FFCP PHASE1:Hg19::chr5:34656529..34656549,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26064 | |EntrezGene=26064 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14873 | |HGNC=14873 | ||
|TSSclassifier=strong | |||
|UniProt=E9PED3,D6R9G6 | |UniProt=E9PED3,D6R9G6 | ||
|association_with_transcript=0bp_to_ENST00000512629,ENST00000513974_5end | |association_with_transcript=0bp_to_ENST00000512629,ENST00000513974_5end | ||
|cluster_id=chr5:34656529..34656549,+ | |||
|coexpression_cluster_id=C4495 | |coexpression_cluster_id=C4495 | ||
|description=CAGE_peak_3_at_RAI14_5end | |description=CAGE_peak_3_at_RAI14_5end | ||
|id=chr5:34656529..34656549,+ | |id=chr5:34656529..34656549,+ | ||
|ontology_enrichment_celltype=CL:0002139;2.01e-18;24!CL:0000071;5.02e-14;18!CL:0000115;1.54e-13;36!CL:0000359;3.31e-11;32!CL:0000213;1.58e-09;58!CL:0000215;1.58e-09;58!CL:0002078;4.10e-09;45!CL:0000192;1.26e-08;43!CL:1000413;1.13e-07;9!CL:0000187;1.28e-07;55!CL:0002494;3.76e-07;16!CL:0000057;9.54e-07;73 | |ontology_enrichment_celltype=CL:0000222!1.85e-28!119;CL:0000055!4.39e-25!180;CL:0000220!2.75e-20!246;CL:0002321!3.95e-20!248;CL:0002139!3.45e-17!24;CL:0000115!3.50e-14!35;CL:0000213!3.72e-14!57;CL:0000215!3.72e-14!57;CL:0000680!9.06e-14!57;CL:0000056!9.06e-14!57;CL:0000355!9.06e-14!57;CL:0000071!4.11e-13!18;CL:0002546!4.11e-13!18;CL:0000057!5.30e-13!75;CL:0000187!6.48e-13!54;CL:0002078!1.90e-12!44;CL:0000183!1.61e-11!59;CL:0000393!1.61e-11!60;CL:0000211!1.61e-11!60;CL:0000192!2.53e-11!42;CL:0000514!2.53e-11!42;CL:0000359!4.72e-11!32;CL:0000144!5.94e-08!625;CL:1000413!3.20e-07!9;CL:0002371!7.19e-07!591;CL:0000548!8.42e-07!679;CL:0000004!8.42e-07!679;CL:0000255!8.42e-07!679;CL:0002494!8.43e-07!16 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;2.01e-18;24!CL:0000071;5.02e-14;18!CL:0000115;1.54e-13;36!CL:0000359;3.31e-11;32!CL:0000213;1.58e-09;58!CL:0000215;1.58e-09;58!CL:0002078;4.10e-09;45!CL:0000192;1.26e-08;43!CL:1000413;1.13e-07;9!CL:0000187;1.28e-07;55!CL:0002494;3.76e-07;16!CL:0000057;9.54e-07;73 | ||
|ontology_enrichment_disease=DOID:2394;1.23e-08;14!DOID:120;3.50e-07;27!DOID:193;4.30e-07;29 | |ontology_enrichment_celltype_v019_2=CL:0000222,1.51e-30,121;CL:0002321,3.93e-19,250;CL:0002139,2.40e-18,24;CL:0000115,9.10e-16,36;CL:0000213,1.93e-15,58;CL:0000215,1.93e-15,58;CL:0000680,2.27e-14,58;CL:0000056,2.27e-14,58;CL:0000355,2.27e-14,58;CL:0000057,2.63e-14,76;CL:0000071,5.72e-14,18;CL:0002546,5.72e-14,18;CL:0002078,1.18e-13,45;CL:0000187,1.86e-13,55;CL:0000359,9.34e-12,32;CL:0000192,1.02e-11,43;CL:0000514,1.02e-11,43;CL:0000393,1.38e-11,61;CL:0000211,1.38e-11,61;CL:1000413,1.21e-07,9;CL:0002494,3.43e-07,16 | ||
