FFCP PHASE1:Hg19::chr1:156785242..156785247,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9047 | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10821 | |HGNC=10821 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000486350_5end | |association_with_transcript=-39bp_to_ENST00000486350_5end | ||
|cluster_id=chr1:156785242..156785247,- | |||
|coexpression_cluster_id=C137 | |coexpression_cluster_id=C137 | ||
|description=CAGE_peak_19_at_SH2D2A_5end | |description=CAGE_peak_19_at_SH2D2A_5end | ||
|id=chr1:156785242..156785247,- | |id=chr1:156785242..156785247,- | ||
|ontology_enrichment_celltype=CL:0002621!1.48e-10!3;CL:0000313!5.07e-08!1 | |ontology_enrichment_celltype=CL:0002621!1.48e-10!3;CL:0000313!5.07e-08!1 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2513!1.63e-08!1;DOID:0060085!2.69e-08!1;DOID:3165!2.69e-08!1;DOID:0060121!2.69e-08!1;DOID:2438!2.69e-08!1;DOID:4418!2.69e-08!1;DOID:2152!5.07e-08!1 | |ontology_enrichment_disease=DOID:2513!1.63e-08!1;DOID:0060085!2.69e-08!1;DOID:3165!2.69e-08!1;DOID:0060121!2.69e-08!1;DOID:2438!2.69e-08!1;DOID:4418!2.69e-08!1;DOID:2152!5.07e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4556;4.27e-34;3!DOID:3908;4.21e-21;5!DOID:3905;2.19e-12;9!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,4.27e-34,3;DOID:3908,4.21e-21,5;DOID:3905,2.19e-12,9;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.15e-15!2;UBERON:0002757!1.15e-15!2;UBERON:0010134!1.15e-15!2;UBERON:0002784!1.15e-15!2;UBERON:0005408!1.15e-15!2;UBERON:0001899!1.15e-15!2;UBERON:0001949!1.48e-10!3;UBERON:0003296!2.89e-08!4;UBERON:0010133!2.89e-08!4;UBERON:0001301!3.10e-08!1;UBERON:0003112!3.33e-08!1;UBERON:0000032!3.33e-08!1;UBERON:0005253!3.33e-08!1;UBERON:0003128!3.33e-08!1;UBERON:0002241!3.33e-08!1;UBERON:0001703!3.33e-08!1;UBERON:0004761!3.33e-08!1;UBERON:0009617!3.33e-08!1;UBERON:0004911!5.07e-08!1;UBERON:0000014!5.45e-08!4;UBERON:0002363!6.68e-08!1;UBERON:0007647!6.68e-08!1;UBERON:0010115!6.68e-08!1;UBERON:0002022!7.16e-08!1 | |ontology_enrichment_uberon=UBERON:0001905!1.15e-15!2;UBERON:0002757!1.15e-15!2;UBERON:0010134!1.15e-15!2;UBERON:0002784!1.15e-15!2;UBERON:0005408!1.15e-15!2;UBERON:0001899!1.15e-15!2;UBERON:0001949!1.48e-10!3;UBERON:0003296!2.89e-08!4;UBERON:0010133!2.89e-08!4;UBERON:0001301!3.10e-08!1;UBERON:0003112!3.33e-08!1;UBERON:0000032!3.33e-08!1;UBERON:0005253!3.33e-08!1;UBERON:0003128!3.33e-08!1;UBERON:0002241!3.33e-08!1;UBERON:0001703!3.33e-08!1;UBERON:0004761!3.33e-08!1;UBERON:0009617!3.33e-08!1;UBERON:0004911!5.07e-08!1;UBERON:0000014!5.45e-08!4;UBERON:0002363!6.68e-08!1;UBERON:0007647!6.68e-08!1;UBERON:0010115!6.68e-08!1;UBERON:0002022!7.16e-08!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002784;7.14e-26;4!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7 | |||
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|short_description=p19@SH2D2A | |short_description=p19@SH2D2A | ||
}} | }} |
Latest revision as of 18:22, 17 September 2015
Short description: | p19@SH2D2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_SH2D2A_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | -39bp_to_ENST00000486350_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
regional part of diencephalon | 7.14e-26 | 4 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 4.27e-34 | 3 |
non-small cell lung carcinoma | 4.21e-21 | 5 |
lung carcinoma | 2.19e-12 | 9 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |