FFCP PHASE1:Hg19::chr6:30654376..30654395,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:30654376..30654395,-
|short_description=p5@PPP1R18
|description=CAGE_peak_5_at_PPP1R18_5end
|association_with_transcript=26bp_to_AL832742_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_AL832742_5end | |||
|cluster_id=chr6:30654376..30654395,- | |||
|coexpression_cluster_id=C4590 | |||
|description=CAGE_peak_5_at_PPP1R18_5end | |||
|id=chr6:30654376..30654395,- | |||
|ontology_enrichment_celltype=CL:0002371!1.48e-18!591;CL:0002057!1.24e-15!42;CL:0000144!8.75e-15!625;CL:0000860!2.59e-13!45;CL:0000222!4.49e-13!119;CL:0000115!1.08e-10!35;CL:0000766!1.18e-10!76;CL:0000548!8.31e-10!679;CL:0000004!8.31e-10!679;CL:0000255!8.31e-10!679;CL:0002139!8.98e-10!24;CL:0000012!2.38e-09!682;CL:0002078!2.51e-09!44;CL:0000723!4.50e-09!436;CL:0000048!9.04e-09!430;CL:0000359!2.19e-08!32;CL:0000055!2.89e-08!180;CL:0000192!3.32e-08!42;CL:0000514!3.32e-08!42;CL:0002194!3.90e-08!63;CL:0000576!3.90e-08!63;CL:0000040!3.90e-08!63;CL:0000559!3.90e-08!63;CL:0000034!5.59e-08!444;CL:0002009!9.68e-08!65;CL:0000213!1.36e-07!57;CL:0000215!1.36e-07!57;CL:0000071!1.38e-07!18;CL:0002546!1.38e-07!18;CL:0000003!1.83e-07!722;CL:0000557!4.61e-07!71;CL:0000183!7.94e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.11e-11;33!CL:0002057;3.11e-11;33!CL:0002139;5.50e-10;24!CL:0000115;1.68e-09;36!CL:0000576;2.06e-08;48!CL:0000359;3.25e-08;32!CL:0000071;8.60e-08;18!CL:0002078;4.43e-07;45!CL:0000473;4.43e-07;39!CL:0000234;4.43e-07;39!CL:0000192;6.03e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.26e-16,42;CL:0002057,9.26e-16,42;CL:0000222,7.94e-14,121;CL:0000473,1.73e-12,48;CL:0000234,1.73e-12,48;CL:0000766,4.39e-12,72;CL:0000115,4.46e-11,36;CL:0000723,3.88e-10,433;CL:0000048,7.26e-10,427;CL:0002139,7.58e-10,24;CL:0002078,1.10e-09,45;CL:0002194,1.89e-09,59;CL:0000576,1.89e-09,59;CL:0000040,1.89e-09,59;CL:0000559,1.89e-09,59;CL:0002009,5.63e-09,61;CL:0000034,5.82e-09,441;CL:0000192,1.21e-08,43;CL:0000514,1.21e-08,43;CL:0000359,1.90e-08,32;CL:0000557,3.82e-08,67;CL:0000213,6.19e-08,58;CL:0000215,6.19e-08,58;CL:0000839,1.02e-07,66;CL:0000071,1.22e-07,18;CL:0002546,1.22e-07,18;CL:0000680,6.75e-07,58;CL:0000056,6.75e-07,58;CL:0000355,6.75e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-11;42!CL:0002546;8.60e-08;18!CL:0000514;6.03e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.18e-23!216;UBERON:0004535!5.72e-19!110;UBERON:0000055!5.90e-19!69;UBERON:0002049!3.40e-18!79;UBERON:0007798!3.40e-18!79;UBERON:0001009!6.46e-18!113;UBERON:0001981!2.78e-16!60;UBERON:0007500!2.78e-16!60;UBERON:0004537!2.78e-16!60;UBERON:0006965!2.78e-16!60;UBERON:0004872!5.54e-15!84;UBERON:0001637!4.37e-14!42;UBERON:0003509!4.37e-14!42;UBERON:0004572!4.37e-14!42;UBERON:0002204!2.55e-13!167;UBERON:0000926!7.94e-13!448;UBERON:0004120!7.94e-13!448;UBERON:0006603!7.94e-13!448;UBERON:0004573!1.75e-11!33;UBERON:0004571!1.75e-11!33;UBERON:0002193!2.32e-10!112;UBERON:0000947!2.87e-08!21;UBERON:0010191!2.87e-08!21;UBERON:0002390!1.05e-07!102;UBERON:0003061!1.05e-07!102;UBERON:0001986!1.38e-07!18;UBERON:0004638!1.38e-07!18;UBERON:0004852!1.38e-07!18;UBERON:0004765!2.72e-07!101;UBERON:0001434!2.72e-07!101;UBERON:0000486!2.81e-07!82;UBERON:0003914!2.95e-07!118;UBERON:0002371!9.43e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.78e-10;33!UBERON:0004571;1.78e-10;33!UBERON:0001637;2.43e-10;42!UBERON:0003509;2.43e-10;42!UBERON:0004572;2.43e-10;42!UBERON:0000055;7.44e-10;65!UBERON:0007500;8.25e-10;56!UBERON:0001981;8.25e-10;56!UBERON:0004537;8.25e-10;56!UBERON:0000947;2.76e-08;21!UBERON:0010191;2.76e-08;21!UBERON:0002049;8.31e-08;75!UBERON:0007798;8.31e-08;75!UBERON:0004638;8.60e-08;18!UBERON:0001986;8.60e-08;18!UBERON:0004852;8.60e-08;18 | |||
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| ||
|short_description=p5@PPP1R18 | |||
}} | }} |
Latest revision as of 17:43, 17 September 2015
Short description: | p5@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PPP1R18_5end |
Coexpression cluster: | C4590_Neutrophils_Eosinophils_Whole_embryonic_osteosarcoma_Fibroblast_CD14 |
Association with transcript: | 26bp_to_AL832742_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.26e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.26e-16 | 42 |
mesodermal cell | 7.94e-14 | 121 |
defensive cell | 1.73e-12 | 48 |
phagocyte | 1.73e-12 | 48 |
myeloid leukocyte | 4.39e-12 | 72 |
endothelial cell | 4.46e-11 | 36 |
somatic stem cell | 3.88e-10 | 433 |
multi fate stem cell | 7.26e-10 | 427 |
endothelial cell of vascular tree | 7.58e-10 | 24 |
meso-epithelial cell | 1.10e-09 | 45 |
monopoietic cell | 1.89e-09 | 59 |
monocyte | 1.89e-09 | 59 |
monoblast | 1.89e-09 | 59 |
promonocyte | 1.89e-09 | 59 |
macrophage dendritic cell progenitor | 5.63e-09 | 61 |
stem cell | 5.82e-09 | 441 |
smooth muscle cell | 1.21e-08 | 43 |
smooth muscle myoblast | 1.21e-08 | 43 |
vascular associated smooth muscle cell | 1.90e-08 | 32 |
granulocyte monocyte progenitor cell | 3.82e-08 | 67 |
lining cell | 6.19e-08 | 58 |
barrier cell | 6.19e-08 | 58 |
myeloid lineage restricted progenitor cell | 1.02e-07 | 66 |
blood vessel endothelial cell | 1.22e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.22e-07 | 18 |
muscle precursor cell | 6.75e-07 | 58 |
myoblast | 6.75e-07 | 58 |
multi-potent skeletal muscle stem cell | 6.75e-07 | 58 |