FFCP PHASE1:Hg19::chr5:35231034..35231044,-: Difference between revisions
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|id=chr5:35231034..35231044,-
|short_description=p19@PRLR
|description=CAGE_peak_19_at_PRLR_5end
|association_with_transcript=-211bp_to_NM_000949_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5618 | |EntrezGene=5618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9446 | |HGNC=9446 | ||
|TSSclassifier=strong | |||
|UniProt=P16471 | |UniProt=P16471 | ||
|association_with_transcript=-211bp_to_NM_000949_5end | |||
|cluster_id=chr5:35231034..35231044,- | |||
|description=CAGE_peak_19_at_PRLR_5end | |||
|id=chr5:35231034..35231044,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-22!115;UBERON:0001049!4.47e-15!57;UBERON:0005068!4.47e-15!57;UBERON:0006241!4.47e-15!57;UBERON:0007135!4.47e-15!57;UBERON:0006947!1.62e-14!3;UBERON:0004054!1.62e-14!3;UBERON:0005743!1.82e-14!86;UBERON:0001017!9.80e-14!82;UBERON:0000073!1.07e-12!94;UBERON:0001016!1.07e-12!94;UBERON:0002616!1.75e-12!59;UBERON:0002780!7.01e-12!41;UBERON:0001890!7.01e-12!41;UBERON:0006240!7.01e-12!41;UBERON:0003075!1.39e-11!86;UBERON:0007284!1.39e-11!86;UBERON:0000955!1.48e-11!69;UBERON:0006238!1.48e-11!69;UBERON:0003080!1.51e-11!42;UBERON:0005904!5.33e-11!4;UBERON:0002346!6.74e-11!90;UBERON:0000007!2.31e-10!2;UBERON:0000369!5.14e-10!4;UBERON:0002435!5.14e-10!4;UBERON:0000204!5.14e-10!4;UBERON:0010082!5.14e-10!4;UBERON:0003056!1.28e-08!61;UBERON:0000349!2.75e-08!5;UBERON:0002791!2.84e-08!33;UBERON:0002020!4.63e-08!34;UBERON:0003528!4.63e-08!34;UBERON:0001893!5.39e-08!34;UBERON:0002420!1.00e-07!9;UBERON:0007245!1.00e-07!9;UBERON:0010009!1.00e-07!9;UBERON:0010011!1.00e-07!9;UBERON:0000454!1.00e-07!9;UBERON:0002308!1.02e-07!9;UBERON:0000125!1.02e-07!9;UBERON:0001896!7.58e-07!3;UBERON:0005290!7.58e-07!3;UBERON:0010096!7.58e-07!3;UBERON:0001869!8.83e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;5.12e-50;1!UBERON:0001000;5.12e-50;1!UBERON:0005352;5.12e-50;1!UBERON:0000007;4.90e-26;2!UBERON:0004175;5.30e-22;21!UBERON:0006947;1.03e-17;3!UBERON:0004054;1.03e-17;3!UBERON:0003296;9.39e-14;4!UBERON:0010133;9.39e-14;4!UBERON:0005904;1.21e-13;4!UBERON:0000995;1.03e-12;17!UBERON:0003975;4.55e-12;18!UBERON:0000002;1.27e-09;6!UBERON:0001560;1.27e-09;6!UBERON:0003133;1.36e-08;44!UBERON:0001894;1.96e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,3.99e-50,1;UBERON:0005352,3.99e-50,1;UBERON:0006834,6.58e-50,1;UBERON:0000007,5.56e-26,2;UBERON:0004175,1.15e-18,25;UBERON:0006947,9.46e-18,3;UBERON:0004054,9.46e-18,3;UBERON:0003296,1.00e-13,4;UBERON:0010133,1.00e-13,4;UBERON:0005904,1.13e-13,4;UBERON:0000995,1.69e-10,21;UBERON:0003133,3.53e-10,48;UBERON:0005795,4.53e-10,22;UBERON:0003975,4.53e-10,22;UBERON:0000002,1.22e-09,6;UBERON:0001560,1.22e-09,6;UBERON:0005156,1.93e-08,59;UBERON:0000990,1.93e-08,59;UBERON:0001894,2.03e-08,7;UBERON:0006222,2.03e-08,7;UBERON:0007023,8.86e-08,114 | |||
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| ||
|short_description=p19@PRLR | |||
}} | }} |
Latest revision as of 18:20, 17 September 2015
Short description: | p19@PRLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PRLR_5end |
Coexpression cluster: | NA |
Association with transcript: | -211bp_to_NM_000949_5end |
EntrezGene: | PRLR |
HGNC: | 9446 |
UniProt: | P16471 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vas deferens | 3.99e-50 | 1 |
spermatic cord | 3.99e-50 | 1 |
uterus or analog | 6.58e-50 | 1 |
pituitary gland | 5.56e-26 | 2 |
internal genitalia | 1.15e-18 | 25 |
male genital duct | 9.46e-18 | 3 |
internal male genitalia | 9.46e-18 | 3 |
gland of diencephalon | 1.00e-13 | 4 |
neuroendocrine gland | 1.00e-13 | 4 |
duct of male reproductive system | 1.13e-13 | 4 |
uterus | 1.69e-10 | 21 |
reproductive organ | 3.53e-10 | 48 |
embryonic uterus | 4.53e-10 | 22 |
internal female genitalia | 4.53e-10 | 22 |
uterine cervix | 1.22e-09 | 6 |
neck of organ | 1.22e-09 | 6 |
reproductive structure | 1.93e-08 | 59 |
reproductive system | 1.93e-08 | 59 |
diencephalon | 2.03e-08 | 7 |
future diencephalon | 2.03e-08 | 7 |
adult organism | 8.86e-08 | 114 |