FFCP PHASE1:Hg19::chr11:33913475..33913549,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4005 | |EntrezGene=4005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6642 | |HGNC=6642 | ||
|TSSclassifier=strong | |||
|UniProt=P25791 | |UniProt=P25791 | ||
|association_with_transcript=286bp_to_ENST00000257818,NM_005574,uc010rem.1_5end | |association_with_transcript=286bp_to_ENST00000257818,NM_005574,uc010rem.1_5end | ||
|cluster_id=chr11:33913475..33913549,- | |||
|coexpression_cluster_id=C3146 | |||
|description=CAGE_peak_5_at_LMO2_5end | |description=CAGE_peak_5_at_LMO2_5end | ||
|id=chr11:33913475..33913549,- | |id=chr11:33913475..33913549,- | ||
|ontology_enrichment_celltype=CL:0000763!4.88e-33!112;CL:0000049!4.88e-33!112;CL:0000037!1.36e-24!172;CL:0000566!1.36e-24!172;CL:0002032!4.46e-23!165;CL:0000837!4.46e-23!165;CL:0000988!2.87e-22!182;CL:0000839!4.78e-08!70;CL:0000766!1.19e-07!76;CL:0002194!1.23e-07!63;CL:0000576!1.23e-07!63;CL:0000040!1.23e-07!63;CL:0000559!1.23e-07!63;CL:0002009!3.05e-07!65;CL:0000557!4.76e-07!71;CL:0002393!8.17e-07!9;CL:0002397!8.17e-07!9 | |ontology_enrichment_celltype=CL:0000763!4.88e-33!112;CL:0000049!4.88e-33!112;CL:0000037!1.36e-24!172;CL:0000566!1.36e-24!172;CL:0002032!4.46e-23!165;CL:0000837!4.46e-23!165;CL:0000988!2.87e-22!182;CL:0000839!4.78e-08!70;CL:0000766!1.19e-07!76;CL:0002194!1.23e-07!63;CL:0000576!1.23e-07!63;CL:0000040!1.23e-07!63;CL:0000559!1.23e-07!63;CL:0002009!3.05e-07!65;CL:0000557!4.76e-07!71;CL:0002393!8.17e-07!9;CL:0002397!8.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000763;2.21e-17;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,9.60e-41,108;CL:0000049,9.60e-41,108;CL:0000037,2.10e-25,168;CL:0002032,5.92e-25,161;CL:0000837,5.92e-25,161;CL:0000988,9.89e-24,177;CL:0000134,4.31e-08,354;CL:0002320,8.64e-08,361;CL:0000219,2.11e-07,386;CL:0000034,6.85e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000049;6.10e-15;108 | |||
|ontology_enrichment_disease=DOID:8692!9.05e-46!31;DOID:1240!2.35e-34!39;DOID:2531!2.67e-29!51;DOID:0060083!2.67e-29!51;DOID:0050686!6.23e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.37e-98;31!DOID:1240;5.63e-60;39!DOID:2531;6.97e-36;51!DOID:0060083;6.97e-36;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.12e-102,31;DOID:1240,5.88e-80,39;DOID:2531,1.21e-59,51;DOID:0060083,1.21e-59,51;DOID:0050686,3.01e-21,137;DOID:162,1.09e-09,235;DOID:14566,2.36e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.30e-12!57;UBERON:0005068!3.30e-12!57;UBERON:0006241!3.30e-12!57;UBERON:0007135!3.30e-12!57;UBERON:0007023!4.09e-11!115;UBERON:0001017!2.40e-10!82;UBERON:0000955!1.21e-09!69;UBERON:0006238!1.21e-09!69;UBERON:0002298!1.21e-09!8;UBERON:0002020!1.37e-09!34;UBERON:0003528!1.37e-09!34;UBERON:0005743!1.59e-09!86;UBERON:0002616!1.90e-09!59;UBERON:0001893!2.25e-09!34;UBERON:0002390!1.18e-08!102;UBERON:0003061!1.18e-08!102;UBERON:0002791!1.40e-08!33;UBERON:0002780!3.17e-08!41;UBERON:0001890!3.17e-08!41;UBERON:0006240!3.17e-08!41;UBERON:0000073!5.93e-08!94;UBERON:0001016!5.93e-08!94;UBERON:0003080!6.19e-08!42;UBERON:0002193!6.65e-08!112;UBERON:0001869!1.33e-07!32;UBERON:0001871!3.66e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.23e-07,371 | |||
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| ||
|short_description=p5@LMO2 | |short_description=p5@LMO2 | ||
}} | }} |
Latest revision as of 17:14, 17 September 2015
Short description: | p5@LMO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LMO2_5end |
Coexpression cluster: | C3146_acute_CD133_CD34_chronic_biphenotypic_myelodysplastic_granulocyte |
Association with transcript: | 286bp_to_ENST00000257818, NM_005574, uc010rem.1_5end |
EntrezGene: | LMO2 |
HGNC: | 6642 |
UniProt: | P25791 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 9.60e-41 | 108 |
common myeloid progenitor | 9.60e-41 | 108 |
hematopoietic stem cell | 2.10e-25 | 168 |
hematopoietic oligopotent progenitor cell | 5.92e-25 | 161 |
hematopoietic multipotent progenitor cell | 5.92e-25 | 161 |
hematopoietic cell | 9.89e-24 | 177 |
mesenchymal cell | 4.31e-08 | 354 |
connective tissue cell | 8.64e-08 | 361 |
motile cell | 2.11e-07 | 386 |
stem cell | 6.85e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.23e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.12e-102 | 31 |
leukemia | 5.88e-80 | 39 |
hematologic cancer | 1.21e-59 | 51 |
immune system cancer | 1.21e-59 | 51 |
organ system cancer | 3.01e-21 | 137 |
cancer | 1.09e-09 | 235 |
disease of cellular proliferation | 2.36e-09 | 239 |