FFCP PHASE1:Hg19::chr15:43531963..43531975,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9333 | |EntrezGene=9333 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11781 | |HGNC=11781 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-22bp_to_uc001zrc.1_5end | |association_with_transcript=-22bp_to_uc001zrc.1_5end | ||
|cluster_id=chr15:43531963..43531975,- | |||
|coexpression_cluster_id=C3489 | |||
|description=CAGE_peak_4_at_TGM5_5end | |description=CAGE_peak_4_at_TGM5_5end | ||
|id=chr15:43531963..43531975,- | |id=chr15:43531963..43531975,- | ||
|ontology_enrichment_celltype=CL:0002032!2.55e-21!165;CL:0000837!2.55e-21!165;CL:0000037!3.39e-20!172;CL:0000566!3.39e-20!172;CL:0000763!7.60e-19!112;CL:0000049!7.60e-19!112;CL:0000988!9.68e-19!182;CL:0000219!7.83e-09!390;CL:0000134!7.95e-08!358;CL:0002320!1.51e-07!365;CL:0000128!5.04e-07!7;CL:0000126!5.04e-07!7;CL:0000127!5.04e-07!7;CL:0002453!5.04e-07!7 | |ontology_enrichment_celltype=CL:0002032!2.55e-21!165;CL:0000837!2.55e-21!165;CL:0000037!3.39e-20!172;CL:0000566!3.39e-20!172;CL:0000763!7.60e-19!112;CL:0000049!7.60e-19!112;CL:0000988!9.68e-19!182;CL:0000219!7.83e-09!390;CL:0000134!7.95e-08!358;CL:0002320!1.51e-07!365;CL:0000128!5.04e-07!7;CL:0000126!5.04e-07!7;CL:0000127!5.04e-07!7;CL:0002453!5.04e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0000763;5.01e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.56e-13,108;CL:0000049,1.56e-13,108;CL:0002032,2.18e-12,161;CL:0000837,2.18e-12,161;CL:0000037,8.21e-12,168;CL:0000988,3.89e-11,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.55e-50!31;DOID:1240!3.13e-48!39;DOID:2531!1.05e-39!51;DOID:0060083!1.05e-39!51;DOID:0050686!1.66e-14!137;DOID:162!5.54e-08!235;DOID:14566!1.04e-07!239 | |ontology_enrichment_disease=DOID:8692!3.55e-50!31;DOID:1240!3.13e-48!39;DOID:2531!1.05e-39!51;DOID:0060083!1.05e-39!51;DOID:0050686!1.66e-14!137;DOID:162!5.54e-08!235;DOID:14566!1.04e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.07e-38;31!DOID:1240;6.88e-25;39!DOID:225;1.84e-14;1!DOID:2531;2.17e-14;51!DOID:0060083;2.17e-14;51!DOID:74;7.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.26e-41,31;DOID:1240,6.72e-33,39;DOID:2531,6.26e-25,51;DOID:0060083,6.26e-25,51;DOID:225,1.61e-14,1;DOID:0050686,2.18e-10,137;DOID:74,6.58e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.60e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0,1.06978768047132,1.14940825229924,0.944529375764151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,4.0216127727797,1.05836791361941,0.324621940274555,0.280797178113459,0,0.47003968731907,2.50634477090067,0,6.74469915435538,2.62339619348362,2.12923118845163,0.343505344755765,0,1.11838053946208,0.333698283423817,1.36771666781428,0.556812347790485,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,1.32949287252801,0.123084805461069,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.410623275218653,0,1.06978768047132,1.14940825229924,0.944529375764151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94130590316755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798317485731266,4.0216127727797,1.05836791361941,0.324621940274555,0.280797178113459,0,0.47003968731907,2.50634477090067,0,6.74469915435538,2.62339619348362,2.12923118845163,0.343505344755765,0,1.11838053946208,0.333698283423817,1.36771666781428,0.556812347790485,0,0,0.33307196799782,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0.659215496907038,0,0,0,0,1.32949287252801,0.123084805461069,0,0,0,1.53471711068062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,1.28030075632969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@TGM5 | |short_description=p4@TGM5 | ||
}} | }} |
Latest revision as of 17:09, 17 September 2015
Short description: | p4@TGM5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TGM5_5end |
Coexpression cluster: | C3489_acute_Mast_astrocytoma_biphenotypic_myelodysplastic_chronic_B |
Association with transcript: | -22bp_to_uc001zrc.1_5end |
EntrezGene: | TGM5 |
HGNC: | 11781 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.56e-13 | 108 |
common myeloid progenitor | 1.56e-13 | 108 |
hematopoietic oligopotent progenitor cell | 2.18e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.18e-12 | 161 |
hematopoietic stem cell | 8.21e-12 | 168 |
hematopoietic cell | 3.89e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.26e-41 | 31 |
leukemia | 6.72e-33 | 39 |
hematologic cancer | 6.26e-25 | 51 |
immune system cancer | 6.26e-25 | 51 |
syndrome | 1.61e-14 | 1 |
organ system cancer | 2.18e-10 | 137 |
hematopoietic system disease | 6.58e-08 | 2 |