FFCP PHASE1:Hg19::chr19:38755167..38755180,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10653 | |EntrezGene=10653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |HGNC=11247 | ||
|TSSclassifier=strong | |||
|UniProt=O43291 | |UniProt=O43291 | ||
|association_with_transcript=-21bp_to_uc002ohr.1,uc002ohs.1_5end | |association_with_transcript=-21bp_to_uc002ohr.1,uc002ohs.1_5end | ||
|cluster_id=chr19:38755167..38755180,+ | |||
|coexpression_cluster_id=C1820 | |coexpression_cluster_id=C1820 | ||
|description=CAGE_peak_4_at_SPINT2_5end | |description=CAGE_peak_4_at_SPINT2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!8.30e-16!254;CL:0002076!5.36e-13!43;CL:0000223!2.50e-08!59 | |ontology_enrichment_celltype=CL:0000066!8.30e-16!254;CL:0002076!5.36e-13!43;CL:0000223!2.50e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.39e-12;42!CL:1000507;3.24e-08;10!CL:1000494;3.24e-08;10!CL:0002368;2.78e-07;13!CL:0002251;3.18e-07;20 | |ontology_enrichment_celltype_v019=CL:0002076;1.39e-12;42!CL:1000507;3.24e-08;10!CL:1000494;3.24e-08;10!CL:0002368;2.78e-07;13!CL:0002251;3.18e-07;20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.53e-19,253;CL:0002076,2.64e-16,42;CL:0000223,1.84e-10,58;CL:1000507,3.25e-08,10;CL:1000494,3.25e-08,10;CL:0002251,2.51e-07,20;CL:0002368,2.58e-07,13 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!7.06e-11!106;DOID:299!8.07e-09!25 | |ontology_enrichment_disease=DOID:305!7.06e-11!106;DOID:299!8.07e-09!25 | ||
|ontology_enrichment_disease_v019=DOID:299;2.26e-09;25!DOID:1749;2.35e-07;14 | |ontology_enrichment_disease_v019=DOID:299;2.26e-09;25!DOID:1749;2.35e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.46e-13,106;DOID:299,1.23e-09,25;DOID:1749,2.12e-07,14;DOID:0050687,3.03e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!7.38e-10!104;UBERON:0004119!4.41e-08!169;UBERON:0000925!4.41e-08!169;UBERON:0006595!4.41e-08!169;UBERON:0001008!4.33e-07!45;UBERON:0006554!5.19e-07!44 | |ontology_enrichment_uberon=UBERON:0000464!7.38e-10!104;UBERON:0004119!4.41e-08!169;UBERON:0000925!4.41e-08!169;UBERON:0006595!4.41e-08!169;UBERON:0001008!4.33e-07!45;UBERON:0006554!5.19e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.22e-08;30!UBERON:0001008;2.22e-08;30!UBERON:0004211;3.24e-08;10!UBERON:0009773;3.24e-08;10!UBERON:0001231;3.24e-08;10!UBERON:0004810;3.24e-08;10 | |ontology_enrichment_uberon_v019=UBERON:0006554;2.22e-08;30!UBERON:0001008;2.22e-08;30!UBERON:0004211;3.24e-08;10!UBERON:0009773;3.24e-08;10!UBERON:0001231;3.24e-08;10!UBERON:0004810;3.24e-08;10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,3.83e-11,48;UBERON:0006554,4.58e-11,47;UBERON:0004119,1.03e-08,160;UBERON:0000925,1.03e-08,160;UBERON:0006595,1.03e-08,160;UBERON:0004810,3.25e-08,10;UBERON:0005177,1.15e-07,101;UBERON:0005631,1.56e-07,14;UBERON:0000158,1.56e-07,14 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,6.14334841253772,34.8900583986214,10.9220686065086,12.9245819331942,0.247532705920093,0.994192127183747,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0,0,0,0,0.0787107813136792,0.393364276848904,1.15148819429164,3.8704030829019,11.0330546937471,11.1446189947953,11.8321283253372,0,0.568676929949686,1.46800219667424,1.10799081706375,1.40381113229099,2.17010870715852,4.47830948479849,2.59114932815184,3.8636335145128,1.01778767145695,1.13362783106643,1.4555043671269,1.39457422143411,0.822335776043652,1.23882548358041,2.01384674625505,1.7931249457037,2.36482229888585,0.689491361473237,2.5819387343353,2.70852973188684,0.941211697713023,1.09162460023138,1.12361742222542,1.53041946185451,0.641858054152187,0.639337125799041,1.9791078011203,1.79517291859469,1.27867425159808,2.61188314765726,1.13477044938228,0,2.76373531782418,3.12889751052121,0.868755378820466,2.42159801053347,2.20966581592539,0.632924774881769,1.05627643155971,1.70083439972035,1.25795187305026,1.79725809834392,2.25265339262259,0.964353520182481,0.570025487482497,1.19350006319454,0.547992461293902,7.03984977845291,4.91524750135918,6.22656477704488,5.9742231159311,6.4063357925762,4.59801951963587,7.27149360063348,5.72432252721218,3.98449078376614,4.11066032559657,3.05818582500183,6.60856642895129,2.80254281490768,3.16060901730092,2.360517241366,2.35806457649499,4.72883447698871,2.67498392625085,3.2592226663359,3.31413464014313,1.94826728407911,1.11410456885174,2.06224135232386,0.886135578334485,1.08321545506006,4.22701355094728