FFCP PHASE1:Hg19::chr19:38755184..38755193,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10653 | |EntrezGene=10653 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |HGNC=11247 | ||
|TSSclassifier=strong | |||
|UniProt=O43291 | |UniProt=O43291 | ||
|association_with_transcript=-8bp_to_uc002ohr.1,uc002ohs.1_5end | |association_with_transcript=-8bp_to_uc002ohr.1,uc002ohs.1_5end | ||
|cluster_id=chr19:38755184..38755193,+ | |||
|coexpression_cluster_id=C1820 | |coexpression_cluster_id=C1820 | ||
|description=CAGE_peak_7_at_SPINT2_5end | |description=CAGE_peak_7_at_SPINT2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!9.54e-23!254;CL:0002076!2.12e-14!43;CL:0000223!7.66e-10!59;CL:0002159!1.66e-07!13;CL:0002368!4.48e-07!13 | |ontology_enrichment_celltype=CL:0000066!9.54e-23!254;CL:0002076!2.12e-14!43;CL:0000223!7.66e-10!59;CL:0002159!1.66e-07!13;CL:0002368!4.48e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;8.20e-19;42!CL:0002251;8.82e-11;20!CL:0002368;2.66e-10;13!CL:0002159;6.47e-10;14!CL:1000507;7.55e-10;10!CL:1000494;7.55e-10;10!CL:1000497;1.79e-08;17!CL:0002518;1.79e-08;17!CL:1000449;2.49e-08;15!CL:0000039;1.29e-07;7!CL:0000586;1.29e-07;7!CL:0002202;4.30e-07;9!CL:0002632;4.30e-07;9!CL:0000082;6.35e-07;19 | |ontology_enrichment_celltype_v019=CL:0002076;8.20e-19;42!CL:0002251;8.82e-11;20!CL:0002368;2.66e-10;13!CL:0002159;6.47e-10;14!CL:1000507;7.55e-10;10!CL:1000494;7.55e-10;10!CL:1000497;1.79e-08;17!CL:0002518;1.79e-08;17!CL:1000449;2.49e-08;15!CL:0000039;1.29e-07;7!CL:0000586;1.29e-07;7!CL:0002202;4.30e-07;9!CL:0002632;4.30e-07;9!CL:0000082;6.35e-07;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.26e-38,253;CL:0002076,2.73e-24,42;CL:0000223,1.61e-18,58;CL:0002251,4.12e-11,20;CL:0002368,2.76e-10,13;CL:1000507,6.11e-10,10;CL:1000494,6.11e-10,10;CL:0002159,6.93e-10,14;CL:1000497,1.74e-08,17;CL:0002518,1.74e-08,17;CL:1000449,2.40e-08,15;CL:0000039,1.39e-07,7;CL:0000586,1.39e-07,7;CL:0002202,4.81e-07,9;CL:0002632,4.81e-07,9;CL:0000082,8.90e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000223;6.36e-10;58 | |ontology_enrichment_development_v019=CL:0000223;6.36e-10;58 | ||
|ontology_enrichment_disease=DOID:305!5.04e-15!106;DOID:299!8.93e-10!25;DOID:0050687!4.35e-08!143;DOID:1749!1.65e-07!14 | |ontology_enrichment_disease=DOID:305!5.04e-15!106;DOID:299!8.93e-10!25;DOID:0050687!4.35e-08!143;DOID:1749!1.65e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:299;4.71e-12;25!DOID:1749;1.88e-09;14!DOID:305;1.41e-07;106 | |ontology_enrichment_disease_v019=DOID:299;4.71e-12;25!DOID:1749;1.88e-09;14!DOID:305;1.41e-07;106 | ||
