FFCP PHASE1:Hg19::chr19:38755203..38755228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10653 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11247 | |||
|TSSclassifier=strong | |||
|UniProt=O43291 | |||
|association_with_transcript=1bp_to_uc002ohr.1,uc002ohs.1_5end | |||
|cluster_id=chr19:38755203..38755228,+ | |||
|coexpression_cluster_id=C1820 | |||
|description=CAGE_peak_1_at_SPINT2_5end | |||
|id=chr19:38755203..38755228,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.03e-16!254;CL:0002076!1.89e-14!43;CL:0000223!2.53e-09!59;CL:0002368!6.97e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;7.21e-13;42!CL:0002251;1.42e-07;20!CL:0002368;2.66e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.32e-19,253;CL:0002076,1.30e-16,42;CL:0000223,1.98e-11,58;CL:0002251,1.45e-07,20;CL:0002368,2.69e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.99e-12!106;DOID:299!5.63e-10!25;DOID:1749!1.03e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:299;1.40e-10;25!DOID:1749;4.90e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.17e-14,106;DOID:299,1.56e-10,25;DOID:1749,4.94e-08,14;DOID:0050687,4.44e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000464!2.49e-12!104;UBERON:0004119!3.48e-10!169;UBERON:0000925!3.48e-10!169;UBERON:0006595!3.48e-10!169;UBERON:0000062!9.40e-09!511;UBERON:0000466!2.03e-08!126;UBERON:0001008!2.58e-08!45;UBERON:0007023!2.86e-08!115;UBERON:0006554!4.19e-08!44;UBERON:0002553!8.25e-08!70;UBERON:0005177!3.91e-07!107;UBERON:0005153!3.92e-07!37;UBERON:0001007!9.23e-07!155;UBERON:0001555!9.23e-07!155;UBERON:0007026!9.23e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.66e-08;30!UBERON:0001008;1.66e-08;30!UBERON:0004921;8.44e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,9.60e-11,48;UBERON:0006554,1.62e-10,47;UBERON:0004119,1.09e-09,160;UBERON:0000925,1.09e-09,160;UBERON:0006595,1.09e-09,160;UBERON:0005177,3.07e-08,101;UBERON:0005153,1.66e-07,37;UBERON:0007023,7.53e-07,114 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,3.00219895059391,0,1.74467704820074,0,0,1.04474251279935,115.494950155709,386.581847056725,184.146076705735,216.288922147332,0.74259811776028,0.994192127183747,0,0,0.730310090387373,0,0.984968464614303,1.42800483870977,0.313454721478088,0.572471974262113,0.410623275218653,0.125542639594803,0,0,0,6.68719270643137,0.767658796194425,19.5068315378256,195.836720814011,222.892379895905,225.54994620174,0,2.13253848731132,5.5784083473621,3.32397245119126,1.60435557976113,3.47217393145363,8.50878802111712,6.47787332037959,3.60605794687861,1.45398238779565,3.02300754951048,0.727752183563449,2.55671940596253,2.87817521615278,3.09706370895104,4.60307827715441,5.12321413058201,7.09446689665756,0.344745680736619,6.45484683583826,5.41705946377367,3.20011977222428,3.0019676506363,2.02251136000576,2.75475503133812,5.1348644332175,3.19668562899521,1.64925650093358,4.3882004676759,7.2458207590558,3.19230162491442,1.70215567407342,3.11411124497787,4.27122730936464,1.5644487552606,4.99534342821768,7.87019353423379,2.94622108790052,4.74693581161327,2.74631872205524,3.18906449947565,5.03180749220102,4.4931452458598,5.40636814229423,3.53596290733576,2.56511469367124,3.18266683518544,3.83594722905731,5.27988733383968,4.36910889009705,8.89509253863555,7.25441378363062,8.80871171479227,6.32227683949932,2.64417949113945,2.86216126360609,1.1384259382189,2.93618594685469,4.58727873750275,3.96513985737078,5.04457706683382,7.90152254325231,4.13090517239049,2.75107533924415,4.5232329779892,3.67810289859492,7.49621213257258,5.6813736688168,3.89653456815823,1.89397776704795,3.53527088969805,2.65840673500345,1.62482318259009,4.35510487067296,3.25148368899696,1.64437904603676,1.10540007114339,0.579606171470105,7.1177550317789,5.88589821797369,7.31748666634838,1.35971211237079,3.06576394881537,3.77990190030893,3.03623630423403,3.50421955756506,3.25541726928209,2.85135613334512,2.55977702432214,3.19966527886046,4.99722906209383,2.8413270245282,1.64225599384209,0.604820229674197,1.60464117470104,4.19990771260117,0,0,0.639312809217652,0.361439152384