|ontology_enrichment_uberon=UBERON:0000055;8.56e-15;65!UBERON:0007500;9.47e-15;56!UBERON:0001981;9.47e-15;56!UBERON:0004537;9.47e-15;56!UBERON:0002049;2.89e-14;75!UBERON:0007798;2.89e-14;75!UBERON:0004638;5.02e-14;18!UBERON:0001986;5.02e-14;18!UBERON:0004852;5.02e-14;18!UBERON:0000487;1.93e-13;22!UBERON:0001637;4.79e-13;42!UBERON:0003509;4.79e-13;42!UBERON:0004572;4.79e-13;42!UBERON:0004573;6.90e-13;33!UBERON:0004571;6.90e-13;33!UBERON:0006914;1.13e-11;25!UBERON:0000947;8.98e-11;21!UBERON:0010191;8.98e-11;21!UBERON:0000490;5.68e-10;33!UBERON:0003914;6.21e-10;74!UBERON:0004535;2.88e-08;109!UBERON:0001009;7.82e-08;112!UBERON:0003915;1.13e-07;9!UBERON:0004700;1.13e-07;9!UBERON:0001917;1.13e-07;9!UBERON:0001638;3.23e-07;9!UBERON:0003920;3.23e-07;9!UBERON:0004582;3.23e-07;9 | |ontology_enrichment_development_v019=CL:0002546;5.02e-14;18!CL:0000222;4.06e-09;121!CL:0000514;1.26e-08;43!CL:0000355;7.85e-08;58 | ||
|ontology_enrichment_disease=DOID:2394!3.92e-08!14;DOID:120!5.36e-07!27;DOID:193!5.83e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.23e-08;14!DOID:120;3.50e-07;27!DOID:193;4.30e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.27e-08,14;DOID:120,4.26e-07,27;DOID:193,4.54e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0002049!1.58e-31!79;UBERON:0007798!1.58e-31!79;UBERON:0004872!9.16e-28!84;UBERON:0000055!5.99e-27!69;UBERON:0001981!1.73e-24!60;UBERON:0007500!1.73e-24!60;UBERON:0004537!1.73e-24!60;UBERON:0006965!1.73e-24!60;UBERON:0004535!5.87e-23!110;UBERON:0001009!8.72e-22!113;UBERON:0003914!1.18e-21!118;UBERON:0000490!2.62e-19!138;UBERON:0000914!5.64e-17!83;UBERON:0002329!5.64e-17!83;UBERON:0003077!5.64e-17!83;UBERON:0003059!5.64e-17!83;UBERON:0007282!5.64e-17!83;UBERON:0009618!5.64e-17!83;UBERON:0007285!5.64e-17!83;UBERON:0001637!5.46e-16!42;UBERON:0003509!5.46e-16!42;UBERON:0004572!5.46e-16!42;UBERON:0000468!1.09e-15!659;UBERON:0005256!1.16e-15!143;UBERON:0000467!1.81e-15!625;UBERON:0000480!3.80e-15!626;UBERON:0004290!1.95e-14!70;UBERON:0000486!9.13e-14!82;UBERON:0000119!2.77e-13!312;UBERON:0001986!4.11e-13!18;UBERON:0004638!4.11e-13!18;UBERON:0004852!4.11e-13!18;UBERON:0001134!4.62e-13!61;UBERON:0002036!4.62e-13!61;UBERON:0003082!4.62e-13!61;UBERON:0000477!4.69e-13!286;UBERON:0002385!8.31e-13!63;UBERON:0001015!8.31e-13!63;UBERON:0000383!8.31e-13!63;UBERON:0004573!1.02e-12!33;UBERON:0004571!1.02e-12!33;UBERON:0000487!1.26e-12!22;UBERON:0000483!1.71e-12!309;UBERON:0002100!1.63e-11!216;UBERON:0006914!3.91e-11!25;UBERON:0004111!4.62e-11!241;UBERON:0000947!4.97e-10!21;UBERON:0010191!4.97e-10!21;UBERON:0000926!7.67e-10!448;UBERON:0004120!7.67e-10!448;UBERON:0006603!7.67e-10!448;UBERON:0000475!3.54e-09!365;UBERON:0003104!5.82e-09!238;UBERON:0009142!5.82e-09!238;UBERON:0002050!1.01e-08!605;UBERON:0005423!1.01e-08!605;UBERON:0000922!1.47e-08!612;UBERON:0000923!1.56e-08!604;UBERON:0005291!1.56e-08!604;UBERON:0006598!1.56e-08!604;UBERON:0002532!1.56e-08!604;UBERON:0000481!1.83e-08!347;UBERON:0000025!1.04e-07!194;UBERON:0003915!3.20e-07!9;UBERON:0004700!3.20e-07!9;UBERON:0001917!3.20e-07!9;UBERON:0001638!9.14e-07!9;UBERON:0003920!9.14e-07!9;UBERON:0004582!9.