|ontology_enrichment_disease_v019_2=DOID:305,5.54e-22,106;DOID:0050687,2.35e-15,143;DOID:299,2.14e-12,25;DOID:1749,1.72e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000464!4.04e-12!104;UBERON:0004119!1.03e-09!169;UBERON:0000925!1.03e-09!169;UBERON:0006595!1.03e-09!169;UBERON:0006554!3.67e-08!44;UBERON:0000466!7.33e-08!126;UBERON:0001008!1.06e-07!45;UBERON:0005177!1.91e-07!107;UBERON:0002553!3.73e-07!70;UBERON:0005153!3.82e-07!37;UBERON:0005631!4.41e-07!14;UBERON:0000158!4.41e-07!14 | |ontology_enrichment_uberon=UBERON:0000464!4.04e-12!104;UBERON:0004119!1.03e-09!169;UBERON:0000925!1.03e-09!169;UBERON:0006595!1.03e-09!169;UBERON:0006554!3.67e-08!44;UBERON:0000466!7.33e-08!126;UBERON:0001008!1.06e-07!45;UBERON:0005177!1.91e-07!107;UBERON:0002553!3.73e-07!70;UBERON:0005153!3.82e-07!37;UBERON:0005631!4.41e-07!14;UBERON:0000158!4.41e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;5.93e-11;30!UBERON:0001008;5.93e-11;30!UBERON:0004211;7.55e-10;10!UBERON:0009773;7.55e-10;10!UBERON:0001231;7.55e-10;10!UBERON:0004810;7.55e-10;10!UBERON:0004807;2.21e-09;22!UBERON:0005911;4.97e-09;36!UBERON:0006555;2.49e-08;15!UBERON:0004819;2.49e-08;15!UBERON:0001285;2.49e-08;15!UBERON:0007684;2.49e-08;15!UBERON:0005178;1.64e-07;34!UBERON:0002224;1.64e-07;34!UBERON:0005181;3.12e-07;35!UBERON:0005631;4.69e-07;10!UBERON:0000158;4.69e-07;10!UBERON:0004802;6.35e-07;19!UBERON:0000115;6.35e-07;19!UBERON:0002113;9.19e-07;24!UBERON:0011143;9.19e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0006554;5.93e-11;30!UBERON:0001008;5.93e-11;30!UBERON:0004211;7.55e-10;10!UBERON:0009773;7.55e-10;10!UBERON:0001231;7.55e-10;10!UBERON:0004810;7.55e-10;10!UBERON:0004807;2.21e-09;22!UBERON:0005911;4.97e-09;36!UBERON:0006555;2.49e-08;15!UBERON:0004819;2.49e-08;15!UBERON:0001285;2.49e-08;15!UBERON:0007684;2.49e-08;15!UBERON:0005178;1.64e-07;34!UBERON:0002224;1.64e-07;34!UBERON:0005181;3.12e-07;35!UBERON:0005631;4.69e-07;10!UBERON:0000158;4.69e-07;10!UBERON:0004802;6.35e-07;19!UBERON:0000115;6.35e-07;19!UBERON:0002113;9.19e-07;24!UBERON:0011143;9.19e-07;24 | ||
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| ||
|short_description=p7@SPINT2 | |short_description=p7@SPINT2 | ||
}} | }} |
Latest revision as of 19:07, 17 September 2015
Short description: | p7@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SPINT2_5end |
Coexpression cluster: | C1820_amniotic_Corneal_Urothelial_smallcell_Alveolar_endometrial_choriocarcinoma |
Association with transcript: | -8bp_to_uc002ohr.1, uc002ohs.1_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.26e-38 | 253 |
endo-epithelial cell | 2.73e-24 | 42 |
endodermal cell | 1.61e-18 | 58 |
epithelial cell of alimentary canal | 4.12e-11 | 20 |
respiratory epithelial cell | 2.76e-10 | 13 |
kidney tubule cell | 6.11e-10 | 10 |
nephron tubule epithelial cell | 6.11e-10 | 10 |
general ecto-epithelial cell | 6.93e-10 | 14 |
kidney cell | 1.74e-08 | 17 |
kidney epithelial cell | 1.74e-08 | 17 |
epithelial cell of nephron | 2.40e-08 | 15 |
germ line cell | 1.39e-07 | 7 |
germ cell | 1.39e-07 | 7 |
epithelial cell of tracheobronchial tree | 4.81e-07 | 9 |
epithelial cell of lower respiratory tract | 4.81e-07 | 9 |
epithelial cell of lung | 8.90e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.54e-22 | 106 |
cell type cancer | 2.35e-15 | 143 |
adenocarcinoma | 2.14e-12 | 25 |
squamous cell carcinoma | 1.72e-09 | 14 |