FFCP PHASE1:Hg19::chr6:30293753..30293788,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56658 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10065 | |||
|TSSclassifier=strong | |||
|UniProt=A2AAZ5 | |||
|association_with_transcript=-467bp_to_ENST00000458516,uc003npz.2_5end | |||
|cluster_id=chr6:30293753..30293788,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_5_at_TRIM39_5end | |||
|id=chr6:30293753..30293788,+ | |||
|ontology_enrichment_celltype=CL:0000838!2.39e-21!52;CL:0000542!1.54e-20!53;CL:0000051!1.54e-20!53;CL:0000084!2.03e-15!25;CL:0000827!2.03e-15!25;CL:0000791!1.53e-14!18;CL:0000789!1.53e-14!18;CL:0002420!1.53e-14!18;CL:0002419!1.53e-14!18;CL:0000790!1.53e-14!18;CL:0000738!3.41e-10!140;CL:0000625!1.59e-09!11;CL:0002087!1.61e-08!119;CL:0000037!4.82e-07!172;CL:0000566!4.82e-07!172;CL:0002031!5.05e-07!124;CL:0000988!8.21e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.23e-35;18!CL:0000789;1.23e-35;18!CL:0002419;1.23e-35;18!CL:0000084;7.13e-30;25!CL:0000625;1.64e-22;11!CL:0000542;3.87e-17;53!CL:0000624;4.04e-13;6!CL:0000094;4.75e-10;8!CL:0000081;2.92e-09;11!CL:0000623;2.21e-08;3!CL:0000767;7.27e-08;3!CL:0000226;7.51e-08;3!CL:0000842;7.51e-08;3!CL:0002087;1.16e-07;104!CL:0000898;5.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.70e-36,18;CL:0000789,5.70e-36,18;CL:0002420,5.70e-36,18;CL:0002419,5.70e-36,18;CL:0000790,5.70e-36,18;CL:0000838,1.96e-34,52;CL:0000542,1.35e-33,53;CL:0000051,1.35e-33,53;CL:0000084,8.40e-30,25;CL:0000827,8.40e-30,25;CL:0000738,3.61e-25,136;CL:0000625,1.25e-22,11;CL:0002087,3.94e-20,115;CL:0000988,6.42e-20,177;CL:0000037,1.05e-19,168;CL:0002032,1.04e-17,161;CL:0000837,1.04e-17,161;CL:0002031,1.74e-17,120;CL:0000624,3.23e-13,6;CL:0000094,3.68e-10,8;CL:0000081,2.54e-09,11;CL:0000623,2.24e-08,3;CL:0000825,2.24e-08,3;CL:0000226,7.20e-08,3;CL:0000842,7.20e-08,3;CL:0000767,7.36e-08,3;CL:0000898,4.86e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;1.23e-35;18!CL:0000051;3.87e-17;53 | |||
|ontology_enrichment_disease=DOID:162!1.84e-10!235;DOID:14566!2.19e-10!239;DOID:305!1.24e-09!106;DOID:0050687!1.24e-08!143;DOID:1749!8.57e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,2.67446920117829,2.13461532569859,4.171671409625,6.29382842958246,10.747223146722,2.63187409637329,0,0.90361775633475,0.369754010166788,0.852139206383318,0.426507697462265,0,1.66198622559563,2.80762226458198,4.34021741431704,0,0.647787332037959,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0.376484679085209,0.272906150057846,0.224723484445085,1.22433556948361,0,1.27867425159808,0,0,0,0.580418477257168,0.56738522469114,0,0.251248665256743,0,0.217188844705117,0,1.10483290796269,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0.574752439954483,1.32208974556972,0.954053754535364,1.70763890732835,3.52342313622563,1.91136614062614,0,1.12101712596307,0.526768169550154,2.9506465517075,5.10913991573914,7.81285696198135,0.334372990781356,1.62961133316795,0.946895611469467,1.94826728407911,0.891283655081389,1.17842362989935,0.886135578334485,1.35401931882508,0.512365278902701,0.520237390239513,0,0,0,1.18629250529648,0,1.04535523804977,1.0197840842781,7.66440987203842,5.49803912772208,13.1570239850141,2.22995790026868,1.30216690771284,4.75226022224187,1.05402583354441,1.53583933385302,3.74792179657038,1.89421801635213,2.46338399076314,19.555854092799,21.6626558584641,13.0341963494519,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.392937226493138,1.09288586487763,1.11235332835329,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,11.6334079244498,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0.213557388818567,0,0,0,0,0,0,0.194874010322397,0,0,0,0.355009592516614,0,0,0.57978255948989,0,0,1.09776335516636,0.795178609928912,0.69716365721711,0.725627385107593,1.26160425437814,0.72995471815166,0,0,1.38134921352481,0,0,0,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0.882926198829301,0.491953754172454