FFCP PHASE1:Hg19::chr2:56150576..56150590,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2202 | |EntrezGene=2202 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3218 | |HGNC=3218 | ||
|TSSclassifier=strong | |||
|UniProt=Q12805 | |UniProt=Q12805 | ||
|association_with_transcript=-220bp_to_ENST00000394554,uc002rzh.2_5end | |association_with_transcript=-220bp_to_ENST00000394554,uc002rzh.2_5end | ||
|cluster_id=chr2:56150576..56150590,- | |||
|description=CAGE_peak_9_at_EFEMP1_5end | |description=CAGE_peak_9_at_EFEMP1_5end | ||
|id=chr2:56150576..56150590,- | |id=chr2:56150576..56150590,- | ||
|ontology_enrichment_celltype=CL:0000066!8.66e-08!254;CL:0000076!1.54e-07!62;CL:0000057!4.14e-07!75 | |ontology_enrichment_celltype=CL:0000066!8.66e-08!254;CL:0000076!1.54e-07!62;CL:0000057!4.14e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.75e-11;9!CL:0000447;2.75e-11;9!CL:0002548;6.35e-10;6!CL:0002580;1.55e-09;3!CL:0002623;1.55e-09;3!CL:0000135;2.86e-09;3!CL:0000214;2.86e-09;3!CL:0000388;2.86e-09;3!CL:0002581;1.43e-07;1!CL:0002616;1.43e-07;1!CL:0000499;1.70e-07;28!CL:0000327;8.16e-07;15 | |ontology_enrichment_celltype_v019=CL:0000153;2.75e-11;9!CL:0000447;2.75e-11;9!CL:0002548;6.35e-10;6!CL:0002580;1.55e-09;3!CL:0002623;1.55e-09;3!CL:0000135;2.86e-09;3!CL:0000214;2.86e-09;3!CL:0000388;2.86e-09;3!CL:0002581;1.43e-07;1!CL:0002616;1.43e-07;1!CL:0000499;1.70e-07;28!CL:0000327;8.16e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000153,2.55e-11,9;CL:0000447,2.55e-11,9;CL:0002548,8.28e-10,6;CL:0002623,1.46e-09,3;CL:0002580,1.97e-09,3;CL:0000214,2.53e-09,3;CL:0000135,2.64e-09,3;CL:0000388,2.64e-09,3;CL:0002616,8.28e-08,1;CL:0002581,1.07e-07,1;CL:0000499,1.60e-07,28;CL:0000327,7.80e-07,15 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5662;1.43e-07;1 | |ontology_enrichment_disease_v019=DOID:5662;1.43e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5662,1.39e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;1.84e-13;2!UBERON:0007846;2.86e-09;3!UBERON:0006915;2.86e-09;3!UBERON:0007616;2.86e-09;3!UBERON:0000043;2.86e-09;3!UBERON:0007845;2.86e-09;3!UBERON:0002217;2.86e-09;3!UBERON:0002018;2.86e-09;3!UBERON:0000997;1.43e-07;1!UBERON:0005056;1.43e-07;1!UBERON:0004176;1.43e-07;1!UBERON:0004457;9.15e-07;9!UBERON:0000042;9.15e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0005406;1.84e-13;2!UBERON:0007846;2.86e-09;3!UBERON:0006915;2.86e-09;3!UBERON:0007616;2.86e-09;3!UBERON:0000043;2.86e-09;3!UBERON:0007845;2.86e-09;3!UBERON:0002217;2.86e-09;3!UBERON:0002018;2.86e-09;3!UBERON:0000997;1.43e-07;1!UBERON:0005056;1.43e-07;1!UBERON:0004176;1.43e-07;1!UBERON:0004457;9.15e-07;9!UBERON:0000042;9.15e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,8.12e-14,2;UBERON:0006915,2.53e-09,3;UBERON:0007616,2.53e-09,3;UBERON:0002217,2.53e-09,3;UBERON:0002018,2.53e-09,3;UBERON:0007846,2.64e-09,3;UBERON:0000043,2.64e-09,3;UBERON:0007845,2.64e-09,3;UBERON:0000997,7.26e-08,1;UBERON:0005056,7.26e-08,1 | |||
|phase1_expression=1.2717486548939,0.856402095563933,0.422863212287913,1.0007329835313,0,1.74467704820074,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.895037932904712,0.361439152384566,1.00267582127178,1.88300474649071,0,0.973269740605272,0.0945348171640679,0,0.263504357079378,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.775250277507987,0.35576626268671,0.33472061276467,0,0,0.976248230192678,0,0,0.446498641420399,0,0.225222960966644,0,0,0.366403487860815,0,0,0,0.496971951695318,1.01304409331664,0.794455084879313,0.286836620748814,0.354668382198357,1.12135520028461,1.06748995729705,0.49333509683432,1.55605517699883,0,0,0.454072282934794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907457465280168,0.179389635688862,0.427114777637135,0.635795703478686,0,0.412210116953756,0,0,0.337552664482532,0.0974370051611986,0.252433774244115,0.276149695926898,0,0.355009592516614,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0.217879444092406,0,0.404493924480493,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.219500570817251