FFCP PHASE1:Hg19::chr13:50589538..50589543,+: Difference between revisions
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|id=chr13:50589538..50589543,+
|short_description=p3@KCNRG
|description=CAGE_peak_3_at_KCNRG_5end
|association_with_transcript=148bp_to_ENST00000312942,ENST00000360...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283518 | |EntrezGene=283518 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18893 | |HGNC=18893 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5I3 | |UniProt=Q8N5I3 | ||
|association_with_transcript=148bp_to_ENST00000312942,ENST00000360473,NM_173605,NM_199464,uc001vdt.2,uc001vdu.2_5end | |||
|cluster_id=chr13:50589538..50589543,+ | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_3_at_KCNRG_5end | |||
|id=chr13:50589538..50589543,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.88e-21;29!UBERON:0001041;6.52e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!1.66e-22!2;UBERON:0001301!7.76e-12!1;UBERON:0005174!2.36e-09!5;UBERON:0001137!2.36e-09!5;UBERON:0005178!9.23e-08!34;UBERON:0002224!9.23e-08!34;UBERON:0005181!1.55e-07!35;UBERON:0003126!4.46e-07!7;UBERON:0001005!4.46e-07!7;UBERON:0003076!9.17e-07!15;UBERON:0003057!9.17e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.61e-34;2!UBERON:0005178;2.88e-14;34!UBERON:0002224;2.88e-14;34!UBERON:0002048;4.26e-13;22!UBERON:0000117;4.26e-13;22!UBERON:0000171;4.26e-13;22!UBERON:0000170;4.26e-13;22!UBERON:0003126;8.16e-11;7!UBERON:0001005;8.16e-11;7!UBERON:0005181;1.03e-09;35!UBERON:0000065;1.04e-09;44!UBERON:0000915;3.02e-09;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.61e-34,2;UBERON:0005178,1.78e-18,34;UBERON:0002224,1.78e-18,34;UBERON:0005181,5.55e-18,35;UBERON:0008947,1.18e-16,38;UBERON:0003258,1.18e-16,38;UBERON:0002048,4.26e-13,22;UBERON:0000117,4.26e-13,22;UBERON:0000171,4.26e-13,22;UBERON:0000170,4.26e-13,22;UBERON:0005597,4.26e-13,22;UBERON:0000118,4.26e-13,22;UBERON:0000915,1.77e-12,52;UBERON:0000065,4.68e-12,54;UBERON:0003126,8.16e-11,7;UBERON:0001005,8.16e-11,7;UBERON:0001004,4.40e-09,74;UBERON:0005153,3.03e-08,37;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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|short_description=p3@KCNRG | |||
}} | }} |
Latest revision as of 17:28, 17 September 2015
Short description: | p3@KCNRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNRG_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 148bp_to_ENST00000312942, ENST00000360473, NM_173605, NM_199464, uc001vdt.2, uc001vdu.2_5end |
EntrezGene: | KCNRG |
HGNC: | 18893 |
UniProt: | Q8N5I3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.61e-34 | 2 |
thoracic cavity element | 1.78e-18 | 34 |
thoracic cavity | 1.78e-18 | 34 |
thoracic segment organ | 5.55e-18 | 35 |
respiratory primordium | 1.18e-16 | 38 |
endoderm of foregut | 1.18e-16 | 38 |
lung | 4.26e-13 | 22 |
respiratory tube | 4.26e-13 | 22 |
respiration organ | 4.26e-13 | 22 |
pair of lungs | 4.26e-13 | 22 |
lung primordium | 4.26e-13 | 22 |
lung bud | 4.26e-13 | 22 |
thoracic segment of trunk | 1.77e-12 | 52 |
respiratory tract | 4.68e-12 | 54 |
trachea | 8.16e-11 | 7 |
respiratory airway | 8.16e-11 | 7 |
respiratory system | 4.40e-09 | 74 |
epithelial bud | 3.03e-08 | 37 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |