FFCP PHASE1:Hg19::chr20:657088..657101,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85508 | |EntrezGene=85508 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15952 | |HGNC=15952 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NQ03 | |UniProt=Q9NQ03 | ||
|association_with_transcript=-263bp_to_ENST00000246104_5end | |association_with_transcript=-263bp_to_ENST00000246104_5end | ||
|cluster_id=chr20:657088..657101,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_SCRT2_5end | |description=CAGE_peak_6_at_SCRT2_5end | ||
|id=chr20:657088..657101,- | |id=chr20:657088..657101,- | ||
|ontology_enrichment_celltype=CL:0000540!9.77e-12!6;CL:0000031!9.77e-12!6;CL:0000404!9.77e-12!6;CL:0000047!6.39e-09!8 | |ontology_enrichment_celltype=CL:0000540!9.77e-12!6;CL:0000031!9.77e-12!6;CL:0000404!9.77e-12!6;CL:0000047!6.39e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000540;2.85e-14;6!CL:0000404;2.85e-14;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.85e-14,6;CL:0000031,2.85e-14,6;CL:0000404,2.85e-14,6;CL:0000047,5.98e-11,8 | |||
|ontology_enrichment_development_v019=CL:0000031;2.85e-14;6 | |||
|ontology_enrichment_disease=DOID:169!2.15e-11!6;DOID:2355!1.10e-08!1;DOID:171!5.05e-07!10 | |ontology_enrichment_disease=DOID:169!2.15e-11!6;DOID:2355!1.10e-08!1;DOID:171!5.05e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:2355;6.31e-21;1!DOID:74;3.70e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,9.43e-21,1;DOID:74,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.44e-13!5;UBERON:0002410!1.44e-13!5;UBERON:0000073!3.40e-10!94;UBERON:0001016!3.40e-10!94;UBERON:0002106!3.64e-10!3;UBERON:0004854!3.64e-10!3;UBERON:0009034!3.64e-10!3;UBERON:0002095!3.64e-10!3;UBERON:0004782!3.64e-10!3;UBERON:0003281!3.64e-10!3;UBERON:0009664!3.64e-10!3;UBERON:0002296!3.64e-10!3;UBERON:0005602!3.64e-10!3;UBERON:0001179!3.64e-10!3;UBERON:0006293!3.64e-10!3;UBERON:0004177!2.14e-09!7;UBERON:0000010!9.36e-08!8 | |ontology_enrichment_uberon=UBERON:0000013!1.44e-13!5;UBERON:0002410!1.44e-13!5;UBERON:0000073!3.40e-10!94;UBERON:0001016!3.40e-10!94;UBERON:0002106!3.64e-10!3;UBERON:0004854!3.64e-10!3;UBERON:0009034!3.64e-10!3;UBERON:0002095!3.64e-10!3;UBERON:0004782!3.64e-10!3;UBERON:0003281!3.64e-10!3;UBERON:0009664!3.64e-10!3;UBERON:0002296!3.64e-10!3;UBERON:0005602!3.64e-10!3;UBERON:0001179!3.64e-10!3;UBERON:0006293!3.64e-10!3;UBERON:0004177!2.14e-09!7;UBERON:0000010!9.36e-08!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.25e-11;49!UBERON:0001950;3.17e-09;20!UBERON:0002619;1.79e-08;22!UBERON:0002114;5.18e-08;2!UBERON:0000956;1.46e-07;25!UBERON:0000203;1.46e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.31e-10,89;UBERON:0001950,3.26e-09,20;UBERON:0001017,1.44e-08,81;UBERON:0002619,1.83e-08,22;UBERON:0002114,5.18e-08,2;UBERON:0000956,1.49e-07,25;UBERON:0000203,1.49e-07,25 | |||
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|short_description=p6@SCRT2 | |short_description=p6@SCRT2 | ||
}} | }} |
Latest revision as of 15:54, 17 September 2015
Short description: | p6@SCRT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCRT2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -263bp_to_ENST00000246104_5end |
EntrezGene: | SCRT2 |
HGNC: | 15952 |
UniProt: | Q9NQ03 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.85e-14 | 6 |
neuroblast | 2.85e-14 | 6 |
electrically signaling cell | 2.85e-14 | 6 |
neuronal stem cell | 5.98e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.31e-10 | 89 |
neocortex | 3.26e-09 | 20 |
central nervous system | 1.44e-08 | 81 |
regional part of cerebral cortex | 1.83e-08 | 22 |
duodenum | 5.18e-08 | 2 |
cerebral cortex | 1.49e-07 | 25 |
pallium | 1.49e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
anemia | 9.43e-21 | 1 |
hematopoietic system disease | 4.52e-11 | 2 |