84e-08,83;UBERON:0001134,2.07e-08,62;UBERON:0002036,2.07e-08,62;UBERON:0003082,2.07e-08,62;UBERON:0002385,6.59e-08,64;UBERON:0001015,6.59e-08,64;UBERON:0000383,6.59e-08,64;UBERON:0007500,7.64e-08,59;UBERON:0001981,7.64e-08,59;UBERON:0004537,7.64e-08,59;UBERON:0006965,7.64e-08,59;UBERON:0001637,2.02e-07,42;UBERON:0003509,2.02e-07,42;UBERON:0004572,2.02e-07,42 | |||
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| |||
|short_description=p5@CAPNS1 | |||
}} |
Latest revision as of 15:51, 17 September 2015
Short description: | p5@CAPNS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CAPNS1_5end |
Coexpression cluster: | NA |
Association with transcript: | 142bp_to_BT009775_5end |
EntrezGene: | CAPNS1 |
HGNC: | 1481 |
UniProt: | P04632 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.08e-13 | 121 |
muscle precursor cell | 5.48e-09 | 58 |
myoblast | 5.48e-09 | 58 |
multi-potent skeletal muscle stem cell | 5.48e-09 | 58 |
embryonic cell | 1.00e-08 | 250 |
somatic stem cell | 1.23e-08 | 433 |
smooth muscle cell | 1.48e-08 | 43 |
smooth muscle myoblast | 1.48e-08 | 43 |
multi fate stem cell | 1.82e-08 | 427 |
muscle cell | 2.05e-08 | 55 |
stem cell | 1.45e-07 | 441 |
electrically responsive cell | 2.07e-07 | 61 |
electrically active cell | 2.07e-07 | 61 |