FFCP PHASE1:Hg19::chr3:2140367..2140374,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152330 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2174 | |||
|TSSclassifier=strong | |||
|UniProt=C9JMQ2 | |||
|association_with_transcript=-122bp_to_ENST00000422330_5end | |||
|cluster_id=chr3:2140367..2140374,+ | |||
|description=CAGE_peak_18_at_CNTN4_5end | |||
|id=chr3:2140367..2140374,+ | |||
|ontology_enrichment_celltype=CL:0002504!6.69e-10!3;CL:1000279!6.69e-10!3;CL:1000280!6.69e-10!3 | |||
|ontology_enrichment_celltype_v019=CL:0000138;2.45e-12;6!CL:0000153;1.12e-08;9!CL:0000447;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,2.45e-12,6;CL:0000138,2.45e-12,6;CL:0000153,1.12e-08,9;CL:0000447,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;2.39e-66;1!DOID:4549;2.39e-66;1!DOID:5861;2.39e-66;1!DOID:6496;2.39e-66;1!DOID:201;2.45e-12;6!DOID:0060100;2.45e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,2.39e-66,1;DOID:4549,2.39e-66,1;DOID:5861,2.39e-66,1;DOID:6496,2.39e-66,1;DOID:201,2.45e-12,6;DOID:0060100,2.45e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.86e-23!115;UBERON:0001049!5.93e-16!57;UBERON:0005068!5.93e-16!57;UBERON:0006241!5.93e-16!57;UBERON:0007135!5.93e-16!57;UBERON:0004733!1.31e-15!12;UBERON:0002028!1.31e-15!12;UBERON:0007277!1.31e-15!12;UBERON:0002616!3.00e-15!59;UBERON:0002346!2.16e-14!90;UBERON:0004732!2.71e-14!13;UBERON:0003075!7.48e-14!86;UBERON:0007284!7.48e-14!86;UBERON:0000955!1.17e-13!69;UBERON:0006238!1.17e-13!69;UBERON:0000153!5.58e-13!129;UBERON:0007811!5.58e-13!129;UBERON:0005743!1.85e-12!86;UBERON:0003076!3.43e-12!15;UBERON:0003057!3.43e-12!15;UBERON:0001017!5.42e-12!82;UBERON:0000073!8.99e-11!94;UBERON:0001016!8.99e-11!94;UBERON:0000033!1.11e-10!123;UBERON:0001872!5.30e-10!5;UBERON:0001896!6.49e-10!3;UBERON:0005290!6.49e-10!3;UBERON:0010096!6.49e-10!3;UBERON:0002020!1.25e-09!34;UBERON:0003528!1.25e-09!34;UBERON:0002298!2.27e-09!8;UBERON:0002619!1.01e-08!22;UBERON:0002680!1.08e-08!9;UBERON:0001895!1.08e-08!9;UBERON:0010092!1.08e-08!9;UBERON:0001869!1.11e-08!32;UBERON:0001155!1.25e-08!9;UBERON:0000063!1.63e-08!97;UBERON:0001893!4.66e-08!34;UBERON:0002780!1.00e-07!41;UBERON:0001890!1.00e-07!41;UBERON:0006240!1.00e-07!41;UBERON:0001950!1.07e-07!20;UBERON:0000956!1.57e-07!25;UBERON:0000203!1.57e-07!25;UBERON:0003080!1.73e-07!42;UBERON:0003056!2.45e-07!61;UBERON:0000924!3.72e-07!173;UBERON:0006601!3.72e-07!173;UBERON:0000341!3.82e-07!2;UBERON:0000059!5.50e-07!11;UBERON:0002148!5.67e-07!2;UBERON:0009662!5.67e-07!2;UBERON:0002791!8.26e-07!33;UBERON:0004121!9.91e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;3.27e-23;3!UBERON:0004755;3.27e-23;3!UBERON:0002037;2.45e-12;6!UBERON:0001155;1.12e-08;9!UBERON:0002680;1.12e-08;9!UBERON:0001895;1.12e-08;9!UBERON:0000059;2.47e-07;11!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,3.27e-23,3;UBERON:0004755,3.27e-23,3;UBERON:0002037,2.74e-12,6;UBERON:0006215,2.74e-12,6;UBERON:0001155,1.04e-08,9;UBERON:0002680,1.21e-08,9;UBERON:0001895,1.21e-08,9;UBERON:0010092,1.21e-08,9;UBERON:0000059,2.32e-07,11;UBERON:0004733,8.38e-07,12;UBERON:0002028,8.38e-07,12;UBERON:0007277,8.38e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0.403599414382095,0,0,0.307240764308458,0,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,1.52581736317083,0.552896299656123,0.295547618953547,0.219385397153973,0,0,0,0,0,0.359030577639089,0.54323685961004,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,1.99052386215701,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85337866052151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.221858103073705,0.124192805882767,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.253663240775627,0,0,0,0.527613733078862,0,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p18@CNTN4 | |||
}} |
Latest revision as of 18:33, 17 September 2015
Short description: | p18@CNTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_CNTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_ENST00000422330_5end |
EntrezGene: | CNTN4 |
HGNC: | 2174 |
UniProt: | C9JMQ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 2.45e-12 | 6 |
chondrocyte | 2.45e-12 | 6 |
GAG secreting cell | 1.12e-08 | 9 |
carbohydrate secreting cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 3.27e-23 | 3 |
skeletal tissue | 3.27e-23 | 3 |
cerebellum | 2.74e-12 | 6 |
rhombic lip | 2.74e-12 | 6 |
colon | 1.04e-08 | 9 |
regional part of metencephalon | 1.21e-08 | 9 |
metencephalon | 1.21e-08 | 9 |
future metencephalon | 1.21e-08 | 9 |
large intestine | 2.32e-07 | 11 |
segmental subdivision of hindbrain | 8.38e-07 | 12 |
hindbrain | 8.38e-07 | 12 |
presumptive hindbrain | 8.38e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 2.39e-66 | 1 |
extraosseous chondrosarcoma | 2.39e-66 | 1 |
myxoid chondrosarcoma | 2.39e-66 | 1 |
extraskeletal myxoid chondrosarcoma | 2.39e-66 | 1 |
connective tissue cancer | 2.45e-12 | 6 |
musculoskeletal system cancer | 2.45e-12 | 6 |