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;8.56e-15;65!UBERON:0007500;9.47e-15;56!UBERON:0001981;9.47e-15;56!UBERON:0004537;9.47e-15;56!UBERON:0002049;2.89e-14;75!UBERON:0007798;2.89e-14;75!UBERON:0004638;5.02e-14;18!UBERON:0001986;5.02e-14;18!UBERON:0004852;5.02e-14;18!UBERON:0000487;1.93e-13;22!UBERON:0001637;4.79e-13;42!UBERON:0003509;4.79e-13;42!UBERON:0004572;4.79e-13;42!UBERON:0004573;6.90e-13;33!UBERON:0004571;6.90e-13;33!UBERON:0006914;1.13e-11;25!UBERON:0000947;8.98e-11;21!UBERON:0010191;8.98e-11;21!UBERON:0000490;5.68e-10;33!UBERON:0003914;6.21e-10;74!UBERON:0004535;2.88e-08;109!UBERON:0001009;7.82e-08;112!UBERON:0003915;1.13e-07;9!UBERON:0004700;1.13e-07;9!UBERON:0001917;1.13e-07;9!UBERON:0001638;3.23e-07;9!UBERON:0003920;3.23e-07;9!UBERON:0004582;3.23e-07;9 | |||
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| ||
|short_description=p3@RAI14 | |short_description=p3@RAI14 | ||
}} | }} |
Latest revision as of 17:32, 17 September 2015
Short description: | p3@RAI14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RAI14_5end |
Coexpression cluster: | C4495_Endothelial_Lymphatic_Mast_gall_Iris_osteosarcoma_Lens |
Association with transcript: | 0bp_to_ENST00000512629, ENST00000513974_5end |
EntrezGene: | RAI14 |
HGNC: | 14873 |
UniProt: | E9PED3D6R9G6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.51e-30 | 121 |
embryonic cell | 3.93e-19 | 250 |
endothelial cell of vascular tree | 2.40e-18 | 24 |
endothelial cell | 9.10e-16 | 36 |
lining cell | 1.93e-15 | 58 |
barrier cell | 1.93e-15 | 58 |
muscle precursor cell | 2.27e-14 | 58 |
myoblast | 2.27e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.27e-14 | 58 |
fibroblast | 2.63e-14 | 76 |
blood vessel endothelial cell | 5.72e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.72e-14 | 18 |
meso-epithelial cell | 1.18e-13 | 45 |
muscle cell | 1.86e-13 | 55 |
vascular associated smooth muscle cell | 9.34e-12 | 32 |
smooth muscle cell | 1.02e-11 | 43 |
smooth muscle myoblast | 1.02e-11 | 43 |
electrically responsive cell | 1.38e-11 | 61 |
electrically active cell | 1.38e-11 | 61 |
endothelial cell of artery | 1.21e-07 | 9 |
cardiocyte | 3.43e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.27e-08 | 14 |
female reproductive organ cancer | 4.26e-07 | 27 |
reproductive organ cancer | 4.54e-07 | 29 |