FFCP PHASE1:Hg19::chr15:43809789..43809795,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:43809789..43809795,+ to FFCP PHASE1:Hg19::chr15:43809789..43809795,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4130 | |EntrezGene=4130 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6835 | |HGNC=6835 | ||
|TSSclassifier=strong | |||
|UniProt=P78559,Q504X9 | |UniProt=P78559,Q504X9 | ||
|association_with_transcript=-10bp_to_ENST00000399453,NM_002373,uc001zrt.2_5end | |||
|cluster_id=chr15:43809789..43809795,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_4_at_MAP1A_5end | |||
|id=chr15:43809789..43809795,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.59e-26!180;CL:0000183!9.30e-16!59;CL:0000680!4.17e-15!57;CL:0000056!4.17e-15!57;CL:0000355!4.17e-15!57;CL:0000057!6.28e-15!75;CL:0000192!1.02e-14!42;CL:0000514!1.02e-14!42;CL:0000187!2.29e-14!54;CL:0000393!3.56e-12!60;CL:0000211!3.56e-12!60;CL:0000359!4.27e-12!32;CL:0002620!8.21e-08!23;CL:0002334!3.07e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;2.99e-10;12!CL:0000359;3.97e-09;32!CL:0002620;1.32e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.87e-13,76;CL:0002334,3.90e-10,12;CL:0000192,1.19e-09,43;CL:0000514,1.19e-09,43;CL:0000187,2.28e-09,55;CL:0000680,2.81e-09,58;CL:0000056,2.81e-09,58;CL:0000355,2.81e-09,58;CL:0000359,6.47e-09,32;CL:0000393,1.35e-07,61;CL:0000211,1.35e-07,61;CL:0002620,2.04e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.66e-29!57;UBERON:0005068!2.66e-29!57;UBERON:0006241!2.66e-29!57;UBERON:0007135!2.66e-29!57;UBERON:0002616!4.04e-28!59;UBERON:0001017!8.48e-26!82;UBERON:0000955!1.13e-25!69;UBERON:0006238!1.13e-25!69;UBERON:0005743!6.33e-25!86;UBERON:0000073!3.58e-24!94;UBERON:0001016!3.58e-24!94;UBERON:0002780!1.35e-22!41;UBERON:0001890!1.35e-22!41;UBERON:0006240!1.35e-22!41;UBERON:0003075!1.83e-22!86;UBERON:0007284!1.83e-22!86;UBERON:0003080!1.49e-21!42;UBERON:0002346!2.46e-21!90;UBERON:0001893!4.20e-21!34;UBERON:0002020!5.26e-21!34;UBERON:0003528!5.26e-21!34;UBERON:0007023!1.86e-20!115;UBERON:0002791!2.53e-20!33;UBERON:0001869!5.49e-20!32;UBERON:0000475!1.31e-19!365;UBERON:0000914!1.60e-17!83;UBERON:0002329!1.60e-17!83;UBERON:0003077!1.60e-17!83;UBERON:0003059!1.60e-17!83;UBERON:0007282!1.60e-17!83;UBERON:0009618!1.60e-17!83;UBERON:0007285!1.60e-17!83;UBERON:0000033!4.46e-17!123;UBERON:0000153!7.92e-17!129;UBERON:0007811!7.92e-17!129;UBERON:0003056!2.48e-16!61;UBERON:0002619!1.06e-15!22;UBERON:0004290!1.32e-15!70;UBERON:0000956!3.69e-15!25;UBERON:0000203!3.69e-15!25;UBERON:0002385!2.57e-14!63;UBERON:0001015!2.57e-14!63;UBERON:0000383!2.57e-14!63;UBERON:0001950!3.03e-14!20;UBERON:0001134!4.72e-14!61;UBERON:0002036!4.72e-14!61;UBERON:0003082!4.72e-14!61;UBERON:0004121!1.21e-13!169;UBERON:0000025!2.66e-13!194;UBERON:0000924!3.00e-13!173;UBERON:0006601!3.00e-13!173;UBERON:0000119!2.82e-12!312;UBERON:0000483!3.50e-12!309;UBERON:0000477!3.92e-11!286;UBERON:0000486!4.23e-11!82;UBERON:0004111!7.75e-11!241;UBERON:0000481!4.86e-10!347;UBERON:0000468!5.53e-09!659;UBERON:0003076!7.36e-09!15;UBERON:0003057!7.36e-09!15;UBERON:0004732!6.25e-08!13;UBERON:0004573!9.11e-08!33;UBERON:0004571!9.11e-08!33;UBERON:0001637!1.07e-07!42;UBERON:0003509!1.07e-07!42;UBERON:0004572!1.07e-07!42;UBERON:0002420!1.66e-07!9;UBERON:0007245!1.66e-07!9;UBERON:0010009!1.66e-07!9;UBERON:0010011!1.66e-07!9;UBERON:0000454!1.66e-07!9;UBERON:0005256!2.05e-07!143;UBERON:0004733!2.22e-07!12;UBERON:0002028!2.22e-07!12;UBERON:0007277!2.22e-07!12;UBERON:0000467!2.34e-07!625;UBERON:0002308!2.40e-07!9;UBERON:0000125!2.40e-07!9;UBERON:0000480!3.20e-07!626;UBERON:0000479!3.71e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.39e-24;34!UBERON:0001869;1.42e-23;32!UBERON:0003528;1.59e-23;34!UBERON:0002020;1.59e-23;34!UBERON:0002791;4.84e-23;32!UBERON:0002619;5.27e-23;22!UBERON:0002780;1.91e-21;41!UBERON:0001890;1.91e-21;41!UBERON:0001950;8.57e-21;20!UBERON:0000073;1.01e-20;53!UBERON:0002616;1.01e-20;53!UBERON:0000956;2.64e-19;25!UBERON:0000203;2.64e-19;25!UBERON:0001017;1.20e-14;75!UBERON:0000955;3.36e-14;68!UBERON:0001016;1.22e-11;83!UBERON:0002420;2.73e-10;9!UBERON:0007245;2.73e-10;9!UBERON:0010009;2.73e-10;9!UBERON:0010011;2.73e-10;9!UBERON:0000454;2.73e-10;9!UBERON:0000125;5.14e-10;9!UBERON:0002308;5.14e-10;9!UBERON:0004732;8.52e-09;13!UBERON:0000200;1.55e-08;6!UBERON:0009663;4.74e-08;7!UBERON:0004733;4.81e-08;12!UBERON:0002028;4.81e-08;12!UBERON:0004573;1.44e-07;33!UBERON:0004571;1.44e-07;33!UBERON:0000349;3.11e-07;5!UBERON:0002298;6.97e-07;6 | |||
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| ||
|short_description=p4@MAP1A | |||
}} | }} |
Latest revision as of 17:28, 17 September 2015
Short description: | p4@MAP1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAP1A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -10bp_to_ENST00000399453, NM_002373, uc001zrt.2_5end |
EntrezGene: | MAP1A |
HGNC: | 6835 |
UniProt: | P78559Q504X9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.87e-13 | 76 |
preadipocyte | 3.90e-10 | 12 |
smooth muscle cell | 1.19e-09 | 43 |
smooth muscle myoblast | 1.19e-09 | 43 |
muscle cell | 2.28e-09 | 55 |
muscle precursor cell | 2.81e-09 | 58 |
myoblast | 2.81e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.81e-09 | 58 |
vascular associated smooth muscle cell | 6.47e-09 | 32 |
electrically responsive cell | 1.35e-07 | 61 |
electrically active cell | 1.35e-07 | 61 |
skin fibroblast | 2.04e-07 | 23 |