FFCP PHASE1:Hg19::chr12:2079975..2079994,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=775 | |EntrezGene=775 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1390 | |HGNC=1390 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0X0 | |UniProt=F5H0X0 | ||
|association_with_transcript=23bp_to_ENST00000543114_5end | |association_with_transcript=23bp_to_ENST00000543114_5end | ||
|cluster_id=chr12:2079975..2079994,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_6_at_CACNA1C_5end | |description=CAGE_peak_6_at_CACNA1C_5end | ||
|id=chr12:2079975..2079994,+ | |id=chr12:2079975..2079994,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;6.35e-35;4!UBERON:0007284;6.35e-35;4!UBERON:0004140;4.72e-17;1!UBERON:0010227;1.21e-16;1!UBERON:0010226;1.79e-16;1!UBERON:0000358;2.63e-16;1!UBERON:0006603;9.22e-16;65 | |||
|ontology_enrichment_disease=DOID:114!1.16e-17!2;DOID:178!1.32e-09!1;DOID:326!1.32e-09!1;DOID:3978!1.32e-09!1;DOID:3394!1.32e-09!1;DOID:5844!1.32e-09!1;DOID:1287!2.77e-09!4 | |||
|ontology_enrichment_disease_v019=DOID:114;8.57e-32;2!DOID:178;1.21e-16;1!DOID:326;1.21e-16;1!DOID:3978;1.21e-16;1!DOID:3394;1.21e-16;1!DOID:5844;1.21e-16;1!DOID:1287;1.93e-16;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.57e-32,2;DOID:178,1.21e-16,1;DOID:326,1.21e-16,1;DOID:3978,1.21e-16,1;DOID:3394,1.21e-16,1;DOID:5844,1.21e-16,1;DOID:1287,1.93e-16,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!2.37e-25!3;UBERON:0003978!2.58e-25!3;UBERON:0009751!2.58e-25!3;UBERON:0000946!2.58e-25!3;UBERON:0002523!2.58e-25!3;UBERON:0005983!2.58e-25!3;UBERON:0002165!2.58e-25!3;UBERON:0002062!2.58e-25!3;UBERON:0007280!2.58e-25!3;UBERON:0007100!1.84e-23!27;UBERON:0002081!1.26e-17!2;UBERON:0002133!1.62e-17!2;UBERON:0007023!3.72e-17!115;UBERON:0000948!6.35e-12!24;UBERON:0005498!6.35e-12!24;UBERON:0004140!6.35e-12!24;UBERON:0009881!6.35e-12!24;UBERON:0004141!6.35e-12!24;UBERON:0003084!6.35e-12!24;UBERON:0007005!6.35e-12!24;UBERON:0004139!6.35e-12!24;UBERON:0004291!6.35e-12!24;UBERON:0003103!2.43e-10!69;UBERON:0002134!1.03e-09!1;UBERON:0005208!1.03e-09!1;UBERON:0005946!1.03e-09!1;UBERON:0005965!1.03e-09!1;UBERON:0002078!1.03e-09!1;UBERON:0002079!1.21e-09!1;UBERON:0002146!1.43e-09!1;UBERON:0005623!1.43e-09!1;UBERON:0002135!1.56e-09!1;UBERON:0002084!1.69e-09!1;UBERON:0002082!1.69e-09!1;UBERON:0004706!1.69e-09!1;UBERON:0002342!1.90e-09!14;UBERON:0005062!1.90e-09!14;UBERON:0007029!2.35e-09!1;UBERON:0006834!3.00e-09!1;UBERON:0001154!3.83e-09!1;UBERON:0001153!3.83e-09!1;UBERON:0002363!5.72e-09!1;UBERON:0007647!5.72e-09!1;UBERON:0010115!5.72e-09!1;UBERON:0004907!3.14e-07!5;UBERON:0000059!6.05e-07!11;UBERON:0001046!6.67e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;8.85e-49;25!UBERON:0003978;2.83e-46;3!UBERON:0004151;2.83e-46;3!UBERON:0000946;2.83e-46;3!UBERON:0002081;1.17e-31;2!UBERON:0002133;1.73e-31;2!UBERON:0000948;8.03e-25;22!UBERON:0002134;7.57e-17;1!UBERON:0005208;7.57e-17;1!UBERON:0004145;7.57e-17;1!UBERON:0005946;7.57e-17;1!UBERON:0005965;7.57e-17;1!UBERON:0002078;7.57e-17;1!UBERON:0002079;1.21e-16;1!UBERON:0002146;1.21e-16;1!UBERON:0005623;1.21e-16;1!UBERON:0002084;1.79e-16;1!UBERON:0002135;1.79e-16;1!UBERON:0002082;1.79e-16;1!UBERON:0010313;2.08e-14;10!UBERON:0003103;1.65e-11;61!UBERON:0001255;7.49e-09;2!UBERON:0001556;7.49e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.62e-46,3;UBERON:0003978,3.06e-46,3;UBERON:0009751,3.06e-46,3;UBERON:0000946,3.06e-46,3;UBERON:0002523,3.06e-46,3;UBERON:0005983,3.06e-46,3;UBERON:0002165,3.06e-46,3;UBERON:0002062,3.06e-46,3;UBERON:0007280,3.06e-46,3;UBERON:0007100,3.97e-45,27;UBERON:0002081,1.00e-31,2;UBERON:0010227,1.00e-31,2;UBERON:0002133,1.60e-31,2;UBERON:0000948,9.58e-23,24;UBERON:0005498,9.58e-23,24;UBERON:0004140,9.58e-23,24;UBERON:0009881,9.58e-23,24;UBERON:0004141,9.58e-23,24;UBERON:0003084,9.58e-23,24;UBERON:0007005,9.58e-23,24;UBERON:0004139,9.58e-23,24;UBERON:0004291,9.58e-23,24;UBERON:0003103,1.25e-21,68;UBERON:0004797,2.82e-20,7;UBERON:0002134,7.57e-17,1;UBERON:0005208,7.57e-17,1;UBERON:0005946,7.57e-17,1;UBERON:0005965,7.57e-17,1;UBERON:0002078,7.57e-17,1;UBERON:0002079,1.04e-16,1;UBERON:0002146,1.41e-16,1;UBERON:0005623,1.41e-16,1;UBERON:0002135,1.65e-16,1;UBERON:0002084,1.93e-16,1;UBERON:0002082,1.93e-16,1;UBERON:0010226,1.93e-16,1;UBERON:0007023,3.31e-15,114;UBERON:0010313,2.13e-14,10;UBERON:0002342,2.13e-14,10;UBERON:0005062,2.13e-14,10;UBERON:0001009,2.50e-10,112;UBERON:0001255,7.49e-09,2;UBERON:0001556,7.49e-09,2 | |||
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|short_description=p6@CACNA1C | |short_description=p6@CACNA1C | ||
}} | }} |
Latest revision as of 19:00, 17 September 2015
Short description: | p6@CACNA1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CACNA1C_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 23bp_to_ENST00000543114_5end |
EntrezGene: | CACNA1C |
HGNC: | 1390 |
UniProt: | F5H0X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 8.57e-32 | 2 |
vascular disease | 1.21e-16 | 1 |
ischemia | 1.21e-16 | 1 |
extrinsic cardiomyopathy | 1.21e-16 | 1 |
myocardial ischemia | 1.21e-16 | 1 |
myocardial infarction | 1.21e-16 | 1 |
cardiovascular system disease | 1.93e-16 | 4 |