,4.29195846947598,0.493313713811028,0.276350017785848,0.579606171470105,4.00373720537563,3.74557159325598,5.22677619024884,0.906474741580529,2.29932296161153,4.12352934579156,1.26509846009751,2.54852331459277,1.30216690771284,1.90090408889675,3.46322773878877,3.58362511232371,1.24930726552346,2.13099526839615,0,0.80642697289893,0.267440195783507,2.46201486600758,0,0,0.12786256184353,0,0,0.144846518960824,0,0,1.13441780596881,1.99556457716308,2.3715392137144,4.06035134042909,26.5935560453556,18.9100065820059,17.8501066510076,17.9353629418245,12.0991744072167,3.33886874027479,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0.81014194788176,0.357198913136319,0.22452937262617,0.337834441449967,0,0,0,2.63560834872127,0,23.5490788156969,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.302256294682921,0.169560592310488,12.7552163087776,16.6375133560409,9.17774705244812,6.22065901260936,7.1566074893602,5.57730925773688,4.45742536566093,5.80337957013945,5.47466038613745,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,3.81264159483652,0.857839051492628,10.5360273992281,12.3641928583382,10.0528972411631,9.53660985132855,0,0,2.88662684050547,1.85488647960123,1.17408694235822,0.721832238805369,0,0.761016608938393,9.4824527755113,12.8772924314231,4.43190610957315,0,2.0808362720422,15.9347517777521,11.4227847175224,7.23052995936171,8.14982556595919,7.26584846284905,10.3513323374607,0.492663237895943,2.81754988842323,3.93923419527467,2.45003920808834,4.92345490362882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,3.64871341923571,3.01354254859276,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.862510299438069,1.02674429023799,0,0,0,0.335032530668698,0,1.49801404789436,2.99161459204025,4.97298616123243,0,0,0,0.207970861530807,0.713715955188647,0.946214490203608,0.468565659970853,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.391602314925481,0,2.89475236572042,1.07857100409308,1.70764092485511,13.9438682865279,28.2940247167845,11.4908311465279,0,0,0,0.128139149255701,0,0.321707842287215,2.96836132889982,0,0,0,0,0,4.71351853407327,16.6420370351726,27.7163776697048,0,0,0,16.6943856775742,9.16482511542536,21.9617935369519,11.6911379722609,11.3995759204306,0,0,1.0795795805107,0,9.48312531403485,17.5591420849199,16.3120814748825,19.9458242142894,11.6414872455533,1.97333888981341,2.61435451024901,2.56450125116389,1.64007322849853,0.976135183992909,2.57602529119306,0,0,8.61398306994258,7.15066270640173,0,0,0,0,0,0,0.145016693914229,0,0,13.3880781442392,8.07198282933446,7.91198817466422,16.7921916220213,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,7.60154690531545,9.38423185750102,8.71127878890581,3.67160823029439,21.5252686335615,6.73885902670502,25.2755187515905,11.0267232099341,4.05958087385735,0.764637207142375,2.84823593587081,4.04994018278241,3.7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|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,6.14334841253772,34.8900583986214,10.9220686065086,12.9245819331942,0.247532705920093,0.994192127183747,0,0,0,0,0.246242116153576,0,0.313454721478088,0.286235987131057,0,0,0,0,0.0787107813136792,0.393364276848904,1.15148819429164,3.8704030829019,11.0330546937471,11.1446189947953,11.8321283253372,0,0.568676929949686,1.46800219667424,1.10799081706375,1.40381113229099,2.17010870715852,4.47830948479849,2.59114932815184,3.8636335145128,1.01778767145695,1.13362783106643,1.4555043671269,1.39457422143411,0.822335776043652,1.23882548358041,2.01384674625505,1.7931249457037,2.36482229888585,0.689491361473237,2.5819387343353,2.70852973188684,0.941211697713023,1.09162460023138,1.12361742222542,1.53041946185451,0.641858054152187,0.639337125799041,1.9791078011203,1.79517291859469,1.27867425159808,2.61188314765726,1.13477044938228,0,2.76373531782418,3.12889751052121,0.868755378820466,2.42159801053347,2.20966581592539,0.632924774881769,1.05627643155971,1.70083439972035,1.25795187305026,1.79725809834392,2.25265339262259,0.964353520182481,0.570025487482497,1.19350006319454,0.547992461293902,7.03984977845291,4.91524750135918,6.22656477704488,5.9742231159311,6.4063357925762,4.59801951963587,7.27149360063348,5.72432252721218,3.98449078376614,4.11066032559657,3.05818582500183,6.60856642895129,2.80254281490768,3.16060901730092,2.360517241366,2.35806457649499,4.72883447698871,2.67498392625085,3.2592226663359,3.31413464014313,1.94826728407911,1.11410456885174,