,1.1240175325762,0.100528972411631,0.555530670951178,0,0,1.44331342025273,0,0.469634776943287,0.866198686566443,0,0.380508304469197,0,0.858486162094873,0,0,0,0,0.335964256397719,0,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0.157702415033935,0.35142424497814,0,0,1.03473071292505,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,2.30192959932094,1.12264037773229,0.768834895534206,0,0.804269605718038,1.48418066444991,0,0,0,0,0,0,0,0.368323955743585,0.229628896329213,0,0,0,0,0,0,0,0,0,0.863663664408557,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.991709492165869,1.72971060628596,0.638063562472921,0.4046311234222,0,0,0,0,0,0,0.37064843820784,0,0,0,1.5250415513906,0,0,0.318203247925937,0,0.359744915166629,0,0.235624804691373,0.404364963146632,0,0,0,0.487426979262569,0,0,0,0,0,1.99031692572366,0.876901770507525,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0,1.47775344708365,1.31717957183961,0,0,0.673554789078584,0.670302275535787,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614321404198464,0,0,0.111308705022906,0,0,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0.227586896570999,0.254253650292766,0,0,0,0,0,0,0,0,0,0.219385397153973,0.10893846351899,8.5048484009948,0,0.341826167541004,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,1.86185555087318,0.522355239482415,0,0,0,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0.225980740780532,0.822251547880505,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0.288950589901519,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0.104909176269996,0,0.179287339332845,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,1.27668251554036,0.544017803369474,0.5013797880454,0.306345576763462,0.327872630709804,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0.624902039810533,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.97894681802587,0.179088841081487,3.39681591877069,0.877136198314828,0,0.192914038270915,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0.205116364240755,0,0,0,0,0.294443155503077,0.471878893390961,0.366857197043358,0,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,4.98273467794422,0,0,0,0,0.266107110487916,0,1.37190407549935,0,0,0.236387681767936,0,0.313972371402056,0,0,0,0,0,0.571812353413251,0,0,0,0,1.45051314914126,2.0486217251274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.187967835959707,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,1.11598505450025,1.84870251452567,0.865253124247578,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0.202117188958219,0,0.342233301085281,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 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| ||
|short_description=p9@EFEMP1 | |short_description=p9@EFEMP1 | ||
}} | }} |
Latest revision as of 18:20, 17 September 2015
Short description: | p9@EFEMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_EFEMP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -220bp_to_ENST00000394554, uc002rzh.2_5end |
EntrezGene: | EFEMP1 |
HGNC: | 3218 |
UniProt: | Q12805 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 2.55e-11 | 9 |
carbohydrate secreting cell | 2.55e-11 | 9 |
cardiac fibroblast | 8.28e-10 | 6 |
acinar cell of salivary gland | 1.46e-09 | 3 |
preadipocyte of the breast | 1.97e-09 | 3 |
synovial cell | 2.53e-09 | 3 |
fibrocyte | 2.64e-09 | 3 |
tendon cell | 2.64e-09 | 3 |
perirenal adipocyte cell | 8.28e-08 | 1 |
perirenal preadipocyte | 1.07e-07 | 1 |
stromal cell | 1.60e-07 | 28 |
extracellular matrix secreting cell | 7.80e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 8.12e-14 | 2 |
stratified squamous epithelium | 2.53e-09 | 3 |
layer of synovial tissue | 2.53e-09 | 3 |
synovial joint | 2.53e-09 | 3 |
synovial membrane of synovial joint | 2.53e-09 | 3 |
dense regular connective tissue | 2.64e-09 | 3 |
tendon | 2.64e-09 | 3 |
regular connective tissue | 2.64e-09 | 3 |
mammalian vulva | 7.26e-08 | 1 |
external female genitalia | 7.26e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.39e-07 | 1 |