,0,0.439001141634502,0,0.402115889646523,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17587489739202,0.283550194484773,0.268675568108545,0.581267877027924,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,0,0,0,1.56919201590938,25.4169680660486,22.4252677853898,16.299565607528,0,0,0,0,0,0,0,1.65766205374414,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,3.72182447021197,3.8828556147351,11.0996660115582,0.303127571446259,0,1.20956117331872,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.200506470303285,0.828728900423067,0.114814448164607,0,0,0,0.385076685522074,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0.976135183992909,0.309123034943167,0.0915694648183434,0,0.574265537996172,1.95018073810956,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.267096106940212,0.165284915360978,0.576570202095319,1.02090169995667,0.4046311234222,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0,0.655894752046633,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0.211107635297664,0,0,0.349934720244983,0.288666338176536,1.34060455107157,0,0,0,0,0,0.229723400206959,0.507447609232169,0.764637207142375,1.13929437434833,0.714695326373367,0.822724546172388,0,1.08006287447623,0.79312517629427,0.961416640147258,0,0.245040215981032,0,0.432807638929335,0.355709216742071,0.159426272728822,0.399158742865633,0,0,0,0,0,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0,0.111308705022906,0.16480387422676,0.63337622438398,0,0.276283915531148,2.26739473068848,0,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0.435753854075961,0.278847488557207,0.0769502585037971,0.113942055847001,0.46112780877612,0.179515288819544,0,0,0.0915975934018623,0,1.02193298195737,0,0,0.225595660617181,0.784250137270958,1.00692952185506,0,0,0.843992258112108,0.816164040795739,0.989471500037586,0.432777279484182,0,0,0,1.18608451472249,1.11207545051853,0.313265848516366,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0.485560759068186,0,0,0,0.189559738885464,8.86908174545506,0.622129148383483,0.664653872707185,0.330991955875499,0,0,1.70765727617876,0,0.347119476670262,0.979923974143776,0.957651272384428,0.52418000472609,1.0319161948297,0.0967563312890851,0.292357268344742,0,0.0969890164884194,2.91245218081951,0,0.274083849293502,0.19871461170299,0.0633107959558787,0,0,0,0,1.44090417154106,0.114536596165916,0,1.1524383839052,0.621262677827163,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,1.051549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| |||
|short_description=p5@TRIM39 | |||
}} |
Latest revision as of 16:16, 17 September 2015
Short description: | p5@TRIM39 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRIM39_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -467bp_to_ENST00000458516, uc003npz.2_5end |
EntrezGene: | TRIM39 |
HGNC: | 10065 |
UniProt: | A2AAZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.70e-36 | 18 |
alpha-beta T cell | 5.70e-36 | 18 |
immature T cell | 5.70e-36 | 18 |
mature T cell | 5.70e-36 | 18 |
immature alpha-beta T cell | 5.70e-36 | 18 |
lymphoid lineage restricted progenitor cell | 1.96e-34 | 52 |
lymphocyte | 1.35e-33 | 53 |
common lymphoid progenitor | 1.35e-33 | 53 |
T cell | 8.40e-30 | 25 |
pro-T cell | 8.40e-30 | 25 |
leukocyte | 3.61e-25 | 136 |
CD8-positive, alpha-beta T cell | 1.25e-22 | 11 |
nongranular leukocyte | 3.94e-20 | 115 |
hematopoietic cell | 6.42e-20 | 177 |
hematopoietic stem cell | 1.05e-19 | 168 |
hematopoietic oligopotent progenitor cell | 1.04e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.04e-17 | 161 |
hematopoietic lineage restricted progenitor cell | 1.74e-17 | 120 |
CD4-positive, alpha-beta T cell | 3.23e-13 | 6 |
granulocyte | 3.68e-10 | 8 |
blood cell | 2.54e-09 | 11 |
natural killer cell | 2.24e-08 | 3 |
pro-NK cell | 2.24e-08 | 3 |
single nucleate cell | 7.20e-08 | 3 |
mononuclear cell | 7.20e-08 | 3 |
basophil | 7.36e-08 | 3 |
naive T cell | 4.86e-07 | 3 |