FFCP PHASE1:Hg19::chr1:156785210..156785223,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:156785210..156785223,-
|short_description=p10@SH2D2A
|description=CAGE_peak_10_at_SH2D2A_5end
|association_with_transcript=-7bp_to_ENST00000486350_5end
|E...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9047 | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10821 | |HGNC=10821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000486350_5end | |||
|cluster_id=chr1:156785210..156785223,- | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_10_at_SH2D2A_5end | |||
|id=chr1:156785210..156785223,- | |||
|ontology_enrichment_celltype=CL:0000569!6.04e-10!4;CL:0000011!6.04e-10!4;CL:0002621!2.13e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000317;1.29e-13;2!CL:1000448;1.29e-13;2!CL:0002308;1.29e-13;2!CL:0002140;1.29e-13;2!CL:0002621;1.19e-09;3!CL:0002521;1.60e-09;3!CL:0000569;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.07e-13,2;CL:1000448,1.07e-13,2;CL:0002308,1.07e-13,2;CL:0002140,1.07e-13,2;CL:0002621,1.19e-09,3;CL:0002521,1.67e-09,3;CL:0000569,2.04e-07,4;CL:0000011,2.04e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.86e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;1.01e-09;3 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.01e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0001949!2.13e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.88e-50;2!UBERON:0002757;1.88e-50;2!UBERON:0010134;1.88e-50;2!UBERON:0005408;1.88e-50;2!UBERON:0001899;1.88e-50;2!UBERON:0003296;7.64e-26;4!UBERON:0010133;7.64e-26;4!UBERON:0002784;7.64e-26;4!UBERON:0001894;3.06e-15;7!UBERON:0002419;1.29e-13;2!UBERON:0007771;1.29e-13;2!UBERON:0003297;1.29e-13;2!UBERON:0001821;1.29e-13;2!UBERON:0003487;1.29e-13;2!UBERON:0001820;1.29e-13;2!UBERON:0001949;1.19e-09;3!UBERON:0002190;1.60e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.88e-50,2;UBERON:0002757,1.88e-50,2;UBERON:0010134,1.88e-50,2;UBERON:0005408,1.88e-50,2;UBERON:0001899,1.88e-50,2;UBERON:0003296,7.64e-26,4;UBERON:0010133,7.64e-26,4;UBERON:0002784,7.64e-26,4;UBERON:0001894,3.06e-15,7;UBERON:0006222,3.06e-15,7;UBERON:0002419,1.07e-13,2;UBERON:0007771,1.07e-13,2;UBERON:0003297,1.07e-13,2;UBERON:0001821,1.07e-13,2;UBERON:0003487,1.07e-13,2;UBERON:0001820,1.07e-13,2;UBERON:0005089,1.07e-13,2;UBERON:0005088,1.07e-13,2;UBERON:0001949,1.19e-09,3;UBERON:0002190,1.67e-09,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,3.09217365061275,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.482022059766964,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.804269605718038,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0.15350367472613,0,0,0,0,0,0.826424576804891,0,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,19.0044579692815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0,0.228840068396924,1.20984739010591,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0,0,0.909243296012797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,4.28561468702629,2.35398605553177,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0,0,0,0,0,0,1.30592814099919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,3.09217365061275,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0.482022059766964,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0.301586917234893,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0.93733833986777,0.503946384596579,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0.804269605718038,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72279661398852,0,0,0,0,0.15350367472613,0,0,0,0,0,0.826424576804891,0,0.638063562472921,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0.397429223405979,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,19.0044579692815,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0,0.228840068396924,1.20984739010591,0.15543720058278,0.295710299979268,0,0,0,0,0,0,0,0,0,0.909243296012797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,0,0,0,4.28561468702629,2.35398605553177,0,0.227662191351298,0.177404740325278,0,0,0.135939465953663,0,0,0,0.078493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.849635573439084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SH2D2A | |||
}} | }} |
Latest revision as of 18:22, 17 September 2015
Short description: | p10@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SH2D2A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -7bp_to_ENST00000486350_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.07e-13 | 2 |
epithelial cell of sweat gland | 1.07e-13 | 2 |
epithelial cell of skin gland | 1.07e-13 | 2 |
acinar cell of sebaceous gland | 1.07e-13 | 2 |
gingival epithelial cell | 1.19e-09 | 3 |
subcutaneous fat cell | 1.67e-09 | 3 |
cardiac mesenchymal cell | 2.04e-07 | 4 |
migratory trunk neural crest cell | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.88e-50 | 2 |
regional part of epithalamus | 1.88e-50 | 2 |
secretory circumventricular organ | 1.88e-50 | 2 |
circumventricular organ | 1.88e-50 | 2 |
epithalamus | 1.88e-50 | 2 |
gland of diencephalon | 7.64e-26 | 4 |
neuroendocrine gland | 7.64e-26 | 4 |
regional part of diencephalon | 7.64e-26 | 4 |
diencephalon | 3.06e-15 | 7 |
future diencephalon | 3.06e-15 | 7 |
skin gland | 1.07e-13 | 2 |
epidermis gland | 1.07e-13 | 2 |
gland of integumental system | 1.07e-13 | 2 |
sebaceous gland | 1.07e-13 | 2 |
skin sebaceous gland | 1.07e-13 | 2 |
sweat gland | 1.07e-13 | 2 |
sweat gland placode | 1.07e-13 | 2 |
sebaceous gland placode | 1.07e-13 | 2 |
gingival epithelium | 1.19e-09 | 3 |
subcutaneous adipose tissue | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.01e-09 | 3 |