FFCP PHASE2:Hg19::chr2:5832493..5832507,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6664 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11191 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6664 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11191 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P35716 | ||
|association_with_transcript=-291bp_to_ENST00000322002,NM_003108,uc002qyj.2_5end | |association_with_transcript=-291bp_to_ENST00000322002,NM_003108,uc002qyj.2_5end | ||
|cluster_id=chr2:5832493..5832507,+ | |cluster_id=chr2:5832493..5832507,+ |
Latest revision as of 19:12, 17 September 2015
Short description: | p2@SOX11 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SOX11_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -291bp_to_ENST00000322002, NM_003108, uc002qyj.2_5end |
EntrezGene: | SOX11 |
HGNC: | 11191 |
UniProt: | P35716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SOX11 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neurectodermal cell | 3.19e-28 | 59 |
neural cell | 3.21e-24 | 25 |
ectodermal cell | 4.96e-21 | 72 |
migratory neural crest cell | 6.45e-18 | 41 |
neuronal stem cell | 7.95e-14 | 8 |
neuron associated cell | 4.41e-13 | 17 |
neuron associated cell (sensu Vertebrata) | 4.41e-13 | 17 |
neuron | 8.23e-11 | 6 |
neuroblast | 8.23e-11 | 6 |
electrically signaling cell | 8.23e-11 | 6 |
Showing 1 to 10 of 22 entries
Ontology term | p-value | n |
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ectoderm-derived structure | 2.34e-17 | 171 |
ectoderm | 2.34e-17 | 171 |
presumptive ectoderm | 2.34e-17 | 171 |
nervous system | 1.15e-14 | 89 |
central nervous system | 9.49e-12 | 81 |
sympathetic nervous system | 4.48e-09 | 5 |
autonomic nervous system | 4.48e-09 | 5 |
neurectoderm | 3.82e-08 | 86 |
pigment epithelium of eye | 4.18e-08 | 11 |
embryo | 2.06e-07 | 592 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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neuroectodermal tumor | 9.98e-13 | 10 |
neuroendocrine tumor | 1.96e-07 | 6 |
germ cell and embryonal cancer | 7.96e-07 | 22 |
germ cell cancer | 7.96e-07 | 22 |
Showing 1 to 4 of 4 entries