566,0,0.579386075843295,0,3.89307896242109,3.78139268656271,7.9822583086523,8.0808002837676,25.082492957812,430.961326050077,248.796361108352,129.494410068219,116.666923990509,95.7297315735829,9.53962497221368,7.43593384014166,11.1437250398869,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,1.95249646038536,0,0,1.7859945656816,0.898117490504679,1.0135033243499,1.53316637465883,0,0.183201743930407,3.9534125230819,3.87780264148325,279.536287423365,1.49091585508596,0.886413581652058,0.132409180813219,0.860509862246441,1.06400514659507,3.92474320099615,0,0.49333509683432,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0,0,5.70471821544449,0.149448680551801,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0.226864366320042,0.538168907066586,1.06778694409284,0,0,0.206105058476878,0,1.11670113798954,0,0.0974370051611986,0,0.644349290496095,0,1.42003837006646,1.10827308050404,0,269.019107603309,155.465288736776,160.897378013231,50.1311932192637,42.9396449361612,48.4528741765892,40.1168282909484,72.1637633504297,39.0525774211138,6.25798129319264,3.85944562915731,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,0,1.26755034821831,0,1.77236972004421,0,142.051646517296,3.08822058537346,168.356937816832,175.346735081887,165.470688589544,147.030450911745,0,0,2.88662684050547,7.07175470347969,2.58299127318808,1.58803092537181,2.77791307545966,2.28304982681518,135.915156448995,126.197465827946,10.0948972495833,0.702012795417713,4.16167254408439,288.700208679273,242.398210990954,162.332486342533,159.682845979178,161.883103752277,189.007660828449,3.94130590316755,11.2701995536929,4.56121854189699,5.76479813667846,8.71072790642022,0.126995788584338,0,0,29.0823158238599,0,0,0,0,2.1798003441664,0.07333828582095,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399891964728228,9.72990245129524,4.01805673145701,4.21667878966063,1.19812427745791,4.59447743336456,0,0,0,0,0,1.37921532141349,0.431255149719035,2.95188983443421,0,0,2.31986643833309,1.67516265334349,0.637938751653163,4.49404214368309,0,3.31532410748828,0,1.00034104211935,0,1.03985430765404,0.535286966391485,1.57702415033935,0.585707074963566,0,0,5.17365356462525,0.664225598535437,0.184369168541703,0.0868836144680828,0.979005787313703,0,3.10152039184331,4.31428401637234,2.77491650288955,89.1195060052003,196.393818622387,87.3907947722776,0,0.920771839728375,0.280660094433074,0.640695746278505,0.511707249066704,0.64341568457443,4.45254199334973,0,0,0,0,0,161.951662452774,296.348563108255,333.056936981137,0.114814448164607,0,1.04899531967539,154.310267614335,87.7974842990328,95.6906718395763,84.7607502988912,65.1253550269043,5.68666920354483,0.680374821106063,4.53423423814493,9.25363516141736,39.8291263189464,87.7957104245993,161.591557110554,284.227995053624,83.5052835113725,3.06963827304308,5.22870902049801,3.84675187674584,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| |||
|short_description=p1@SPINT2 | |||
}} |
Latest revision as of 19:07, 17 September 2015
Short description: | p1@SPINT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPINT2_5end |
Coexpression cluster: | C1820_amniotic_Corneal_Urothelial_smallcell_Alveolar_endometrial_choriocarcinoma |
Association with transcript: | 1bp_to_uc002ohr.1, uc002ohs.1_5end |
EntrezGene: | SPINT2 |
HGNC: | 11247 |
UniProt: | O43291 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.32e-19 | 253 |
endo-epithelial cell | 1.30e-16 | 42 |
endodermal cell | 1.98e-11 | 58 |
epithelial cell of alimentary canal | 1.45e-07 | 20 |
respiratory epithelial cell | 2.69e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
renal system | 9.60e-11 | 48 |
urinary system structure | 1.62e-10 | 47 |
endoderm-derived structure | 1.09e-09 | 160 |
endoderm | 1.09e-09 | 160 |
presumptive endoderm | 1.09e-09 | 160 |
trunk region element | 3.07e-08 | 101 |
epithelial bud | 1.66e-07 | 37 |
adult organism | 7.53e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.17e-14 | 106 |
adenocarcinoma | 1.56e-10 | 25 |
squamous cell carcinoma | 4.94e-08 | 14 |
cell type cancer | 4.44e-07 | 143 |