2.06224135232386,0.886135578334485,1.08321545506006,4.22701355094728,4.29195846947598,0.493313713811028,0.276350017785848,0.579606171470105,4.00373720537563,3.74557159325598,5.22677619024884,0.906474741580529,2.29932296161153,4.12352934579156,1.26509846009751,2.54852331459277,1.30216690771284,1.90090408889675,3.46322773878877,3.58362511232371,1.24930726552346,2.13099526839615,0,0.80642697289893,0.267440195783507,2.46201486600758,0,0,0.12786256184353,0,0,0.144846518960824,0,0,1.13441780596881,1.99556457716308,2.3715392137144,4.06035134042909,26.5935560453556,18.9100065820059,17.8501066510076,17.9353629418245,12.0991744072167,3.33886874027479,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.488124115096339,0,0.81014194788176,0.357198913136319,0.22452937262617,0.337834441449967,0,0,0,2.63560834872127,0,23.5490788156969,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0,0.179389635688862,0.427114777637135,0,0,0.206105058476878,0.515281080091258,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.302256294682921,0.169560592310488,12.7552163087776,16.6375133560409,9.17774705244812,6.22065901260936,7.1566074893602,5.57730925773688,4.45742536566093,5.80337957013945,5.47466038613745,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,3.81264159483652,0.857839051492628,10.5360273992281,12.3641928583382,10.0528972411631,9.53660985132855,0,0,2.88662684050547,1.85488647960123,1.17408694235822,0.721832238805369,0,0.761016608938393,9.4824527755113,12.8772924314231,4.43190610957315,0,2.0808362720422,15.9347517777521,11.4227847175224,7.23052995936171,8.14982556595919,7.26584846284905,10.3513323374607,0.492663237895943,2.81754988842323,3.93923419527467,2.45003920808834,4.92345490362882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,3.64871341923571,3.01354254859276,0,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.862510299438069,1.02674429023799,0,0,0,0.335032530668698,0,1.49801404789436,2.99161459204025,4.97298616123243,0,0,0,0.207970861530807,0.713715955188647,0.946214490203608,0.468565659970853,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.391602314925481,0,2.89475236572042,1.07857100409308,1.70764092485511,13.9438682865279,28.2940247167845,11.4908311465279,0,0,0,0.128139149255701,0,0.321707842287215,2.96836132889982,0,0,0,0,0,4.71351853407327,16.6420370351726,27.7163776697048,0,0,0,16.6943856775742,9.16482511542536,21.9617935369519,11.6911379722609,11.3995759204306,0,0,1.0795795805107,0,9.48312531403485,17.5591420849199,16.3120814748825,19.9458242142894,11.6414872455533,1.97333888981341,2.61435451024901,2.56450125116389,1.64007322849853,0.976135183992909,2.57602529119306,0,0,8.61398306994258,7.15066270640173,0,0,0,0,0,0,0.145016693914229,0,0,13.3880781442392,8.07198282933446,7.91198817466422,16.7921916220213,0.464845549297286,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,7.60154690531545,9.38423185750102,8.71127878890581,3.67160823029439,21.5252686335615,6.73885902670502,25.2755187515905,11.0267232099341,4.05958087385735,0.764637207142375,2.84823593587081,4.04994018278241,3.7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| ||
|short_description=p4@SPINT2 | |short_description=p4@SPINT2 | ||
}} | }} |
Latest revision as of 19:06, 17 September 2015
Short description: | p4@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SPINT2_5end |
Coexpression cluster: | C1820_amniotic_Corneal_Urothelial_smallcell_Alveolar_endometrial_choriocarcinoma |
Association with transcript: | -21bp_to_uc002ohr.1, uc002ohs.1_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.53e-19 | 253 |
endo-epithelial cell | 2.64e-16 | 42 |
endodermal cell | 1.84e-10 | 58 |
kidney tubule cell | 3.25e-08 | 10 |
nephron tubule epithelial cell | 3.25e-08 | 10 |
epithelial cell of alimentary canal | 2.51e-07 | 20 |
respiratory epithelial cell | 2.58e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
renal system | 3.83e-11 | 48 |
urinary system structure | 4.58e-11 | 47 |
endoderm-derived structure | 1.03e-08 | 160 |
endoderm | 1.03e-08 | 160 |
presumptive endoderm | 1.03e-08 | 160 |
nephron tubule epithelium | 3.25e-08 | 10 |
trunk region element | 1.15e-07 | 101 |
extraembryonic membrane | 1.56e-07 | 14 |
membranous layer | 1.56e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.46e-13 | 106 |
adenocarcinoma | 1.23e-09 | 25 |
squamous cell carcinoma | 2.12e-07 | 14 |
cell type cancer | 3.03e-07 | 143 |